Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p020523 Quercus lobata HOM05D008072 ORTHO05D010204 1.6e-52 209.1 104 100.0
MD17G1186400 Malus domestica HOM05D008072 ORTHO05D010204 1.1e-21 106.7 114 54.4
Potri.001G188400 Populus trichocarpa HOM05D008072 ORTHO05D010204 1.4e-21 106.3 110 54.5
Thecc.06G097600 Theobroma cacao HOM05D008072 ORTHO05D010204 1.9e-21 105.9 108 56.5
Dinv37992 Davidia involucrata HOM05D008072 ORTHO05D010204 1.2e-20 103.2 108 57.4
Peaxi162Scf00038g00843 Petunia axillaris HOM05D008072 ORTHO05D010204 1.6e-20 102.8 112 53.6
Prupe.3G061100 Prunus persica HOM05D008072 ORTHO05D010204 2.1e-20 102.4 110 54.5
MD09G1205700 Malus domestica HOM05D008072 ORTHO05D010204 6.1e-20 100.9 106 52.8
Haze_15831 Corylus avellana HOM05D008072 ORTHO05D010204 7.9e-20 100.5 157 44.6
TAR626G1017 Trochodendron aralioides HOM05D008072 ORTHO05D010204 7.9e-20 100.5 105 53.3
FAN09G3706 Fragaria x ananassa HOM05D008072 ORTHO05D010204 1.3e-19 99.8 112 55.4
FAN02G2294 Fragaria x ananassa HOM05D008072 ORTHO05D010204 2.3e-19 99.0 112 53.6
Actinidia09003 Actinidia chinensis HOM05D008072 ORTHO05D010204 3.9e-19 98.2 111 53.2
Rhsim12G0202400 Rhododendron simsii HOM05D008072 ORTHO05D010204 3.9e-19 98.2 108 53.7
FvH4_6g32180 Fragaria vesca HOM05D008072 ORTHO05D010204 5.1e-19 97.8 112 52.7
RcHm_v2.0_Chr2g0140071 Rosa chinensis HOM05D008072 ORTHO05D010204 8.7e-19 97.1 112 50.9
Cpa.g.c31416 Carica papaya HOM05D008072 ORTHO05D010204 1.9e-18 95.9 107 53.3
FAN14G4057 Fragaria x ananassa HOM05D008072 ORTHO05D010204 1.9e-18 95.9 113 51.3
PGSC0003DMG400002533 Solanum tuberosum HOM05D008072 ORTHO05D010204 4.3e-18 94.7 112 52.7
FAN05G4246 Fragaria x ananassa HOM05D008072 ORTHO05D010204 5.7e-18 94.4 112 50.9
Sabra01G0152600 Salix brachista HOM05D008072 ORTHO05D010204 1.3e-17 93.2 111 51.4
PGR102G0255 Punica granatum HOM05D008072 ORTHO05D010204 2.2e-17 92.4 117 49.6
Atru.chr1.3499 Acer truncatum HOM05D008072 ORTHO05D010204 3.7e-17 91.7 120 49.2
Oeu060494.1 Olea europaea HOM05D008072 ORTHO05D010204 3.7e-17 91.7 108 50.9
GSVIVG01017012001 Vitis vinifera HOM05D008072 ORTHO05D010204 3.7e-17 91.7 110 48.2
CSS0040470 Camellia sinensis var. sinensis HOM05D008072 ORTHO05D010204 4.8e-17 91.3 113 49.6
Manes.04G132700 Manihot esculenta HOM05D008072 ORTHO05D010204 6.3e-17 90.9 112 54.5
Sopen03g039710 Solanum pennellii HOM05D008072 ORTHO05D010204 1.4e-16 89.7 109 52.3
TWI18G1284 Tripterygium wilfordii HOM05D008072 ORTHO05D010204 4.1e-16 88.2 114 47.4
Cc04_g02690 Coffea canephora HOM05D008072 ORTHO05D010204 6.9e-16 87.4 110 48.2
Sc10g0007210 Simmondsia chinensis HOM05D008072 ORTHO05D010204 6.9e-16 87.4 111 47.7
Hma1.2p1_3269F.1_g334750 Hydrangea macrophylla HOM05D008072 ORTHO05D010204 9.0e-16 87.0 107 49.5
Gorai.003G063000 Gossypium raimondii HOM05D008072 ORTHO05D010204 1.2e-15 86.7 107 52.3
Gohir.D03G059100 Gossypium hirsutum HOM05D008072 ORTHO05D010204 2.6e-15 85.5 107 52.3
Solyc03g120880.4 Solanum lycopersicum HOM05D004877 ORTHO05D005942 2.6e-15 85.5 106 50.9
Ciclev10026797m.g Citrus clementina HOM05D008072 ORTHO05D010204 3.4e-15 85.1 111 46.8
TPR.G35014 Trifolium pratense HOM05D008072 ORTHO05D010204 7.7e-15 84.0 109 45.9
Gohir.A02G118500 Gossypium hirsutum HOM05D008072 ORTHO05D010204 1.0e-14 83.6 107 51.4
Duzib192G0771 Durio zibethinus HOM05D008072 ORTHO05D010204 1.3e-14 83.2 119 45.4
Aqoxy7G01464 Aquilegia oxysepala HOM05D008072 ORTHO05D010204 1.7e-14 82.8 110 46.4
HanXRQChr16g0501221 Helianthus annuus HOM05D008072 ORTHO05D010204 2.9e-14 82.0 105 44.8
ClCG09G000070 Citrullus lanatus HOM05D008072 ORTHO05D010204 3.8e-14 81.6 109 47.7
SalBow7G3462 Salvia bowleyana HOM05D008072 ORTHO05D010204 5.0e-14 81.3 114 44.7
CANSAT56G4142 Cannabis sativa HOM05D008072 ORTHO05D010204 1.9e-13 79.3 112 50.0
Nn2g11609 Nelumbo nucifera HOM05D008072 ORTHO05D010204 3.2e-13 78.6 105 42.9
Lj3g0001751 Lotus japonicus HOM05D008072 ORTHO05D010204 7.2e-13 77.4 109 45.9
Sed0011388 Sechium edule HOM05D008072 ORTHO05D010204 1.2e-12 76.6 105 44.8
MSTRG.9481 Avicennia marina HOM05D008072 ORTHO05D010204 2.7e-12 75.5 113 42.5
Lalb_Chr04g0262911 Lupinus albus HOM05D008072 ORTHO05D010204 3.6e-12 75.1 106 45.3
VMungo0331G2041 Vigna mungo HOM05D008072 ORTHO05D010204 4.6e-12 74.7 109 44.0
CiPaw.02G146800 Carya illinoinensis HOM05D008072 ORTHO05D010204 1.0e-11 73.6 111 50.5
Phvul.010G146400 Phaseolus vulgaris HOM05D008072 ORTHO05D010204 1.0e-11 73.6 111 41.4
Glyma.08G202200 Glycine max HOM05D008072 ORTHO05D010204 1.8e-11 72.8 106 43.4
Cfa003662 Carpinus fangiana HOM05D008072 ORTHO05D010204 5.1e-11 71.2 90 52.2
Medtr8g013930 Medicago truncatula HOM05D008072 ORTHO05D010204 8.8e-11 70.5 108 41.7
Glyma.07G016900 Glycine max HOM05D008072 ORTHO05D010204 1.5e-10 69.7 108 44.4
Psat4g197480 Pisum sativum HOM05D008072 ORTHO05D010204 2.0e-10 69.3 108 42.6
Nn8g39117 Nelumbo nucifera HOM05D008072 ORTHO05D010204 3.3e-10 68.6 106 40.6
Nitab4.5_0001755g0100 Nicotiana tabacum HOM05D008072 ORTHO05D010204 9.7e-10 67.0 72 55.6
EL10Ac9g22100 Beta vulgaris HOM05D008072 ORTHO05D010204 1.3e-09 66.6 109 38.5
MBI01_g42894_MAGBIO Magnolia biondii HOM05D008072 ORTHO05D010204 1.3e-09 66.6 110 45.5
CsaV3_7G035400 Cucumis sativus L. HOM05D008072 ORTHO05D010204 2.8e-09 65.5 106 43.4
ECA232G1650 Erigeron canadensis HOM05D004877 ORTHO05D005942 4.8e-09 64.7 96 45.8
Hund06655 Selenicereus undatus HOM05D008072 ORTHO05D010204 1.4e-08 63.2 101 40.6
Hund31378 Selenicereus undatus HOM05D008072 ORTHO05D010204 2.4e-08 62.4 101 40.6
arahy.Tifrunner.gnm1.ann1.XD1M86 Arachis hypogaea HOM05D008072 ORTHO05D010204 3.1e-08 62.0 105 42.9
MELO3C024449.2 Cucumis melo HOM05D008072 ORTHO05D010204 3.1e-08 62.0 109 44.0
arahy.Tifrunner.gnm1.ann1.UX9EW1 Arachis hypogaea HOM05D008072 ORTHO05D010204 4.1e-08 61.6 104 41.3
SGA_v2.0_scaffold4G02017 Striga asiatica HOM05D008072 ORTHO05D010204 4.1e-08 61.6 118 37.3
AUR62031887 Chenopodium quinoa HOM05D008072 ORTHO05D010204 3.4e-07 58.5 105 37.1
Lsat_1_v5_gn_4_99940 Lactuca sativa HOM05D008072 ORTHO05D010204 1.7e-06 56.2 98 37.8
SEGI_35585 Sequoiadendron giganteum HOM05D008072 ORTHO05D010204 8.5e-06 53.9 58 48.3


User provided reference genes

Program Settings