Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p017619 Quercus lobata HOM05D000163 ORTHO05D000962 1.5e-33 145.6 71 100.0
QL08p048664 Quercus lobata HOM05D000163 ORTHO05D000962 1.6e-16 89.0 52 78.8
Haze_15508 Corylus avellana HOM05D000163 ORTHO05D000962 2.2e-13 78.6 64 60.9
Potri.002G160200 Populus trichocarpa HOM05D000163 ORTHO05D000962 2.9e-13 78.2 53 67.9
Sabra14G0061600 Salix brachista HOM05D000163 ORTHO05D000962 1.1e-12 76.3 65 55.4
Cfa003922 Carpinus fangiana HOM05D000163 ORTHO05D000962 1.0e-10 69.7 60 58.3
Sabra02G0127200 Salix brachista HOM05D000163 ORTHO05D000962 1.7e-10 68.9 52 59.6
TWI59G0392 Tripterygium wilfordii HOM05D000163 ORTHO05D000962 2.3e-10 68.6 45 64.4
TWI59G0515 Tripterygium wilfordii HOM05D000163 ORTHO05D000962 2.3e-10 68.6 45 62.2
Ciclev10018795m.g Citrus clementina HOM05D000163 ORTHO05D000962 3.0e-10 68.2 45 68.9
Thecc.01G358700 Theobroma cacao HOM05D000163 ORTHO05D000962 3.0e-10 68.2 52 63.5
Potri.014G084900 Populus trichocarpa HOM05D000163 ORTHO05D000962 3.9e-10 67.8 68 51.5
THA.LOC104802032 Tarenaya hassleriana HOM05D000163 ORTHO05D000962 5.1e-10 67.4 47 61.7
Glyma.03G008800 Glycine max HOM05D000163 ORTHO05D000962 8.6e-10 66.6 52 55.8
CiPaw.01G062000 Carya illinoinensis HOM05D000163 ORTHO05D000962 2.5e-09 65.1 65 47.7
COL.COLO4_12716 Corchorus olitorius HOM05D000163 ORTHO05D000962 2.5e-09 65.1 52 57.7
Lj3g0022452 Lotus japonicus HOM05D000163 ORTHO05D000962 3.3e-09 64.7 47 57.4
THA.LOC104817292 Tarenaya hassleriana HOM05D000163 ORTHO05D000962 3.3e-09 64.7 47 59.6
FAN10G2151 Fragaria x ananassa HOM05D000163 ORTHO05D000962 4.3e-09 64.3 52 53.8
FAN10G2422 Fragaria x ananassa HOM05D000163 ORTHO05D000962 4.3e-09 64.3 52 53.8
MD07G1136700 Malus domestica HOM05D000163 ORTHO05D000962 4.3e-09 64.3 54 55.6
VMungo0331G0424 Vigna mungo HOM05D000163 ORTHO05D000962 4.3e-09 64.3 52 51.9
BcaC02g12167 Brassica carinata HOM05D000163 ORTHO05D000962 5.6e-09 63.9 44 61.4
FAN01G1922 Fragaria x ananassa HOM05D000163 ORTHO05D000962 5.6e-09 63.9 52 53.8
Gohir.A07G142300 Gossypium hirsutum HOM05D000163 ORTHO05D000962 5.6e-09 63.9 52 57.7
Gohir.D07G148200 Gossypium hirsutum HOM05D000163 ORTHO05D000962 5.6e-09 63.9 52 55.8
Gorai.001G169300 Gossypium raimondii HOM05D000163 ORTHO05D000962 5.6e-09 63.9 52 55.8
PGR042G1205 Punica granatum HOM05D000163 ORTHO05D000962 5.6e-09 63.9 52 53.8
Duzib268G0051 Durio zibethinus HOM05D000163 ORTHO05D000962 7.3e-09 63.5 47 63.8
Phvul.010G099400 Phaseolus vulgaris HOM05D000163 ORTHO05D000962 7.3e-09 63.5 50 52.0
QL08p048587 Quercus lobata HOM05D000163 ORTHO05D000962 7.3e-09 63.5 62 50.0
FAN06G1246 Fragaria x ananassa HOM05D000163 ORTHO05D000962 9.5e-09 63.2 52 51.9
Glyma.07G070300 Glycine max HOM05D000163 ORTHO05D000962 9.5e-09 63.2 52 51.9
Psat3g108160 Pisum sativum HOM05D000163 ORTHO05D000962 9.5e-09 63.2 57 54.4
TPR.G37712 Trifolium pratense HOM05D000163 ORTHO05D000962 9.5e-09 63.2 51 54.9
BcaC02g12168 Brassica carinata HOM05D000163 ORTHO05D000962 1.2e-08 62.8 44 59.1
A05p05880 Brassica napus HOM05D000163 ORTHO05D000962 1.2e-08 62.8 44 59.1
C04p06820 Brassica napus HOM05D000163 ORTHO05D000962 1.2e-08 62.8 44 59.1
BolC4t22304H Brassica oleracea HOM05D000163 ORTHO05D000962 1.2e-08 62.8 44 59.1
BraA05t19552Z Brassica rapa HOM05D000163 ORTHO05D000962 1.2e-08 62.8 44 59.1
FvH4_7g14340 Fragaria vesca HOM05D000163 ORTHO05D000962 1.2e-08 62.8 52 51.9
FAN06G4853 Fragaria x ananassa HOM05D000163 ORTHO05D000962 1.2e-08 62.8 52 51.9
QL04p027846 Quercus lobata HOM05D000163 ORTHO05D000962 1.2e-08 62.8 62 50.0
Cpa.g.sc11.7 Carica papaya HOM05D000163 ORTHO05D000962 1.6e-08 62.4 52 53.8
FAN03G3345 Fragaria x ananassa HOM05D000163 ORTHO05D000962 1.6e-08 62.4 47 55.3
QL08p048359 Quercus lobata HOM05D000163 ORTHO05D000962 1.6e-08 62.4 52 57.7
Nn6g33410 Nelumbo nucifera HOM05D000163 ORTHO05D000962 2.1e-08 62.0 53 58.5
Cfa003919 Carpinus fangiana HOM05D000163 ORTHO05D000962 2.8e-08 61.6 36 69.4
CiPaw.02G031300 Carya illinoinensis HOM05D000163 ORTHO05D000962 2.8e-08 61.6 67 50.7
Ca_07924_v3 Cicer arietinum L. HOM05D000163 ORTHO05D000962 2.8e-08 61.6 49 55.1
Lalb_Chr17g0339571 Lupinus albus HOM05D000163 ORTHO05D000962 2.8e-08 61.6 48 56.2
CANSAT56G2922 Cannabis sativa HOM05D000163 ORTHO05D000962 3.6e-08 61.2 47 57.4
Hma1.2p1_2503F.1_g323410 Hydrangea macrophylla HOM05D000163 ORTHO05D000962 3.6e-08 61.2 62 45.2
TAR629G0137 Trochodendron aralioides HOM05D000163 ORTHO05D000962 3.6e-08 61.2 62 45.2
CiPaw.02G031500 Carya illinoinensis HOM05D000163 ORTHO05D000962 4.7e-08 60.8 52 50.0
Sp4g27980 Schrenkiella parvula HOM05D000163 ORTHO05D000962 4.7e-08 60.8 45 57.8
Aa31LG1G27350 Aethionema arabicum HOM05D000163 ORTHO05D000962 6.2e-08 60.5 45 57.8
RcHm_v2.0_Chr1g0355361 Rosa chinensis HOM05D000163 ORTHO05D000962 6.2e-08 60.5 58 46.6
Thhalv10001310m.g Eutrema salsugineum HOM05D000163 ORTHO05D000962 8.1e-08 60.1 45 57.8
FvH4_4g25760 Fragaria vesca HOM05D000426 ORTHO05D006588 8.1e-08 60.1 43 60.5
FAN12G2959 Fragaria x ananassa HOM05D000426 ORTHO05D006588 8.1e-08 60.1 43 60.5
Medtr8g030700 Medicago truncatula HOM05D000163 ORTHO05D000962 8.1e-08 60.1 52 51.9
FAN09G1284 Fragaria x ananassa HOM05D000163 ORTHO05D000962 1.1e-07 59.7 52 53.8
TAR624G0291 Trochodendron aralioides HOM05D002312 ORTHO05D000962 1.1e-07 59.7 52 55.8
BcaC02g07068 Brassica carinata HOM05D000163 ORTHO05D000962 1.4e-07 59.3 44 59.1
CSS0038925 Camellia sinensis var. sinensis HOM05D000163 ORTHO05D000962 1.4e-07 59.3 53 47.2
CiPaw.02G031100 Carya illinoinensis HOM05D000163 ORTHO05D000962 1.4e-07 59.3 39 66.7
Glyma.18G233500 Glycine max HOM05D000163 ORTHO05D000962 1.4e-07 59.3 51 49.0
Lsat_1_v5_gn_3_137260 Lactuca sativa HOM05D000163 ORTHO05D000962 1.4e-07 59.3 54 50.0
Lalb_Chr10g0096901 Lupinus albus HOM05D000163 ORTHO05D000962 1.4e-07 59.3 65 41.5
TAR375G1116 Trochodendron aralioides HOM05D000163 ORTHO05D000962 1.4e-07 59.3 52 55.8
VMungo1383G3455 Vigna mungo HOM05D000163 ORTHO05D000962 1.4e-07 59.3 51 49.0
Carub.0004s2861 Capsella rubella HOM05D000163 ORTHO05D000962 1.8e-07 58.9 45 55.6
Ciclev10006472m.g Citrus clementina HOM05D000163 ORTHO05D000962 1.8e-07 58.9 65 43.1
Haze_15512 Corylus avellana HOM05D000163 ORTHO05D000962 1.8e-07 58.9 36 66.7
Psat4g155960 Pisum sativum HOM05D000163 ORTHO05D000962 1.8e-07 58.9 52 46.2
GSVIVG01026936001 Vitis vinifera HOM05D000163 ORTHO05D000962 1.8e-07 58.9 44 56.8
Cfa003923 Carpinus fangiana HOM05D000163 ORTHO05D000962 2.4e-07 58.5 49 61.2
Dinv43820 Davidia involucrata HOM05D000163 ORTHO05D000962 2.4e-07 58.5 45 53.3
AL4G45120 Arabidopsis lyrata HOM05D000163 ORTHO05D000962 3.1e-07 58.2 45 55.6
AT2G45910 Arabidopsis thaliana HOM05D000163 ORTHO05D000962 3.1e-07 58.2 45 55.6
Dinv32488 Davidia involucrata HOM05D000163 ORTHO05D000962 3.1e-07 58.2 45 53.3
A04p34130 Brassica napus HOM05D000163 ORTHO05D000962 4.0e-07 57.8 44 54.5
CiPaw.02G031200 Carya illinoinensis HOM05D000163 ORTHO05D000962 4.0e-07 57.8 39 66.7
ClCG05G001490 Citrullus lanatus HOM05D000163 ORTHO05D000962 4.0e-07 57.8 52 46.2
MELO3C006106.2 Cucumis melo HOM05D000163 ORTHO05D000962 4.0e-07 57.8 52 48.1
Glyma.09G259100 Glycine max HOM05D000163 ORTHO05D000962 4.0e-07 57.8 51 49.0
Actinidia12701 Actinidia chinensis HOM05D000163 ORTHO05D000962 5.2e-07 57.4 44 50.0
CsaV3_3G008870 Cucumis sativus L. HOM05D000163 ORTHO05D000962 5.2e-07 57.4 52 46.2
Duzib138G0859 Durio zibethinus HOM05D000163 ORTHO05D000962 5.2e-07 57.4 52 53.8
BcaC02g07067 Brassica carinata HOM05D000163 ORTHO05D000962 6.8e-07 57.0 44 54.5
BolC4t28691H Brassica oleracea HOM05D000163 ORTHO05D000962 6.8e-07 57.0 44 54.5
Cpa.g.sc107.75 Carica papaya HOM05D000163 ORTHO05D000962 6.8e-07 57.0 47 53.2
Rhsim07G0014200 Rhododendron simsii HOM05D000163 ORTHO05D000962 6.8e-07 57.0 56 48.2
BraA04t18874Z Brassica rapa HOM05D000163 ORTHO05D000962 8.9e-07 56.6 44 54.5
CiPaw.01G061700 Carya illinoinensis HOM05D000163 ORTHO05D000962 8.9e-07 56.6 47 51.1
Lj1g0015010 Lotus japonicus HOM05D000163 ORTHO05D000962 8.9e-07 56.6 53 49.1
MD01G1061400 Malus domestica HOM05D000163 ORTHO05D000962 8.9e-07 56.6 38 60.5
Hma1.2p1_0001F.1_g001180 Hydrangea macrophylla HOM05D000163 ORTHO05D000962 1.2e-06 56.2 45 55.6
Phvul.008G062200 Phaseolus vulgaris HOM05D000163 ORTHO05D000962 1.2e-06 56.2 51 47.1
TPR.G10317 Trifolium pratense HOM05D000163 ORTHO05D000962 1.2e-06 56.2 40 57.5
C04p71930 Brassica napus HOM05D000163 ORTHO05D000962 1.5e-06 55.8 44 54.5
CSS0044084 Camellia sinensis var. sinensis HOM05D000163 ORTHO05D000962 1.5e-06 55.8 50 46.0
Rhsim07G0014700 Rhododendron simsii HOM05D000163 ORTHO05D000962 1.5e-06 55.8 52 44.2
Eucgr.E00122 Eucalyptus grandis HOM05D000163 ORTHO05D000962 2.0e-06 55.5 56 50.0
arahy.Tifrunner.gnm1.ann1.CDHX4V Arachis hypogaea HOM05D000163 ORTHO05D000962 2.6e-06 55.1 48 52.1
arahy.Tifrunner.gnm1.ann1.KQ7CFK Arachis hypogaea HOM05D000163 ORTHO05D000962 2.6e-06 55.1 48 52.1
EL10Ac1g00413 Beta vulgaris HOM05D000163 ORTHO05D000962 3.4e-06 54.7 47 53.2
Lalb_Chr19g0126921 Lupinus albus HOM05D000163 ORTHO05D000962 3.4e-06 54.7 44 50.0
MD01G1205000 Malus domestica HOM05D000163 ORTHO05D000962 3.4e-06 54.7 44 54.5
Prupe.2G297400 Prunus persica HOM05D000163 ORTHO05D000962 3.4e-06 54.7 52 48.1
Hund27271 Selenicereus undatus HOM05D000163 ORTHO05D000962 3.4e-06 54.7 53 50.9
Actinidia34132 Actinidia chinensis HOM05D000163 ORTHO05D000962 4.4e-06 54.3 52 48.1
Nitab4.5_0000583g0130 Nicotiana tabacum HOM05D000163 ORTHO05D000962 4.4e-06 54.3 51 49.0
Sed0001687 Sechium edule HOM05D000163 ORTHO05D000962 4.4e-06 54.3 52 42.3
arahy.Tifrunner.gnm1.ann1.4J5UF2 Arachis hypogaea HOM05D000163 ORTHO05D000962 5.8e-06 53.9 52 46.2
Lj7C511T21 Lonicera japonica HOM05D000163 ORTHO05D000962 5.8e-06 53.9 41 53.7
Rhsim07G0014600 Rhododendron simsii HOM05D000163 ORTHO05D000962 5.8e-06 53.9 56 48.2
Actinidia10008 Actinidia chinensis HOM05D000163 ORTHO05D000962 7.6e-06 53.5 45 48.9
arahy.Tifrunner.gnm1.ann1.ZH3B41 Arachis hypogaea HOM05D000163 ORTHO05D000962 7.6e-06 53.5 52 46.2
Cfa003916 Carpinus fangiana HOM05D000163 ORTHO05D000962 7.6e-06 53.5 35 62.9
Haze_15515 Corylus avellana HOM05D000163 ORTHO05D000962 7.6e-06 53.5 37 59.5
PSO478G2536 Papaver somniferum HOM05D000163 ORTHO05D000962 7.6e-06 53.5 37 56.8
PSO782G5476 Papaver somniferum HOM05D000163 ORTHO05D000962 7.6e-06 53.5 37 56.8
QL08p048556 Quercus lobata HOM05D000163 ORTHO05D000962 7.6e-06 53.5 51 52.9
Rhsim07G0014500 Rhododendron simsii HOM05D000163 ORTHO05D000962 7.6e-06 53.5 56 48.2
vmacro13271 Vaccinium macrocarpon HOM05D000163 ORTHO05D000962 7.6e-06 53.5 38 50.0
vmacro23335 Vaccinium macrocarpon HOM05D000163 ORTHO05D000962 7.6e-06 53.5 38 50.0
Haze_15517 Corylus avellana HOM05D000163 ORTHO05D000962 9.9e-06 53.1 52 48.1
HanXRQChr13g0426571 Helianthus annuus HOM05D000163 ORTHO05D000962 9.9e-06 53.1 41 46.3
Nitab4.5_0009911g0010 Nicotiana tabacum HOM05D000163 ORTHO05D000962 9.9e-06 53.1 51 49.0


User provided reference genes

Program Settings