Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p017993 Quercus lobata HOM05D003057 ORTHO05D003904 1.8e-153 545.8 269 100.0
COL.COLO4_07828 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.1e-89 334.0 269 62.5
Rhsim02G0047600 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.1e-89 334.0 270 60.7
Rhsim10G0170800 Rhododendron simsii HOM05D003057 ORTHO05D003904 6.0e-88 328.2 270 60.4
RhsimUnG0227600 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.3e-87 327.0 270 60.0
QL01p049124 Quercus lobata HOM05D003057 ORTHO05D003904 5.1e-87 325.1 208 80.3
Rhsim03G0157600 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.5e-86 323.6 270 61.5
RhsimUnG0046200 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.9e-86 323.2 270 59.6
Rhsim11G0159700 Rhododendron simsii HOM05D003057 ORTHO05D003904 7.4e-86 321.2 270 60.0
Rhsim05G0119600 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.1e-85 319.7 270 59.6
Rhsim08G0118100 Rhododendron simsii HOM05D003057 ORTHO05D003904 4.8e-85 318.5 270 59.6
RhsimUnG0099900 Rhododendron simsii HOM05D003057 ORTHO05D003904 4.8e-85 318.5 270 59.6
COL.COLO4_20007 Corchorus olitorius HOM05D003057 ORTHO05D003904 9.0e-84 314.3 269 58.4
COL.COLO4_08929 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.2e-83 313.9 269 58.4
Hma1.2p1_0622F.1_g190920 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 3.8e-82 308.9 269 58.4
TWI15G0994 Tripterygium wilfordii HOM05D003057 ORTHO05D003904 1.4e-81 307.0 265 57.7
PSO339G0276 Papaver somniferum HOM05D003057 ORTHO05D003904 3.2e-81 305.8 250 61.2
ECA248G1006 Erigeron canadensis HOM05D003057 ORTHO05D003904 4.2e-81 305.4 269 58.7
Rhsim11G0002500 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.1e-80 303.1 249 60.6
PSO170G5731 Papaver somniferum HOM05D003057 ORTHO05D003904 3.5e-80 302.4 251 60.6
Rhsim01G0115600 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.3e-79 299.7 247 64.0
PSO017G6481 Papaver somniferum HOM05D003057 ORTHO05D003904 1.3e-77 293.9 269 54.3
PSO170G5304 Papaver somniferum HOM05D003057 ORTHO05D003904 1.3e-77 293.9 269 54.6
PSO339G3716 Papaver somniferum HOM05D003057 ORTHO05D003904 1.3e-77 293.9 269 52.8
Lj4g0012344 Lotus japonicus HOM05D003057 ORTHO05D003904 6.3e-77 291.6 270 54.4
PSO210G2781 Papaver somniferum HOM05D003057 ORTHO05D003904 1.4e-76 290.4 269 53.2
Lj5g0003986 Lotus japonicus HOM05D003057 ORTHO05D003904 5.3e-76 288.5 270 54.4
Rhsim09G0063100 Rhododendron simsii HOM05D003057 ORTHO05D003904 5.3e-76 288.5 250 59.6
ECA234G4294 Erigeron canadensis HOM05D003057 ORTHO05D003904 1.2e-75 287.3 242 61.2
Lj2g0002985 Lotus japonicus HOM05D003057 ORTHO05D003904 2.6e-75 286.2 270 53.7
PSO832G2073 Papaver somniferum HOM05D003057 ORTHO05D003904 2.6e-75 286.2 269 53.5
PSO724G1375 Papaver somniferum HOM05D003057 ORTHO05D003904 5.9e-75 285.0 255 55.7
PSO017G5767 Papaver somniferum HOM05D003057 ORTHO05D003904 7.6e-75 284.6 267 53.9
PSO478G2060 Papaver somniferum HOM05D003057 ORTHO05D003904 2.1e-72 276.6 258 54.3
RhsimUnG0134200 Rhododendron simsii HOM05D003057 ORTHO05D003904 7.9e-72 274.6 221 62.4
Rhsim02G0188400 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.0e-71 274.2 243 58.0
PSO675G7321 Papaver somniferum HOM05D003057 ORTHO05D003904 3.0e-71 272.7 219 63.0
AL6G26450 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 9.7e-70 267.7 265 49.4
Rhsim02G0188200 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.8e-69 266.2 230 59.1
TPR.G1746 Trifolium pratense HOM05D003057 ORTHO05D003904 2.4e-68 263.1 270 50.7
Rhsim12G0027300 Rhododendron simsii HOM05D003057 ORTHO05D003904 9.1e-68 261.2 217 59.4
PSO017G3866 Papaver somniferum HOM05D003057 ORTHO05D003904 7.7e-67 258.1 234 56.0
PSO384G2563 Papaver somniferum HOM05D003057 ORTHO05D003904 7.2e-65 251.5 265 49.4
SGA_v2.0_scaffold73G24256 Striga asiatica HOM05D003057 ORTHO05D003904 7.2e-65 251.5 264 46.2
BcaC01g02975 Brassica carinata HOM05D003057 ORTHO05D003904 1.6e-64 250.4 268 47.4
PSO761G0317 Papaver somniferum HOM05D003057 ORTHO05D003904 3.9e-63 245.7 262 48.9
ECA234G0491 Erigeron canadensis HOM05D003057 ORTHO05D003904 1.5e-62 243.8 224 56.7
PSO063G5105 Papaver somniferum HOM05D003057 ORTHO05D003904 3.3e-62 242.7 237 54.9
COL.COLO4_24961 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.4e-62 242.3 267 46.8
PSO151G0074 Papaver somniferum HOM05D003057 ORTHO05D003904 4.4e-62 242.3 269 47.2
PSO761G0015 Papaver somniferum HOM05D003057 ORTHO05D003904 4.4e-62 242.3 265 47.5
PSO017G2586 Papaver somniferum HOM05D003057 ORTHO05D003904 2.2e-61 240.0 269 46.1
Ah.06g181680 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.8e-61 239.6 269 47.6
Ah.07g202550 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.7e-61 239.2 266 47.0
PSO063G0536 Papaver somniferum HOM05D003057 ORTHO05D003904 8.2e-61 238.0 265 46.8
Ah.03g140530 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.1e-60 237.7 270 46.7
Ah.03g142690 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.1e-60 237.7 266 47.0
Ah.06g184390 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.1e-60 237.7 266 47.0
COL.COLO4_21501 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.1e-60 237.7 235 53.2
Ah.07g196960 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.4e-60 237.3 266 46.6
Ah.13g069490 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.4e-60 237.3 266 46.6
Ah.01g013430 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.8e-60 236.9 266 47.0
Ah.04g162690 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.8e-60 236.9 269 47.2
PSO357G0662 Papaver somniferum HOM05D003057 ORTHO05D003904 3.1e-60 236.1 265 46.4
Ah.04g158790 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.3e-60 235.3 266 46.6
TWI31G1500 Tripterygium wilfordii HOM05D003057 ORTHO05D003904 5.3e-60 235.3 266 47.4
Ah.03g145610 Amaranthus hybridus HOM05D003057 ORTHO05D003904 6.9e-60 235.0 264 47.0
Ah.04g155590 Amaranthus hybridus HOM05D003057 ORTHO05D003904 6.9e-60 235.0 264 47.0
PSO357G0652 Papaver somniferum HOM05D003057 ORTHO05D003904 6.9e-60 235.0 269 45.7
Ah.15g097480 Amaranthus hybridus HOM05D003057 ORTHO05D003904 9.1e-60 234.6 270 45.6
AL5G22340 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 9.1e-60 234.6 257 45.9
Ah.14g084280 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.2e-59 234.2 270 45.9
COL.COLO4_06022 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.0e-59 233.4 267 44.9
Ah.13g068770 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.6e-59 233.0 264 46.6
Ah.01g017940 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.4e-59 232.6 264 46.6
CAN.G960.86 Capsicum annuum HOM05D003057 ORTHO05D003904 4.5e-59 232.3 217 56.7
Ah.06g187260 Amaranthus hybridus HOM05D003057 ORTHO05D003904 7.7e-59 231.5 264 45.8
Ah.10g026650 Amaranthus hybridus HOM05D003057 ORTHO05D003904 7.7e-59 231.5 264 45.8
PSO170G1938 Papaver somniferum HOM05D003057 ORTHO05D003904 1.7e-58 230.3 265 44.5
BcaC08g45994 Brassica carinata HOM05D003057 ORTHO05D003904 2.9e-58 229.6 270 44.4
Ah.07g201230 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.8e-58 229.2 270 45.2
Ah.07g202070 Amaranthus hybridus HOM05D003057 ORTHO05D003904 8.5e-58 228.0 261 42.9
COL.COLO4_09308 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.9e-57 226.9 221 48.9
PSO339G6256 Papaver somniferum HOM05D003057 ORTHO05D003904 3.2e-57 226.1 269 43.9
Ah.01g023980 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.2e-57 225.7 269 45.4
Ah.11g045640 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.7e-56 223.0 269 41.3
Ah.04g164590 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.6e-56 222.6 269 41.3
PSO170G6610 Papaver somniferum HOM05D003057 ORTHO05D003904 1.0e-55 221.1 202 55.0
Ah.03g144340 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.8e-55 220.3 269 40.5
Ah.16g106200 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.8e-55 220.3 269 43.1
Ah.13g067120 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.3e-55 219.9 269 40.5
PSO170G6344 Papaver somniferum HOM05D003057 ORTHO05D003904 5.2e-55 218.8 265 43.0
PSO384G4427 Papaver somniferum HOM05D003057 ORTHO05D003904 5.2e-55 218.8 265 43.0
Ah.10g032920 Amaranthus hybridus HOM05D003057 ORTHO05D003904 6.7e-55 218.4 269 39.8
Rhsim07G0167300 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.1e-54 217.6 185 59.5
Ah.06g182610 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.0e-54 216.9 269 40.1
Ah.11g041830 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.4e-54 215.7 269 39.8
Ah.06g181920 Amaranthus hybridus HOM05D003057 ORTHO05D003904 7.4e-54 214.9 269 40.1
Ah.16g103350 Amaranthus hybridus HOM05D003057 ORTHO05D003904 9.7e-54 214.5 269 40.1
Ah.11g046560 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.7e-53 213.8 269 39.4
TPR.G14797 Trifolium pratense HOM05D003057 ORTHO05D003904 3.7e-53 212.6 230 49.6
PSO384G0803 Papaver somniferum HOM05D003057 ORTHO05D003904 8.2e-53 211.5 244 46.7
Hma1.2p1_0035F.1_g021680 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 4.1e-52 209.1 175 61.7
Ah.03g143550 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.3e-52 208.8 269 39.4
PSO339G2793 Papaver somniferum HOM05D003057 ORTHO05D003904 7.0e-52 208.4 233 46.4
COL.COLO4_37789 Corchorus olitorius HOM05D003057 ORTHO05D003904 9.1e-52 208.0 267 43.1
Ah.07g201280 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.2e-51 207.6 269 39.0
Ah.01g002160 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.6e-51 207.2 270 40.4
Ah.05g175220 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.6e-51 207.2 269 38.3
Rhsim09G0038900 Rhododendron simsii HOM05D009719 ORTHO05D003904 1.6e-51 207.2 176 60.8
Ah.06g181160 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.0e-51 206.8 269 39.0
COL.COLO4_37503 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.0e-51 206.8 267 41.9
PSO170G6652 Papaver somniferum HOM05D003057 ORTHO05D003904 3.5e-51 206.1 162 64.8
PSO198G0152 Papaver somniferum HOM05D003057 ORTHO05D003904 4.5e-51 205.7 216 50.5
Ah.15g097160 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.8e-50 202.6 235 45.5
PSO210G0544 Papaver somniferum HOM05D003057 ORTHO05D003904 3.8e-50 202.6 222 47.3
Ah.07g206230 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.0e-50 202.2 270 39.3
Ah.10g032220 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.9e-49 200.3 269 39.0
Rhsim06G0137900 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.2e-49 199.5 234 47.9
TPR.G34813 Trifolium pratense HOM05D003057 ORTHO05D003904 3.2e-49 199.5 270 41.5
PSO832G1677 Papaver somniferum HOM05D003057 ORTHO05D003904 2.6e-46 189.9 221 45.7
Rhsim01G0178000 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.3e-46 189.5 269 40.9
PSO339G0160 Papaver somniferum HOM05D003057 ORTHO05D003904 9.7e-46 188.0 265 38.5
PSO478G2424 Papaver somniferum HOM05D003057 ORTHO05D003904 1.3e-45 187.6 222 45.5
COL.COLO4_10110 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.7e-45 187.2 228 46.9
PSO210G2682 Papaver somniferum HOM05D003057 ORTHO05D003904 1.7e-45 187.2 216 45.8
PSO675G0308 Papaver somniferum HOM05D003057 ORTHO05D003904 1.7e-45 187.2 216 45.8
COL.COLO4_20032 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.6e-43 180.6 235 45.1
PSO017G4412 Papaver somniferum HOM05D003057 ORTHO05D003904 1.6e-43 180.6 198 48.5
PSO017G4793 Papaver somniferum HOM05D003057 ORTHO05D003904 7.7e-43 178.3 197 48.2
Rhsim11G0020100 Rhododendron simsii HOM05D003057 ORTHO05D003904 7.7e-43 178.3 140 67.1
BcaC04g21929 Brassica carinata HOM05D003057 ORTHO05D003904 9.4e-41 171.4 262 37.4
COL.COLO4_27567 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.6e-40 170.6 146 61.0
TPR.G38366 Trifolium pratense HOM05D003057 ORTHO05D003904 2.1e-40 170.2 263 38.4
PSO170G4809 Papaver somniferum HOM05D003057 ORTHO05D003904 5.7e-38 162.2 177 45.8
PSO063G5055 Papaver somniferum HOM05D003057 ORTHO05D003904 2.2e-37 160.2 177 45.2
PSO017G7296 Papaver somniferum HOM05D003057 ORTHO05D003904 4.2e-33 146.0 157 48.4
Hma1.2p1_1282F.1_g272710 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 7.2e-33 145.2 216 41.2
COL.COLO4_22596 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.1e-32 143.7 217 41.0
Ah.01g013550 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.3e-31 140.2 160 44.4
PGSC0003DMG400002198 Solanum tuberosum HOM05D003057 ORTHO05D003904 2.0e-30 137.1 131 57.3
TPR.G13641 Trifolium pratense HOM05D003057 ORTHO05D003904 1.3e-29 134.4 148 48.0
COL.COLO4_31045 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.7e-29 134.0 161 49.1
COL.COLO4_28150 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.9e-29 132.5 139 49.6
COL.COLO4_30277 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.8e-28 130.6 201 38.8
PSO013G0378 Papaver somniferum HOM05D003057 ORTHO05D003904 5.4e-28 129.0 144 51.4
COL.COLO4_35241 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.2e-27 127.9 219 39.7
Rhsim05G0202400 Rhododendron simsii HOM05D001226 ORTHO05D001078 4.5e-27 125.9 104 59.6
COL.COLO4_37543 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.3e-26 124.4 124 51.6
SGA_v2.0_scaffold17G08157 Striga asiatica HOM05D003057 ORTHO05D003904 2.3e-26 123.6 147 42.9
Ah.16g108140 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.0e-26 122.5 162 40.1
PSO832G3916 Papaver somniferum HOM05D003057 ORTHO05D003904 1.2e-24 117.9 128 47.7
TPR.G14789 Trifolium pratense HOM05D003057 ORTHO05D003904 2.8e-24 116.7 256 31.6
Duzib205G1595 Durio zibethinus HOM05D003057 ORTHO05D003904 1.4e-23 114.4 120 53.3
PSO675G8645 Papaver somniferum HOM05D003057 ORTHO05D003904 3.0e-23 113.2 120 52.5
PSO832G1972 Papaver somniferum HOM05D000294 ORTHO05D000177 6.8e-23 112.1 113 45.1
PSO832G3441 Papaver somniferum HOM05D000294 ORTHO05D000177 6.8e-23 112.1 113 45.1
PSO339G1811 Papaver somniferum HOM05D000294 ORTHO05D000177 1.2e-22 111.3 193 34.2
COL.COLO4_04362 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.0e-22 110.5 205 37.1
PSO210G4431 Papaver somniferum HOM05D003057 ORTHO05D003904 2.2e-21 107.1 92 55.4
TPR.G28675 Trifolium pratense HOM05D003057 ORTHO05D003904 7.0e-20 102.1 126 48.4
COL.COLO4_37925 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.2e-19 101.3 102 49.0
AUR62026174 Chenopodium quinoa HOM05D003057 ORTHO05D003904 2.7e-19 100.1 216 32.9
COL.COLO4_04492 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.7e-19 100.1 135 43.0
COL.COLO4_35222 Corchorus olitorius HOM05D003057 ORTHO05D003904 5.0e-18 95.9 197 34.0
SHI08288 Sapria himalayana HOM05D003057 ORTHO05D003904 5.6e-17 92.4 119 43.7
TPR.G9018 Trifolium pratense HOM05D003057 ORTHO05D003904 2.8e-16 90.1 109 42.2
PSO339G3646 Papaver somniferum HOM05D003057 ORTHO05D003904 3.6e-16 89.7 86 53.5
SGA_v2.0_scaffold16G07775 Striga asiatica HOM05D003057 ORTHO05D003904 6.2e-16 89.0 138 39.1
TPR.G33575 Trifolium pratense HOM05D003057 ORTHO05D003904 1.7e-13 80.9 68 52.9
Rhsim08G0114700 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.9e-12 77.4 76 48.7
Rhsim08G0101000 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.5e-11 73.2 52 61.5
TPR.G9017 Trifolium pratense HOM05D003057 ORTHO05D003904 1.0e-10 71.6 63 52.4
Os06g0523701 Oryza sativa ssp. japonica HOM05D003057 ORTHO05D003904 1.1e-09 68.2 68 48.5
TPR.G29392 Trifolium pratense HOM05D003057 ORTHO05D003904 2.5e-09 67.0 87 47.1
PSO384G2001 Papaver somniferum HOM05D003057 ORTHO05D003904 4.3e-09 66.2 68 47.1
PSO832G4354 Papaver somniferum HOM05D003057 ORTHO05D003904 2.8e-08 63.5 57 49.1
ECA236G3949 Erigeron canadensis HOM05D003057 ORTHO05D003904 8.1e-08 62.0 48 58.3
COL.COLO4_37623 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.4e-07 61.2 53 49.1
Medtr7g060420 Medicago truncatula HOM05D000645 ORTHO05D000494 1.2e-06 58.2 102 37.3
CAN.G523.32 Capsicum annuum HOM05D002887 ORTHO05D003159 3.4e-06 56.6 44 54.5


User provided reference genes

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