Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p019674 Quercus lobata HOM05D008208 ORTHO05D010143 0.0e+00 1379.8 748 100.0
CiPaw.02G145300 Carya illinoinensis HOM05D008208 ORTHO05D010143 1.0e-153 548.1 761 48.4
GSVIVG01016967001 Vitis vinifera HOM05D000585 ORTHO05D001841 3.6e-90 337.0 790 39.4
Prupe.3G057400 Prunus persica HOM05D008208 ORTHO05D010143 3.5e-85 320.5 869 35.6
TAR639G0001 Trochodendron aralioides HOM05D008208 ORTHO05D010143 7.3e-83 312.8 817 35.5
MD09G1201800 Malus domestica HOM05D008208 ORTHO05D010143 4.0e-81 307.0 857 37.0
MD17G1181700 Malus domestica HOM05D008208 ORTHO05D010143 1.5e-80 305.1 801 38.1
Ciclev10025127m.g Citrus clementina HOM05D008208 ORTHO05D010143 2.6e-80 304.3 781 37.5
TAR626G1368 Trochodendron aralioides HOM05D008208 ORTHO05D010143 9.9e-80 302.4 808 34.9
Manes.11G032600 Manihot esculenta HOM05D008208 ORTHO05D010143 1.4e-78 298.5 759 37.0
Actinidia09010 Actinidia chinensis HOM05D008208 ORTHO05D010143 2.7e-77 294.3 760 36.2
Actinidia39131 Actinidia chinensis HOM05D008208 ORTHO05D010143 2.6e-72 277.7 801 36.1
MD09G1201700 Malus domestica HOM05D008208 ORTHO05D010143 2.7e-69 267.7 935 32.8
TAR624G0194 Trochodendron aralioides HOM05D008208 ORTHO05D010143 9.0e-65 252.7 744 32.7
Duzib192G1063 Durio zibethinus HOM05D008208 ORTHO05D010143 9.3e-62 242.7 839 33.1
CSS0036998 Camellia sinensis var. sinensis HOM05D008208 ORTHO05D010143 8.7e-60 236.1 772 33.3
CSS0033280 Camellia sinensis var. sinensis HOM05D008208 ORTHO05D010143 1.3e-58 232.3 778 33.0
vmacro17009 Vaccinium macrocarpon HOM05D008208 ORTHO05D010143 4.9e-55 220.3 765 32.4
RcHm_v2.0_Chr2g0140811 Rosa chinensis HOM05D008208 ORTHO05D010143 2.4e-54 218.0 592 34.0
Thecc.06G101100 Theobroma cacao HOM05D008208 ORTHO05D010143 1.5e-51 208.8 843 31.0
TWI18G0382 Tripterygium wilfordii HOM05D008208 ORTHO05D010143 3.3e-51 207.6 888 29.5
Oeu002526.1 Olea europaea HOM05D008208 ORTHO05D010143 8.1e-50 203.0 777 32.0
Gohir.A10G065000 Gossypium hirsutum HOM05D008208 ORTHO05D010143 3.1e-49 201.1 800 33.2
Lj9A514T51 Lonicera japonica HOM05D008208 ORTHO05D010143 3.1e-49 201.1 752 32.3
CANSAT56G0900 Cannabis sativa HOM05D008208 ORTHO05D010143 1.5e-48 198.7 787 32.9
Gohir.D10G066500 Gossypium hirsutum HOM05D008208 ORTHO05D010143 4.9e-47 193.7 797 33.2
Nn6g35343 Nelumbo nucifera HOM05D008208 ORTHO05D010143 2.4e-46 191.4 874 28.1
Dinv30429 Davidia involucrata HOM05D008208 ORTHO05D010143 4.6e-45 187.2 304 45.7
Gorai.011G070600 Gossypium raimondii HOM05D008208 ORTHO05D010143 4.6e-45 187.2 783 32.7
ClCG07G013360 Citrullus lanatus HOM05D026900 ORTHO05D010143 4.3e-43 180.6 756 30.3
Nn8g39048 Nelumbo nucifera HOM05D008208 ORTHO05D010143 4.3e-43 180.6 774 29.1
Lj5A52T19 Lonicera japonica HOM05D008208 ORTHO05D010143 3.1e-41 174.5 745 31.8
Sabra01G0150900 Salix brachista HOM05D008208 ORTHO05D010143 6.5e-39 166.8 715 31.0
Sopen03g039910 Solanum pennellii HOM05D008208 ORTHO05D010143 7.1e-38 163.3 760 29.7
PGSC0003DMG400002607 Solanum tuberosum HOM05D008208 ORTHO05D010143 1.2e-37 162.5 718 29.8
COL.COLO4_30526 Corchorus olitorius HOM05D008208 ORTHO05D010143 2.1e-37 161.8 746 30.8
Nitab4.5_0006022g0030 Nicotiana tabacum HOM05D008208 ORTHO05D010143 3.5e-37 161.0 767 30.1
Eucgr.F03082 Eucalyptus grandis HOM05D008208 ORTHO05D010143 1.1e-35 156.0 743 30.4
Solyc03g121080.3 Solanum lycopersicum HOM05D008208 ORTHO05D010143 3.3e-35 154.5 755 30.3
Cc04_g02470 Coffea canephora HOM05D008208 ORTHO05D010143 4.3e-35 154.1 878 28.9
Nitab4.5_0004969g0030 Nicotiana tabacum HOM05D008208 ORTHO05D010143 5.7e-35 153.7 790 29.4
Potri.001G190601 Populus trichocarpa HOM05D008208 ORTHO05D010143 9.7e-35 152.9 681 29.8
Peaxi162Scf00038g01129 Petunia axillaris HOM05D008208 ORTHO05D010143 1.3e-34 152.5 784 31.5
RcHm_v2.0_Chr2g0140801 Rosa chinensis HOM05D008208 ORTHO05D010143 3.7e-34 151.0 196 51.5
Sed0025504 Sechium edule HOM05D026900 ORTHO05D010143 1.1e-33 149.4 815 27.6
MBI01_g10116_MAGBIO Magnolia biondii HOM05D008208 ORTHO05D010143 1.4e-33 149.1 768 29.7
MELO3C013005.2 Cucumis melo HOM05D026900 ORTHO05D010143 2.9e-31 141.4 649 30.8
PSO210G2837 Papaver somniferum HOM05D029104 ORTHO05D010143 3.2e-30 137.9 792 30.7
Oeu024259.1 Olea europaea HOM05D008208 ORTHO05D010143 7.2e-30 136.7 729 28.8
MSTRG.11020 Avicennia marina HOM05D008208 ORTHO05D010143 1.0e-28 132.9 759 29.4
Dinv30428 Davidia involucrata HOM05D008208 ORTHO05D010143 1.4e-28 132.5 414 34.5
MBI04_g07011_MAGBIO Magnolia biondii HOM05D008208 ORTHO05D010143 2.5e-27 128.3 771 29.4
CsaV3_3G023500 Cucumis sativus L. HOM05D026900 ORTHO05D010143 5.3e-25 120.6 781 27.3
Hund07613 Selenicereus undatus HOM05D008208 ORTHO05D010143 5.3e-25 120.6 772 26.8
PSO210G1301 Papaver somniferum HOM05D029104 ORTHO05D010143 4.2e-22 110.9 824 29.4
Sc10g0007610 Simmondsia chinensis HOM05D008208 ORTHO05D010143 1.1e-19 102.8 328 35.7
EL10Ac9g21199 Beta vulgaris HOM05D008208 ORTHO05D010143 8.2e-18 96.7 305 34.1
DCAR_016182 Daucus carota HOM05D002915 ORTHO05D003004 1.8e-17 95.5 774 27.5
PGR102G1678 Punica granatum HOM05D008208 ORTHO05D010143 7.7e-16 90.1 757 26.0
HanXRQChr09g0275691 Helianthus annuus HOM05D008208 ORTHO05D010143 1.1e-14 86.3 240 35.8
DCAR_023083 Daucus carota HOM05D008208 ORTHO05D010143 9.4e-14 83.2 675 29.0
SGA_v2.0_scaffold265G46060 Striga asiatica HOM05D008208 ORTHO05D010143 8.8e-12 76.6 812 25.6
ECA232G2142 Erigeron canadensis HOM05D008208 ORTHO05D010143 4.4e-11 74.3 756 24.7
Atru.chr1.3545 Acer truncatum HOM05D008208 ORTHO05D010143 9.7e-11 73.2 203 38.9
Migut.I00959 Erythranthe guttata HOM05D008208 ORTHO05D010143 1.3e-10 72.8 376 29.3
SalBow2G3317 Salvia bowleyana HOM05D008208 ORTHO05D010143 1.7e-10 72.4 804 25.6
Prupe.8G151700 Prunus persica HOM05D004628 ORTHO05D005166 5.3e-09 67.4 241 32.4
ATR0705G064 Amborella trichopoda HOM05D008208 ORTHO05D010143 2.0e-08 65.5 781 24.6
Migut.B00478 Erythranthe guttata HOM05D004628 ORTHO05D005166 2.0e-08 65.5 201 33.3
MBI16_g18399_MAGBIO Magnolia biondii HOM05D004628 ORTHO05D005166 5.9e-08 63.9 203 33.5
CDE02G2770 Ceratophyllum demersum HOM05D046919 ORTHO05D043903 7.7e-08 63.5 169 36.1
SalBow6G1764 Salvia bowleyana HOM05D004628 ORTHO05D005166 1.3e-07 62.8 174 34.5
SalBow6G5308 Salvia bowleyana HOM05D004628 ORTHO05D005166 1.3e-07 62.8 174 34.5
Lsat_1_v5_gn_5_134320 Lactuca sativa HOM05D008208 ORTHO05D010143 1.7e-07 62.4 420 25.0
Dinv09529 Davidia involucrata HOM05D004628 ORTHO05D005166 3.8e-07 61.2 226 32.7
Aqoxy1G02129 Aquilegia oxysepala HOM05D057169 ORTHO05D010143 6.5e-07 60.5 791 25.2
Prupe.8G151500 Prunus persica HOM05D004628 ORTHO05D005166 6.5e-07 60.5 201 34.3
Gohir.D13G046500 Gossypium hirsutum HOM05D004628 ORTHO05D005166 8.5e-07 60.1 208 33.2
Oeu037295.1 Olea europaea HOM05D004628 ORTHO05D005166 8.5e-07 60.1 195 33.8
Aqoxy1G02121 Aquilegia oxysepala HOM05D057169 ORTHO05D010143 1.9e-06 58.9 546 25.8
Hma1.2p1_1051F.1_g252220 Hydrangea macrophylla HOM05D004628 ORTHO05D005166 2.5e-06 58.5 790 24.9
Zm00001eb217550 Zea mays HOM05D058439 ORTHO05D005166 2.5e-06 58.5 203 29.6
CDE05G0720 Ceratophyllum demersum HOM05D008208 ORTHO05D010143 4.2e-06 57.8 126 37.3
Gorai.013G052200 Gossypium raimondii HOM05D004628 ORTHO05D005166 4.2e-06 57.8 208 32.7
Hund00415 Selenicereus undatus HOM05D004628 ORTHO05D005166 5.5e-06 57.4 260 29.2
Lsat_1_v5_gn_5_111860 Lactuca sativa HOM05D004628 ORTHO05D005166 7.2e-06 57.0 178 33.7
BolC7t41157H Brassica oleracea HOM05D004628 ORTHO05D005166 9.4e-06 56.6 288 26.7


User provided reference genes

Program Settings