Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p017661 Quercus lobata HOM05D000003 ORTHO05D000167 1.9e-50 202.2 103 100.0
QL03p066006 Quercus lobata HOM05D001020 ORTHO05D014173 6.2e-33 144.1 103 66.0
QL04p064882 Quercus lobata HOM05D000003 ORTHO05D000167 1.4e-32 142.9 103 65.0
QL93p0215_0031 Quercus lobata HOM05D000003 ORTHO05D000167 1.8e-32 142.5 103 65.0
QL04p069059 Quercus lobata HOM05D000003 ORTHO05D000167 1.2e-31 139.8 103 64.1
QL05p038991 Quercus lobata HOM05D000003 ORTHO05D000167 1.1e-29 133.3 103 60.2
QL09p001270 Quercus lobata HOM05D000003 ORTHO05D000167 2.4e-29 132.1 103 62.1
QL08p037725 Quercus lobata HOM05D000003 ORTHO05D000167 3.9e-27 124.8 96 60.4
QL02p037441 Quercus lobata HOM05D000003 ORTHO05D000167 5.6e-26 120.9 96 60.4
QL02p037922 Quercus lobata HOM05D000003 ORTHO05D000167 4.7e-25 117.9 96 57.3
QL07p038035 Quercus lobata HOM05D000003 ORTHO05D000167 5.2e-24 114.4 95 56.8
QL10p017193 Quercus lobata HOM05D000003 ORTHO05D000167 2.6e-23 112.1 102 56.9
QL05p068740 Quercus lobata HOM05D000003 ORTHO05D000004 1.3e-22 109.8 87 60.9
QL05p069113 Quercus lobata HOM05D000003 ORTHO05D000004 1.3e-22 109.8 87 60.9
QL10p030412 Quercus lobata HOM05D000003 ORTHO05D000167 2.1e-12 75.9 97 41.2
QL05p012625 Quercus lobata HOM05D000003 ORTHO05D000167 3.5e-12 75.1 97 40.2
CSS0000735 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 6.0e-12 74.3 94 38.3
Haze_17656 Corylus avellana HOM05D000003 ORTHO05D000167 6.0e-12 74.3 96 39.6
Haze_19506 Corylus avellana HOM05D000003 ORTHO05D000167 6.0e-12 74.3 96 39.6
QL12p001149 Quercus lobata HOM05D000003 ORTHO05D000167 7.8e-12 73.9 97 42.3
Haze_23165 Corylus avellana HOM05D000003 ORTHO05D000167 1.3e-11 73.2 102 37.3
QL05p042365 Quercus lobata HOM05D000003 ORTHO05D000167 1.3e-11 73.2 97 34.0
QL05p065428 Quercus lobata HOM05D000003 ORTHO05D000004 1.3e-11 73.2 100 41.0
Haze_13551 Corylus avellana HOM05D000003 ORTHO05D000167 2.3e-11 72.4 96 37.5
QL11p056556 Quercus lobata HOM05D000003 ORTHO05D000167 2.3e-11 72.4 97 39.2
QL02p034159 Quercus lobata HOM05D016498 ORTHO05D000167 3.9e-11 71.6 97 40.2
CSS0043774 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 5.1e-11 71.2 94 35.1
TWI23G0529 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 8.7e-11 70.5 95 40.0
CSS0016328 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 1.1e-10 70.1 98 38.8
QL08p006218 Quercus lobata HOM05D000003 ORTHO05D000167 2.5e-10 68.9 97 37.1
QL12p015842 Quercus lobata HOM05D000003 ORTHO05D000004 2.5e-10 68.9 90 44.4
TWI31G1374 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.5e-10 68.9 99 36.4
QL01p036379 Quercus lobata HOM05D000003 ORTHO05D000004 3.3e-10 68.6 97 40.2
COL.COLO4_10225 Corchorus olitorius HOM05D000003 ORTHO05D000167 4.3e-10 68.2 96 37.5
QL02p082090 Quercus lobata HOM05D000003 ORTHO05D000167 4.3e-10 68.2 103 35.0
TWI32G0681 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 4.3e-10 68.2 99 36.4
TWI53G0004 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 4.3e-10 68.2 99 36.4
RcHm_v2.0_Chr2g0109541 Rosa chinensis HOM05D009322 ORTHO05D010713 5.6e-10 67.8 103 37.9
QL02p023292 Quercus lobata HOM05D000003 ORTHO05D000167 7.3e-10 67.4 101 37.6
TWI75G0193 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 7.3e-10 67.4 95 38.9
EL10Ac9g21339 Beta vulgaris HOM05D000003 ORTHO05D000167 9.6e-10 67.0 103 37.9
FvH4_6g18902 Fragaria vesca HOM05D000003 ORTHO05D010713 9.6e-10 67.0 102 39.2
TWI14G0340 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 9.6e-10 67.0 99 35.4
COL.COLO4_13164 Corchorus olitorius HOM05D009774 ORTHO05D000167 1.3e-09 66.6 101 34.7
Haze_12823 Corylus avellana HOM05D016039 ORTHO05D000167 1.3e-09 66.6 99 35.4
QL01p048703 Quercus lobata HOM05D000003 ORTHO05D000167 1.3e-09 66.6 97 37.1
Haze_16052 Corylus avellana HOM05D033627 ORTHO05D034205 1.6e-09 66.2 90 38.9
Duzib132G0669 Durio zibethinus HOM05D000003 ORTHO05D000167 1.6e-09 66.2 93 39.8
QL03p054973 Quercus lobata HOM05D016498 ORTHO05D000167 1.6e-09 66.2 84 39.3
QL05p007523 Quercus lobata HOM05D000003 ORTHO05D000167 1.6e-09 66.2 97 40.2
QL07p011546 Quercus lobata HOM05D000003 ORTHO05D000167 1.6e-09 66.2 97 39.2
CSS0031955 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 2.1e-09 65.9 98 36.7
Haze_19825 Corylus avellana HOM05D009031 ORTHO05D000167 2.1e-09 65.9 96 34.4
QL02p009216 Quercus lobata HOM05D000003 ORTHO05D000167 2.1e-09 65.9 94 34.0
QL11p002550 Quercus lobata HOM05D000281 ORTHO05D007047 2.1e-09 65.9 99 35.4
QL12p015728 Quercus lobata HOM05D000003 ORTHO05D000167 2.1e-09 65.9 98 37.8
EL10Ac5g12505 Beta vulgaris HOM05D000003 ORTHO05D000167 2.8e-09 65.5 97 38.1
Hma1.2p1_0989F.1_g244760 Hydrangea macrophylla HOM05D000003 ORTHO05D000006 2.8e-09 65.5 73 46.6
TWI53G0186 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 3.6e-09 65.1 99 43.4
QL04p086930 Quercus lobata HOM05D000003 ORTHO05D000167 4.8e-09 64.7 94 37.2
EL10Ac6g14087 Beta vulgaris HOM05D000003 ORTHO05D000167 6.2e-09 64.3 100 37.0
Haze_25213 Corylus avellana HOM05D000335 ORTHO05D001251 6.2e-09 64.3 82 42.7
QL11p009033 Quercus lobata HOM05D000003 ORTHO05D000004 6.2e-09 64.3 102 36.3
Haze_01709 Corylus avellana HOM05D004092 ORTHO05D005448 8.1e-09 63.9 96 35.4
RcHm_v2.0_Chr7g0203591 Rosa chinensis HOM05D009322 ORTHO05D010713 8.1e-09 63.9 102 35.3
RcHm_v2.0_Chr7g0236061 Rosa chinensis HOM05D000003 ORTHO05D000004 1.1e-08 63.5 103 38.8
TAR199G0001 Trochodendron aralioides HOM05D000003 ORTHO05D000004 1.4e-08 63.2 95 33.7
AUR62034867 Chenopodium quinoa HOM05D000003 ORTHO05D000167 1.8e-08 62.8 99 36.4
QL03p051231 Quercus lobata HOM05D016498 ORTHO05D000167 1.8e-08 62.8 97 37.1
RcHm_v2.0_Chr6g0254571 Rosa chinensis HOM05D009322 ORTHO05D010713 1.8e-08 62.8 102 35.3
QL08p031025 Quercus lobata HOM05D000003 ORTHO05D000004 2.4e-08 62.4 91 36.3
CANSAT56G1507 Cannabis sativa HOM05D000003 ORTHO05D000167 3.1e-08 62.0 99 35.4
EL10Ac7g17531 Beta vulgaris HOM05D000003 ORTHO05D000004 4.0e-08 61.6 99 34.3
EL10Ac9g22665 Beta vulgaris HOM05D000003 ORTHO05D000167 4.0e-08 61.6 99 34.3
CANSAT25G2810 Cannabis sativa HOM05D000003 ORTHO05D000167 4.0e-08 61.6 99 35.4
COL.COLO4_05919 Corchorus olitorius HOM05D009774 ORTHO05D000167 4.0e-08 61.6 97 36.1
COL.COLO4_35519 Corchorus olitorius HOM05D009774 ORTHO05D000167 4.0e-08 61.6 94 36.2
AUR62001182 Chenopodium quinoa HOM05D000003 ORTHO05D000167 5.3e-08 61.2 103 34.0
Prupe.1G179300 Prunus persica HOM05D000003 ORTHO05D006737 5.3e-08 61.2 100 34.0
QL07p036969 Quercus lobata HOM05D000003 ORTHO05D000167 5.3e-08 61.2 97 37.1
Hund26035 Selenicereus undatus HOM05D002335 ORTHO05D006282 6.9e-08 60.8 81 39.5
QL06p048711 Quercus lobata HOM05D000027 ORTHO05D000066 9.0e-08 60.5 80 40.0
QL09p043312 Quercus lobata HOM05D000003 ORTHO05D000167 9.0e-08 60.5 96 37.5
TWI74G1173 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 9.0e-08 60.5 98 35.7
CANSAT01G0793 Cannabis sativa HOM05D000003 ORTHO05D000004 1.2e-07 60.1 99 35.4
CANSAT64G1929 Cannabis sativa HOM05D000003 ORTHO05D000004 1.2e-07 60.1 99 36.4
AUR62013413 Chenopodium quinoa HOM05D000003 ORTHO05D000167 1.2e-07 60.1 99 34.3
FAN28G2522 Fragaria x ananassa HOM05D015403 ORTHO05D010713 1.2e-07 60.1 102 35.3
QL06p034986 Quercus lobata HOM05D000044 ORTHO05D000051 1.2e-07 60.1 97 35.1
TWI63G0799 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 1.2e-07 60.1 96 40.6
QL10p052676 Quercus lobata HOM05D000003 ORTHO05D000167 1.5e-07 59.7 100 35.0
TAR331G0002 Trochodendron aralioides HOM05D000003 ORTHO05D000167 2.0e-07 59.3 95 36.8
CANSAT80G0316 Cannabis sativa HOM05D000003 ORTHO05D000167 2.6e-07 58.9 87 37.9
COL.COLO4_06144 Corchorus olitorius HOM05D009774 ORTHO05D000167 2.6e-07 58.9 96 36.5
FvH4_6g32473 Fragaria vesca HOM05D000003 ORTHO05D010713 2.6e-07 58.9 96 36.5
QL01p015882 Quercus lobata HOM05D000003 ORTHO05D000167 2.6e-07 58.9 99 38.4
QL08p011385 Quercus lobata HOM05D000003 ORTHO05D000167 3.4e-07 58.5 94 36.2
EL10As6g23653 Beta vulgaris HOM05D000003 ORTHO05D000167 4.5e-07 58.2 99 36.4
CANSAT78G2528 Cannabis sativa HOM05D000003 ORTHO05D000167 4.5e-07 58.2 87 39.1
AUR62040400 Chenopodium quinoa HOM05D000003 ORTHO05D000167 4.5e-07 58.2 102 32.4
Haze_13874 Corylus avellana HOM05D016406 ORTHO05D000167 4.5e-07 58.2 102 32.4
PSO541G4554 Papaver somniferum HOM05D007919 ORTHO05D006738 4.5e-07 58.2 99 34.3
QL06p052521 Quercus lobata HOM05D000003 ORTHO05D000167 4.5e-07 58.2 78 42.3
TWI77G0377 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 4.5e-07 58.2 102 36.3
EL10Ac8g19164 Beta vulgaris HOM05D000003 ORTHO05D000167 5.8e-07 57.8 97 34.0
CANSAT78G0193 Cannabis sativa HOM05D000003 ORTHO05D000167 5.8e-07 57.8 100 34.0
COL.COLO4_16438 Corchorus olitorius HOM05D009774 ORTHO05D000167 5.8e-07 57.8 95 32.6
COL.COLO4_23207 Corchorus olitorius HOM05D009774 ORTHO05D000167 5.8e-07 57.8 98 34.7
Dinv32432 Davidia involucrata HOM05D000003 ORTHO05D011454 5.8e-07 57.8 95 36.8
QL11p000147 Quercus lobata HOM05D000003 ORTHO05D000167 5.8e-07 57.8 97 35.1
CANSAT01G1451 Cannabis sativa HOM05D000003 ORTHO05D000167 7.6e-07 57.4 99 35.4
CANSAT01G2406 Cannabis sativa HOM05D000003 ORTHO05D000167 7.6e-07 57.4 99 34.3
CANSAT80G2787 Cannabis sativa HOM05D000003 ORTHO05D000167 7.6e-07 57.4 87 36.8
AUR62032100 Chenopodium quinoa HOM05D000003 ORTHO05D000167 7.6e-07 57.4 94 34.0
Haze_19830 Corylus avellana HOM05D009031 ORTHO05D000167 7.6e-07 57.4 97 32.0
Dinv37210 Davidia involucrata HOM05D000003 ORTHO05D000167 7.6e-07 57.4 94 36.2
Duzib147G0364 Durio zibethinus HOM05D000003 ORTHO05D000167 7.6e-07 57.4 97 32.0
FvH4_6g19251 Fragaria vesca HOM05D000003 ORTHO05D000004 7.6e-07 57.4 101 34.7
CANSAT54G2704 Cannabis sativa HOM05D000003 ORTHO05D000167 9.9e-07 57.0 99 34.3
QL10p056321 Quercus lobata HOM05D000003 ORTHO05D000167 9.9e-07 57.0 95 33.7
CSS0003020 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 1.3e-06 56.6 100 36.0
CANSAT56G3196 Cannabis sativa HOM05D000003 ORTHO05D000167 1.3e-06 56.6 100 31.0
Haze_05315 Corylus avellana HOM05D022711 ORTHO05D000126 1.3e-06 56.6 95 36.8
Dinv08495 Davidia involucrata HOM05D000003 ORTHO05D000167 1.3e-06 56.6 94 36.2
Dinv08915 Davidia involucrata HOM05D000003 ORTHO05D000167 1.3e-06 56.6 99 33.3
FvH4_1g18911 Fragaria vesca HOM05D009322 ORTHO05D010713 1.3e-06 56.6 102 34.3
Prupe.6G203400 Prunus persica HOM05D000003 ORTHO05D000167 1.3e-06 56.6 93 34.4
QL02p097725 Quercus lobata HOM05D000003 ORTHO05D000004 1.3e-06 56.6 94 35.1
CANSAT54G2214 Cannabis sativa HOM05D000003 ORTHO05D000167 1.7e-06 56.2 101 36.6
CANSAT80G0788 Cannabis sativa HOM05D000003 ORTHO05D000167 1.7e-06 56.2 98 33.7
AUR62020673 Chenopodium quinoa HOM05D000003 ORTHO05D000167 1.7e-06 56.2 99 34.3
Duzib027G0001 Durio zibethinus HOM05D000003 ORTHO05D000167 1.7e-06 56.2 97 32.0
Lj2g0007703 Lotus japonicus HOM05D000003 ORTHO05D000126 1.7e-06 56.2 94 38.3
QL05p051227 Quercus lobata HOM05D000003 ORTHO05D000004 1.7e-06 56.2 95 35.8
QL93p0138_0008 Quercus lobata HOM05D000003 ORTHO05D000167 1.7e-06 56.2 95 35.8
CANSAT11G2397 Cannabis sativa HOM05D000003 ORTHO05D000167 2.2e-06 55.8 97 35.1
CANSAT21G0177 Cannabis sativa HOM05D000003 ORTHO05D000167 2.2e-06 55.8 101 30.7
CANSAT56G1552 Cannabis sativa HOM05D000003 ORTHO05D000004 2.2e-06 55.8 101 35.6
QL02p087824 Quercus lobata HOM05D000003 ORTHO05D000167 2.2e-06 55.8 95 36.8
QL05p060814 Quercus lobata HOM05D000003 ORTHO05D000167 2.2e-06 55.8 95 35.8
QL12p001891 Quercus lobata HOM05D000003 ORTHO05D000167 2.2e-06 55.8 100 33.0
TWI09G0364 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 2.2e-06 55.8 95 36.8
CANSAT25G3211 Cannabis sativa HOM05D000003 ORTHO05D000167 2.9e-06 55.5 99 34.3
AUR62019632 Chenopodium quinoa HOM05D018709 ORTHO05D000167 2.9e-06 55.5 98 33.7
COL.COLO4_20671 Corchorus olitorius HOM05D000003 ORTHO05D000167 2.9e-06 55.5 87 36.8
Haze_05255 Corylus avellana HOM05D000111 ORTHO05D001334 2.9e-06 55.5 102 30.4
FvH4_6g12311 Fragaria vesca HOM05D000003 ORTHO05D000004 2.9e-06 55.5 97 39.2
QL12p032525 Quercus lobata HOM05D000003 ORTHO05D000167 2.9e-06 55.5 93 29.0
Sed0016476 Sechium edule HOM05D024375 ORTHO05D000167 2.9e-06 55.5 96 36.5
CANSAT11G0285 Cannabis sativa HOM05D000003 ORTHO05D000167 3.8e-06 55.1 99 34.3
CANSAT64G0935 Cannabis sativa HOM05D000003 ORTHO05D000167 3.8e-06 55.1 98 34.7
CANSAT78G1758 Cannabis sativa HOM05D000003 ORTHO05D000004 3.8e-06 55.1 87 35.6
TWI38G0639 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 3.8e-06 55.1 95 34.7
EL10Ac2g03044 Beta vulgaris HOM05D000003 ORTHO05D000006 4.9e-06 54.7 98 35.7
EL10Ac4g09190 Beta vulgaris HOM05D000003 ORTHO05D000167 4.9e-06 54.7 99 36.4
CANSAT21G1100 Cannabis sativa HOM05D000003 ORTHO05D000167 4.9e-06 54.7 98 29.6
Cfa019600 Carpinus fangiana HOM05D012052 ORTHO05D000167 4.9e-06 54.7 69 40.6
AUR62026326 Chenopodium quinoa HOM05D000003 ORTHO05D000167 4.9e-06 54.7 99 31.3
Haze_10748 Corylus avellana HOM05D017217 ORTHO05D022283 4.9e-06 54.7 55 38.2
QL12p021712 Quercus lobata HOM05D000003 ORTHO05D000167 4.9e-06 54.7 95 31.6
EL10Ac6g14583 Beta vulgaris HOM05D000003 ORTHO05D000167 6.4e-06 54.3 94 34.0
CANSAT54G0374 Cannabis sativa HOM05D000003 ORTHO05D000004 6.4e-06 54.3 99 31.3
CiPaw.16G012000 Carya illinoinensis HOM05D000003 ORTHO05D000006 6.4e-06 54.3 101 31.7
Dinv21289 Davidia involucrata HOM05D000079 ORTHO05D000211 6.4e-06 54.3 93 36.6
FvH4_4g11881 Fragaria vesca HOM05D000003 ORTHO05D000006 6.4e-06 54.3 86 36.0
Lj9P307T25 Lonicera japonica HOM05D000003 ORTHO05D000167 6.4e-06 54.3 96 35.4
QL04p033465 Quercus lobata HOM05D000003 ORTHO05D011877 6.4e-06 54.3 94 33.0
QL04p056296 Quercus lobata HOM05D000003 ORTHO05D000004 6.4e-06 54.3 99 32.3
RcHm_v2.0_Chr7g0229351 Rosa chinensis HOM05D009322 ORTHO05D010713 6.4e-06 54.3 99 35.4
CANSAT01G1170 Cannabis sativa HOM05D000003 ORTHO05D000167 8.4e-06 53.9 85 34.1
CANSAT11G2042 Cannabis sativa HOM05D000003 ORTHO05D000167 8.4e-06 53.9 82 34.1
CANSAT25G2525 Cannabis sativa HOM05D000003 ORTHO05D000004 8.4e-06 53.9 101 32.7
Cfa002259 Carpinus fangiana HOM05D012052 ORTHO05D000167 8.4e-06 53.9 80 33.8
Haze_07857 Corylus avellana HOM05D006860 ORTHO05D009547 8.4e-06 53.9 81 34.6
QL08p045811 Quercus lobata HOM05D031275 ORTHO05D000167 8.4e-06 53.9 74 36.5
Sed0025544 Sechium edule HOM05D000003 ORTHO05D000167 8.4e-06 53.9 103 30.1


User provided reference genes

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