Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p021780 Quercus lobata HOM05D003870 ORTHO05D004567 5.3e-75 284.3 144 100.0
Cfa002093 Carpinus fangiana HOM05D003870 ORTHO05D004567 2.8e-68 261.9 144 90.3
Haze_16364 Corylus avellana HOM05D003870 ORTHO05D004567 2.8e-68 261.9 144 90.3
VMungo0331G0764 Vigna mungo HOM05D003870 ORTHO05D004567 1.8e-67 259.2 144 89.6
Manes.11G038100 Manihot esculenta HOM05D003870 ORTHO05D004567 2.4e-67 258.8 144 88.9
CiPaw.01G235900 Carya illinoinensis HOM05D003870 ORTHO05D004567 5.4e-67 257.7 144 88.9
CANSAT56G1465 Cannabis sativa HOM05D003870 ORTHO05D004567 9.1e-67 256.9 144 89.6
Manes.04G129900 Manihot esculenta HOM05D003870 ORTHO05D004567 1.2e-66 256.5 144 88.2
Ciclev10026722m.g Citrus clementina HOM05D003870 ORTHO05D004567 1.6e-66 256.1 144 88.2
Dinv38024 Davidia involucrata HOM05D003870 ORTHO05D004567 2.7e-66 255.4 144 86.8
Glyma.07G019700 Glycine max HOM05D003870 ORTHO05D004567 4.5e-66 254.6 144 87.5
Phvul.010G148800 Phaseolus vulgaris HOM05D003870 ORTHO05D004567 7.7e-66 253.8 144 88.2
Potri.003G052500 Populus trichocarpa HOM05D003870 ORTHO05D004567 1.3e-65 253.1 144 86.8
Aqoxy7G01609 Aquilegia oxysepala HOM05D003870 ORTHO05D004567 1.7e-65 252.7 144 86.1
Glyma.08G204800 Glycine max HOM05D003870 ORTHO05D004567 2.9e-65 251.9 144 86.1
MD09G1209500 Malus domestica HOM05D003870 ORTHO05D004567 2.9e-65 251.9 144 86.1
Nn2g11696 Nelumbo nucifera HOM05D003870 ORTHO05D004567 5.0e-65 251.1 144 86.1
Prupe.3G067400 Prunus persica HOM05D003870 ORTHO05D004567 8.6e-65 250.4 144 86.1
Nn3g18073 Nelumbo nucifera HOM05D003870 ORTHO05D004567 1.1e-64 250.0 145 86.9
RcHm_v2.0_Chr2g0138931 Rosa chinensis HOM05D003870 ORTHO05D004567 1.9e-64 249.2 144 85.4
FAN05G2130 Fragaria x ananassa HOM05D003870 ORTHO05D004567 2.5e-64 248.8 144 86.1
FAN14G2389 Fragaria x ananassa HOM05D003870 ORTHO05D004567 3.3e-64 248.4 144 86.1
ClCG07G013150 Citrullus lanatus HOM05D003870 ORTHO05D004567 4.2e-64 248.1 144 84.7
Sed0024359 Sechium edule HOM05D003870 ORTHO05D004567 4.2e-64 248.1 144 85.4
FAN02G0928 Fragaria x ananassa HOM05D003870 ORTHO05D004567 5.5e-64 247.7 144 86.1
PGR102G1204 Punica granatum HOM05D003870 ORTHO05D004567 7.2e-64 247.3 144 85.4
arahy.Tifrunner.gnm1.ann1.71HCYD Arachis hypogaea HOM05D003870 ORTHO05D004567 9.5e-64 246.9 144 84.7
arahy.Tifrunner.gnm1.ann1.YBSA05 Arachis hypogaea HOM05D003870 ORTHO05D004567 9.5e-64 246.9 144 84.7
Duzib235G0817 Durio zibethinus HOM05D003870 ORTHO05D004567 1.2e-63 246.5 144 85.4
Eucgr.F03038 Eucalyptus grandis HOM05D003870 ORTHO05D004567 1.6e-63 246.1 143 84.6
PSO832G3918 Papaver somniferum HOM05D003870 ORTHO05D004567 1.6e-63 246.1 145 84.8
Thecc.06G092200 Theobroma cacao HOM05D003870 ORTHO05D004567 1.6e-63 246.1 144 84.7
PSO782G2129 Papaver somniferum HOM05D003870 ORTHO05D004567 2.1e-63 245.7 145 84.8
Psat5g298080 Pisum sativum HOM05D003870 ORTHO05D004567 2.1e-63 245.7 146 82.9
CsaV3_3G025000 Cucumis sativus L. HOM05D003870 ORTHO05D004567 2.8e-63 245.4 144 84.0
FvH4_6g31740 Fragaria vesca HOM05D003870 ORTHO05D004567 2.8e-63 245.4 144 85.4
Gohir.A05G131700 Gossypium hirsutum HOM05D003870 ORTHO05D004567 2.8e-63 245.4 144 85.4
FAN09G1730 Fragaria x ananassa HOM05D003870 ORTHO05D004567 3.6e-63 245.0 144 84.7
MELO3C012971.2 Cucumis melo HOM05D003870 ORTHO05D004567 4.7e-63 244.6 144 84.0
Gohir.D05G131200 Gossypium hirsutum HOM05D003870 ORTHO05D004567 4.7e-63 244.6 144 84.7
Gorai.009G134900 Gossypium raimondii HOM05D003870 ORTHO05D004567 4.7e-63 244.6 144 84.7
Sabra03G0026800 Salix brachista HOM05D003870 ORTHO05D004567 6.1e-63 244.2 144 84.0
Cpa.g.sc1182.1 Carica papaya HOM05D003870 ORTHO05D004567 8.0e-63 243.8 144 84.0
TAR626G1423 Trochodendron aralioides HOM05D003870 ORTHO05D004567 8.0e-63 243.8 144 84.0
COL.COLO4_30434 Corchorus olitorius HOM05D003870 ORTHO05D004567 1.0e-62 243.4 144 85.4
TAR383G0495 Trochodendron aralioides HOM05D003870 ORTHO05D004567 1.4e-62 243.0 144 84.0
Lj3g0012525 Lotus japonicus HOM05D003870 ORTHO05D004567 2.3e-62 242.3 148 83.8
Sed0005638 Sechium edule HOM05D003870 ORTHO05D004567 2.3e-62 242.3 144 83.3
GSVIVG01017071001 Vitis vinifera HOM05D003870 ORTHO05D004567 2.3e-62 242.3 144 83.3
TAR636G2531 Trochodendron aralioides HOM05D003870 ORTHO05D004567 3.0e-62 241.9 144 84.0
CSS0035581 Camellia sinensis var. sinensis HOM05D003870 ORTHO05D004567 5.2e-62 241.1 144 82.6
CiPaw.02G148900 Carya illinoinensis HOM05D003870 ORTHO05D004567 5.2e-62 241.1 144 84.0
Medtr2g101820 Medicago truncatula HOM05D003870 ORTHO05D004567 5.2e-62 241.1 147 83.0
Lalb_Chr14g0373231 Lupinus albus HOM05D003870 ORTHO05D004567 1.2e-61 240.0 144 84.7
Hma1.2p1_1195F.1_g265780 Hydrangea macrophylla HOM05D003870 ORTHO05D004567 1.5e-61 239.6 145 82.8
Hma1.2p1_3147F.1_g333153 Hydrangea macrophylla HOM05D003870 ORTHO05D004567 1.5e-61 239.6 145 82.8
MBI01_g07179_MAGBIO Magnolia biondii HOM05D003870 ORTHO05D004567 2.0e-61 239.2 144 81.2
DCAR_023061 Daucus carota HOM05D003870 ORTHO05D004567 3.4e-61 238.4 144 81.9
Duzib160G0587 Durio zibethinus HOM05D003870 ORTHO05D004567 3.4e-61 238.4 144 83.3
Nitab4.5_0001315g0130 Nicotiana tabacum HOM05D003870 ORTHO05D004567 3.4e-61 238.4 145 82.8
Glyma.15G016300 Glycine max HOM05D003870 ORTHO05D004567 4.4e-61 238.0 144 82.6
VMungo1080G1700 Vigna mungo HOM05D003870 ORTHO05D004567 4.4e-61 238.0 138 84.8
Migut.D01017 Erythranthe guttata HOM05D003870 ORTHO05D004567 7.5e-61 237.3 144 79.9
TWI12G1021 Tripterygium wilfordii HOM05D003870 ORTHO05D004567 9.8e-61 236.9 144 82.6
CSS0004601 Camellia sinensis var. sinensis HOM05D003870 ORTHO05D004567 1.3e-60 236.5 144 81.9
CSS0022866 Camellia sinensis var. sinensis HOM05D003870 ORTHO05D004567 1.3e-60 236.5 144 81.9
Ah.01g021620 Amaranthus hybridus HOM05D003870 ORTHO05D004567 2.2e-60 235.7 144 81.2
Nitab4.5_0000351g0060 Nicotiana tabacum HOM05D003870 ORTHO05D004567 4.9e-60 234.6 145 82.1
A06p01960 Brassica napus HOM05D003870 ORTHO05D004567 6.3e-60 234.2 145 81.4
BraA06t23412Z Brassica rapa HOM05D003870 ORTHO05D004567 6.3e-60 234.2 145 81.4
BraA08t32272Z Brassica rapa HOM05D003870 ORTHO05D004567 6.3e-60 234.2 145 82.1
Migut.I00942 Erythranthe guttata HOM05D003870 ORTHO05D004567 6.3e-60 234.2 144 77.8
Nitab4.5_0002859g0140 Nicotiana tabacum HOM05D003870 ORTHO05D004567 6.3e-60 234.2 145 81.4
AT1G52230 Arabidopsis thaliana HOM05D003870 ORTHO05D004567 8.3e-60 233.8 145 80.7
AUR62011659 Chenopodium quinoa HOM05D003870 ORTHO05D004567 8.3e-60 233.8 144 81.9
Lalb_Chr25g0279971 Lupinus albus HOM05D003870 ORTHO05D004567 8.3e-60 233.8 145 80.0
BcaC01g01311 Brassica carinata HOM05D003870 ORTHO05D004567 1.1e-59 233.4 145 81.4
BcaC01g01313 Brassica carinata HOM05D003870 ORTHO05D004567 1.1e-59 233.4 145 81.4
A08p02270 Brassica napus HOM05D003870 ORTHO05D004567 1.1e-59 233.4 145 82.1
Lsat_1_v5_gn_5_130901 Lactuca sativa HOM05D003870 ORTHO05D004567 1.4e-59 233.0 144 81.2
Sp1g38770 Schrenkiella parvula HOM05D003870 ORTHO05D004567 1.4e-59 233.0 145 80.7
PGSC0003DMG400002626 Solanum tuberosum HOM05D003870 ORTHO05D004567 1.4e-59 233.0 145 82.1
Solyc03g120640.3 Solanum lycopersicum HOM05D003870 ORTHO05D004567 1.8e-59 232.6 145 82.1
BcaB04g18888 Brassica carinata HOM05D003870 ORTHO05D004567 2.4e-59 232.3 145 80.0
C06p07460 Brassica napus HOM05D003870 ORTHO05D004567 2.4e-59 232.3 145 80.7
BolC6t35835H Brassica oleracea HOM05D003870 ORTHO05D004567 2.4e-59 232.3 145 80.7
ECA234G4669 Erigeron canadensis HOM05D003870 ORTHO05D004567 4.1e-59 231.5 141 80.9
Sp3g14500 Schrenkiella parvula HOM05D003870 ORTHO05D004567 4.1e-59 231.5 145 79.3
Sopen06g024910 Solanum pennellii HOM05D003870 ORTHO05D004567 4.1e-59 231.5 145 80.0
A05p33360 Brassica napus HOM05D003870 ORTHO05D004567 7.0e-59 230.7 145 79.3
BraA05t22161Z Brassica rapa HOM05D003870 ORTHO05D004567 7.0e-59 230.7 145 79.3
Nitab4.5_0003418g0030 Nicotiana tabacum HOM05D003870 ORTHO05D004567 7.0e-59 230.7 145 80.7
C03p90500 Brassica napus HOM05D003870 ORTHO05D004567 9.2e-59 230.3 145 80.0
BolC3t21374H Brassica oleracea HOM05D003870 ORTHO05D004567 9.2e-59 230.3 145 80.0
Carub.0001s4120 Capsella rubella HOM05D003870 ORTHO05D004567 9.2e-59 230.3 145 80.0
SGA_v2.0_scaffold5G02558 Striga asiatica HOM05D003870 ORTHO05D004567 9.2e-59 230.3 144 78.5
BcaC05g28907 Brassica carinata HOM05D003870 ORTHO05D004567 1.2e-58 229.9 145 79.3
C05p50360 Brassica napus HOM05D003870 ORTHO05D004567 1.2e-58 229.9 145 79.3
BolC5t33784H Brassica oleracea HOM05D003870 ORTHO05D004567 1.2e-58 229.9 145 79.3
CAN.G438.27 Capsicum annuum HOM05D003870 ORTHO05D004567 1.2e-58 229.9 145 80.7
Nitab4.5_0018837g0020 Nicotiana tabacum HOM05D003870 ORTHO05D004567 1.2e-58 229.9 145 80.7
Peaxi162Scf00015g00032 Petunia axillaris HOM05D003870 ORTHO05D004567 1.2e-58 229.9 145 80.0
PGSC0003DMG400016504 Solanum tuberosum HOM05D003870 ORTHO05D004567 1.2e-58 229.9 145 79.3
CAN.G1152.5 Capsicum annuum HOM05D003870 ORTHO05D004567 1.6e-58 229.6 145 79.3
CARHR091300 Cardamine hirsuta HOM05D003870 ORTHO05D004567 1.6e-58 229.6 145 79.3
Thhalv10011814m.g Eutrema salsugineum HOM05D003870 ORTHO05D004567 1.6e-58 229.6 145 79.3
MSTRG.11054 Avicennia marina HOM05D003870 ORTHO05D004567 2.0e-58 229.2 144 77.8
Aa31LG10G2680 Aethionema arabicum HOM05D003870 ORTHO05D004567 2.7e-58 228.8 145 79.3
AT3G16140 Arabidopsis thaliana HOM05D003870 ORTHO05D004567 2.7e-58 228.8 145 79.3
BcaB06g25707 Brassica carinata HOM05D003870 ORTHO05D004567 2.7e-58 228.8 145 78.6
Eucgr.J02958 Eucalyptus grandis HOM05D003870 ORTHO05D004567 2.7e-58 228.8 145 81.4
Solyc06g066640.3 Solanum lycopersicum HOM05D003870 ORTHO05D004567 3.5e-58 228.4 145 78.6
Oeu029644.1 Olea europaea HOM05D003870 ORTHO05D004567 4.5e-58 228.0 144 77.8
PGSC0003DMG400007571 Solanum tuberosum HOM05D003870 ORTHO05D004567 4.5e-58 228.0 145 81.4
TWI75G1362 Tripterygium wilfordii HOM05D003870 ORTHO05D004567 4.5e-58 228.0 145 81.4
AL3G28820 Arabidopsis lyrata HOM05D003870 ORTHO05D004567 5.9e-58 227.6 145 79.3
Thhalv10021715m.g Eutrema salsugineum HOM05D003870 ORTHO05D004567 5.9e-58 227.6 145 78.6
Glyma.13G357300 Glycine max HOM05D003870 ORTHO05D004567 5.9e-58 227.6 137 83.9
HanXRQChr12g0360771 Helianthus annuus HOM05D003870 ORTHO05D004567 7.8e-58 227.3 144 77.1
Solyc12g044280.2 Solanum lycopersicum HOM05D003870 ORTHO05D004567 1.0e-57 226.9 144 79.9
Sopen12g022520 Solanum pennellii HOM05D003870 ORTHO05D004567 1.0e-57 226.9 144 79.9
EL10Ac9g22029 Beta vulgaris HOM05D003870 ORTHO05D004567 2.3e-57 225.7 144 78.5
CARHR042360 Cardamine hirsuta HOM05D003870 ORTHO05D004567 2.3e-57 225.7 145 79.3
BraA01t03856Z Brassica rapa HOM05D003870 ORTHO05D004567 2.9e-57 225.3 145 77.9
Peaxi162Scf00034g00513 Petunia axillaris HOM05D003870 ORTHO05D004567 3.8e-57 224.9 143 81.1
Carub.0003s1588 Capsella rubella HOM05D003870 ORTHO05D004567 6.6e-57 224.2 145 77.2
Cc04_g03050 Coffea canephora HOM05D003870 ORTHO05D004567 8.6e-57 223.8 144 78.5
Rhsim08G0223300 Rhododendron simsii HOM05D003870 ORTHO05D004567 8.6e-57 223.8 145 77.9
vmacro18888 Vaccinium macrocarpon HOM05D003870 ORTHO05D004567 8.6e-57 223.8 145 79.3
vmacro16969 Vaccinium macrocarpon HOM05D003870 ORTHO05D004567 1.1e-56 223.4 144 77.8
Actinidia21679 Actinidia chinensis HOM05D003870 ORTHO05D004567 1.5e-56 223.0 144 77.8
Lsat_1_v5_gn_1_35241 Lactuca sativa HOM05D003870 ORTHO05D004567 1.5e-56 223.0 144 79.2
A01p37960 Brassica napus HOM05D003870 ORTHO05D004567 1.9e-56 222.6 145 77.2
THA.LOC104817982 Tarenaya hassleriana HOM05D003870 ORTHO05D004567 3.3e-56 221.9 145 78.6
CDE02G4568 Ceratophyllum demersum HOM05D003870 ORTHO05D004567 4.3e-56 221.5 145 74.5
BcaB04g17164 Brassica carinata HOM05D003870 ORTHO05D004567 5.6e-56 221.1 143 77.6
THA.LOC104810527 Tarenaya hassleriana HOM05D003870 ORTHO05D004567 1.2e-55 219.9 146 79.5
SGA_v2.0_scaffold69G23361 Striga asiatica HOM05D003870 ORTHO05D004567 1.0e-54 216.9 145 75.2
Rhsim12G0200100 Rhododendron simsii HOM05D003870 ORTHO05D004567 1.8e-54 216.1 144 76.4
unitig_0.g2124 Utricularia gibba HOM05D003870 ORTHO05D004567 1.8e-54 216.1 144 74.3
Oeu024071.1 Olea europaea HOM05D003870 ORTHO05D004567 6.8e-54 214.2 135 76.3
ATR0315G019 Amborella trichopoda HOM05D003870 ORTHO05D004567 3.4e-53 211.8 144 75.0
CDE04G3706 Ceratophyllum demersum HOM05D003870 ORTHO05D004567 3.4e-53 211.8 145 71.7
Os05g0560000 Oryza sativa ssp. japonica HOM05D003870 ORTHO05D004567 6.4e-52 207.6 142 72.5
Hund00643 Selenicereus undatus HOM05D003870 ORTHO05D004567 8.3e-52 207.2 146 74.7
Sc15g0001350 Simmondsia chinensis HOM05D003870 ORTHO05D004567 3.2e-51 205.3 145 76.6
Zm00001eb295610 Zea mays HOM05D003870 ORTHO05D004567 4.1e-51 204.9 145 73.8
TPR.G37200 Trifolium pratense HOM05D003870 ORTHO05D004567 1.2e-50 203.4 146 74.0
Nitab4.5_0001968g0090 Nicotiana tabacum HOM05D003870 ORTHO05D004567 2.7e-50 202.2 145 73.8
Actinidia32731 Actinidia chinensis HOM05D003870 ORTHO05D004567 7.8e-50 200.7 129 78.3
AUR62016482 Chenopodium quinoa HOM05D003870 ORTHO05D004567 1.9e-48 196.1 144 72.2
Sopen00g011820 Solanum pennellii HOM05D003870 ORTHO05D004567 2.8e-47 192.2 102 90.2
AL1G60400 Arabidopsis lyrata HOM05D003870 ORTHO05D004567 6.8e-46 187.6 102 87.3
BcaC08g43379 Brassica carinata HOM05D003870 ORTHO05D004567 3.7e-44 181.8 100 87.0
SEGI_14279 Sequoiadendron giganteum HOM05D003870 ORTHO05D004567 2.3e-41 172.6 142 63.4
HPP92_021482 Vanilla planifolia HOM05D003870 ORTHO05D004567 1.1e-38 163.7 139 66.9
Duzib192G0641 Durio zibethinus HOM05D003870 ORTHO05D004567 3.1e-38 162.2 98 82.7
Pp3c15_19390 Physcomitrium patens HOM05D003870 ORTHO05D004567 3.7e-36 155.2 137 57.7
Pp3c9_19520 Physcomitrium patens HOM05D003870 ORTHO05D004567 1.4e-35 153.3 137 57.7
MD17G1191200 Malus domestica HOM05D003870 ORTHO05D004567 1.9e-35 152.9 85 87.1
Dinv30483 Davidia involucrata HOM05D003870 ORTHO05D004567 1.3e-33 146.7 85 83.5
Mapoly0009s0008 Marchantia polymorpha HOM05D003870 ORTHO05D004567 3.0e-33 145.6 145 55.2
CBR_g31512 Chara braunii HOM05D003870 ORTHO05D004567 1.1e-32 143.7 141 53.9
BolC1t04783H Brassica oleracea HOM05D003870 ORTHO05D004567 4.7e-31 138.3 144 56.9
C01p48190 Brassica napus HOM05D003870 ORTHO05D004567 1.8e-30 136.3 144 56.2
Peaxi162Scf00207g00951 Petunia axillaris HOM05D003870 ORTHO05D004567 2.0e-29 132.9 145 57.9
HanXRQChr10g0313451 Helianthus annuus HOM05D003870 ORTHO05D004567 3.2e-27 125.6 85 72.9
ECA247G2331 Erigeron canadensis HOM05D003870 ORTHO05D004567 1.9e-24 116.3 71 74.6
MD17G1191400 Malus domestica HOM05D003870 ORTHO05D004567 1.2e-21 107.1 59 88.1
MD10G1187500 Malus domestica HOM05D003870 ORTHO05D004567 2.0e-21 106.3 74 71.6
MD14G1193300 Malus domestica HOM05D003870 ORTHO05D004567 9.3e-19 97.4 74 68.9
MCO07G351 Micromonas commoda HOM05D003870 ORTHO05D004567 1.1e-16 90.5 125 40.8
Cre07.g330250 Chlamydomonas reinhardtii HOM05D003870 ORTHO05D004567 1.6e-10 70.1 99 39.4
unitig_747.g21485 Utricularia gibba HOM05D003870 ORTHO05D004567 2.7e-10 69.3 142 40.1
Zm00001eb343540 Zea mays HOM05D003870 ORTHO05D004567 4.6e-10 68.6 130 42.3
MD02G1178900 Malus domestica HOM05D003870 ORTHO05D004567 7.9e-10 67.8 33 90.9


User provided reference genes

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