Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p023447 Quercus lobata HOM05D015073 ORTHO05D011972 1.7e-70 269.2 138 100.0
QL10p054862 Quercus lobata HOM05D015073 ORTHO05D011972 3.4e-42 175.3 175 59.4
TPR.G38290 Trifolium pratense HOM05D010769 ORTHO05D011972 2.3e-14 82.8 61 62.3
RcHm_v2.0_Chr5g0027461 Rosa chinensis HOM05D003921 ORTHO05D017011 3.3e-13 79.0 119 42.0
Psat3g156560 Pisum sativum HOM05D002203 ORTHO05D002647 1.2e-12 77.0 53 66.0
TAR633G0927 Trochodendron aralioides HOM05D002203 ORTHO05D002647 4.7e-12 75.1 47 78.7
C03p63390 Brassica napus HOM05D002203 ORTHO05D011972 5.2e-11 71.6 65 58.5
BolC3t18592H Brassica oleracea HOM05D002203 ORTHO05D011972 5.2e-11 71.6 65 58.5
BcaC05g25934 Brassica carinata HOM05D002960 ORTHO05D011972 6.8e-11 71.2 59 59.3
C05p18870 Brassica napus HOM05D002203 ORTHO05D011972 6.8e-11 71.2 59 59.3
RcHm_v2.0_Chr3g0488471 Rosa chinensis HOM05D002203 ORTHO05D011972 2.0e-10 69.7 73 47.9
Cpa.g.sc147.32 Carica papaya HOM05D002203 ORTHO05D002647 7.5e-10 67.8 44 77.3
EL10Ac7g17234 Beta vulgaris HOM05D002203 ORTHO05D002647 1.3e-09 67.0 69 59.4
Psat5g011720 Pisum sativum HOM05D015073 ORTHO05D011972 1.7e-09 66.6 47 72.3
Glyma.07G093200 Glycine max HOM05D002203 ORTHO05D011972 2.9e-09 65.9 75 49.3
MD13G1188000 Malus domestica HOM05D002203 ORTHO05D002647 3.7e-09 65.5 42 76.2
Peaxi162Scf00783g00225 Petunia axillaris HOM05D002203 ORTHO05D002647 3.7e-09 65.5 41 78.0
TPR.G18542 Trifolium pratense HOM05D002203 ORTHO05D011972 4.9e-09 65.1 46 67.4
Sabra10G0052500 Salix brachista HOM05D002203 ORTHO05D002647 1.4e-08 63.5 40 70.0
Phvul.001G151300 Phaseolus vulgaris HOM05D002203 ORTHO05D002647 3.2e-08 62.4 43 67.4
TPR.G14817 Trifolium pratense HOM05D010769 ORTHO05D011972 4.1e-08 62.0 49 53.1
TPR.G7502 Trifolium pratense HOM05D010769 ORTHO05D011972 7.1e-08 61.2 49 53.1
TPR.G39373 Trifolium pratense HOM05D010769 ORTHO05D011972 1.2e-07 60.5 49 51.0
VMungo0770G0001 Vigna mungo HOM05D010769 ORTHO05D011972 1.2e-07 60.5 67 44.8
VMungo0251G1971 Vigna mungo HOM05D010769 ORTHO05D011972 2.1e-07 59.7 42 59.5
Lalb_Chr01g0020141 Lupinus albus HOM05D002203 ORTHO05D002647 3.5e-07 58.9 72 48.6
AUR62038091 Chenopodium quinoa HOM05D002203 ORTHO05D002647 1.0e-06 57.4 41 61.0
RcHm_v2.0_Chr6g0244361 Rosa chinensis HOM05D002203 ORTHO05D011972 1.3e-06 57.0 50 56.0
Lj1g0011876 Lotus japonicus HOM05D002203 ORTHO05D002647 1.7e-06 56.6 44 56.8
MD03G1264400 Malus domestica HOM05D002203 ORTHO05D002647 1.7e-06 56.6 37 75.7
Nitab4.5_0002196g0010 Nicotiana tabacum HOM05D000234 ORTHO05D004385 2.3e-06 56.2 38 73.7
FAN20G0024 Fragaria x ananassa HOM05D002203 ORTHO05D002647 5.1e-06 55.1 36 72.2
FAN24G1552 Fragaria x ananassa HOM05D002203 ORTHO05D002647 5.1e-06 55.1 36 72.2
FAN27G1395 Fragaria x ananassa HOM05D002203 ORTHO05D002647 5.1e-06 55.1 36 72.2


User provided reference genes

Program Settings