Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p021244 Quercus lobata HOM05D001353 ORTHO05D029171 3.2e-119 431.8 224 100.0
QL05p021219 Quercus lobata HOM05D001353 ORTHO05D005187 1.1e-53 214.2 124 91.1
CiPaw.01G234100 Carya illinoinensis HOM05D001353 ORTHO05D005187 4.8e-30 135.6 127 62.2
Cfa002108 Carpinus fangiana HOM05D001353 ORTHO05D005187 6.9e-29 131.7 128 61.7
Haze_16338 Corylus avellana HOM05D001353 ORTHO05D005187 1.6e-22 110.5 127 55.9
GSVIVG01017044001 Vitis vinifera HOM05D001353 ORTHO05D005187 9.3e-18 94.7 139 48.9
Ciclev10025383m.g Citrus clementina HOM05D001353 ORTHO05D005187 3.6e-17 92.8 129 47.3
Lalb_Chr24g0396041 Lupinus albus HOM05D001353 ORTHO05D005187 1.0e-16 91.3 128 50.0
TWI12G1071 Tripterygium wilfordii HOM05D001353 ORTHO05D005187 8.7e-16 88.2 101 49.5
Prupe.3G063900 Prunus persica HOM05D001353 ORTHO05D005187 1.5e-15 87.4 127 46.5
Glyma.15G018200 Glycine max HOM05D001353 ORTHO05D005187 1.9e-15 87.0 128 46.1
Medtr2g101350 Medicago truncatula HOM05D001353 ORTHO05D005187 3.3e-15 86.3 127 47.2
MD17G1188900 Malus domestica HOM05D001353 ORTHO05D005187 9.7e-15 84.7 128 44.5
TAR383G0250 Trochodendron aralioides HOM05D001353 ORTHO05D005187 2.8e-14 83.2 153 40.5
Manes.11G036600 Manihot esculenta HOM05D001353 ORTHO05D005187 4.5e-12 75.9 124 46.8
CSS0044224 Camellia sinensis var. sinensis HOM05D001353 ORTHO05D005187 7.7e-12 75.1 140 40.0
TPR.G37234 Trifolium pratense HOM05D001353 ORTHO05D005187 1.7e-11 73.9 128 41.4
VMungo1080G1628 Vigna mungo HOM05D001353 ORTHO05D005187 1.7e-11 73.9 129 45.7
Rhsim12G0201500 Rhododendron simsii HOM05D001353 ORTHO05D000070 1.1e-10 71.2 139 38.1
ClCG09G001840 Citrullus lanatus HOM05D001353 ORTHO05D005187 1.4e-10 70.9 122 39.3
Dinv30464 Davidia involucrata HOM05D001353 ORTHO05D005187 2.5e-10 70.1 128 40.6
Sed0007714 Sechium edule HOM05D001353 ORTHO05D005187 5.5e-10 68.9 92 52.2
CANSAT56G0514 Cannabis sativa HOM05D001353 ORTHO05D005187 2.7e-09 66.6 128 40.6
Lj9A510G79 Lonicera japonica HOM05D001353 ORTHO05D005187 2.7e-09 66.6 131 40.5
Gorai.003G064100 Gossypium raimondii HOM05D001353 ORTHO05D005187 4.6e-09 65.9 127 39.4
MELO3C013426.2 Cucumis melo HOM05D033314 ORTHO05D029171 6.1e-09 65.5 69 52.2
COL.COLO4_30465 Corchorus olitorius HOM05D000453 ORTHO05D000387 2.3e-08 63.5 61 52.5
Lj3g0013233 Lotus japonicus HOM05D001353 ORTHO05D005187 2.3e-08 63.5 126 34.9
CsaV3_7G033510 Cucumis sativus L. HOM05D001353 ORTHO05D005187 3.9e-08 62.8 118 40.7
Phvul.005G170400 Phaseolus vulgaris HOM05D001353 ORTHO05D005187 8.8e-08 61.6 128 37.5
Ca_01153_v3 Cicer arietinum L. HOM05D001353 ORTHO05D005187 1.1e-07 61.2 128 35.9
MBI01_g06185_MAGBIO Magnolia biondii HOM05D001353 ORTHO05D002359 1.5e-07 60.8 130 36.2
Thecc.06G095300 Theobroma cacao HOM05D001353 ORTHO05D005187 1.5e-07 60.8 121 37.2
Duzib160G0428 Durio zibethinus HOM05D001353 ORTHO05D005187 9.7e-07 58.2 113 38.9
FAN02G4091 Fragaria x ananassa HOM05D001353 ORTHO05D005187 9.7e-07 58.2 124 37.9
FAN05G1388 Fragaria x ananassa HOM05D001353 ORTHO05D005187 1.3e-06 57.8 124 37.9
arahy.Tifrunner.gnm1.ann1.8T8ZNV Arachis hypogaea HOM05D001353 ORTHO05D005187 1.7e-06 57.4 130 35.4
Medtr1g036590 Medicago truncatula HOM05D000351 ORTHO05D005187 2.2e-06 57.0 91 46.2
FAN14G4842 Fragaria x ananassa HOM05D001353 ORTHO05D005187 2.8e-06 56.6 118 39.0
Actinidia32713 Actinidia chinensis HOM05D001353 ORTHO05D005187 3.7e-06 56.2 139 31.7


User provided reference genes

Program Settings