Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p016640 Quercus lobata HOM05D000615 ORTHO05D000447 9.0e-95 350.1 164 100.0
QL05p007108 Quercus lobata HOM05D000615 ORTHO05D000447 1.7e-24 116.7 287 30.7
QL05p007135 Quercus lobata HOM05D000615 ORTHO05D000447 8.3e-24 114.4 283 31.1
QL05p006997 Quercus lobata HOM05D000615 ORTHO05D000447 1.0e-21 107.5 96 54.2
QL05p007021 Quercus lobata HOM05D000615 ORTHO05D000447 1.1e-18 97.4 106 50.0
QL06p015565 Quercus lobata HOM05D000615 ORTHO05D000447 4.4e-17 92.0 114 40.4
QL06p015507 Quercus lobata HOM05D000615 ORTHO05D000447 7.6e-17 91.3 114 40.4
CiPaw.01G191000 Carya illinoinensis HOM05D000615 ORTHO05D000447 2.2e-16 89.7 145 35.9
Haze_11285 Corylus avellana HOM05D000615 ORTHO05D000447 3.8e-16 89.0 112 39.3
Cfa008386 Carpinus fangiana HOM05D000615 ORTHO05D000447 4.9e-16 88.6 112 39.3
QL06p015499 Quercus lobata HOM05D000615 ORTHO05D000447 4.9e-16 88.6 114 39.5
QL06p015544 Quercus lobata HOM05D000615 ORTHO05D000447 4.9e-16 88.6 114 39.5
QL05p007029 Quercus lobata HOM05D000615 ORTHO05D000447 8.4e-16 87.8 64 71.9
CiPaw.01G191200 Carya illinoinensis HOM05D000615 ORTHO05D000447 2.4e-15 86.3 112 37.5
CiPaw.01G191300 Carya illinoinensis HOM05D000615 ORTHO05D000447 2.4e-15 86.3 112 37.5
QL06p015469 Quercus lobata HOM05D000615 ORTHO05D000447 4.2e-15 85.5 114 38.6
FvH4_4g02480 Fragaria vesca HOM05D000615 ORTHO05D000447 5.4e-15 85.1 292 22.3
FAN12G4284 Fragaria x ananassa HOM05D000615 ORTHO05D000447 5.4e-15 85.1 292 22.3
FAN17G0093 Fragaria x ananassa HOM05D000615 ORTHO05D000447 5.4e-15 85.1 292 22.3
Lsat_1_v5_gn_6_14061 Lactuca sativa HOM05D000615 ORTHO05D000447 7.1e-15 84.7 136 33.1
Prupe.1G028500 Prunus persica HOM05D000615 ORTHO05D000447 2.7e-14 82.8 113 38.1
RcHm_v2.0_Chr4g0389901 Rosa chinensis HOM05D000615 ORTHO05D000447 2.7e-14 82.8 295 22.7
CiPaw.01G191400 Carya illinoinensis HOM05D000615 ORTHO05D000447 3.5e-14 82.4 112 36.6
arahy.Tifrunner.gnm1.ann1.N9PH3H Arachis hypogaea HOM05D000615 ORTHO05D000447 4.6e-14 82.0 259 23.6
Prupe.1G029100 Prunus persica HOM05D000615 ORTHO05D000447 1.0e-13 80.9 108 37.0
VMungo0720G1150 Vigna mungo HOM05D000615 ORTHO05D000447 1.0e-13 80.9 104 35.6
CiPaw.01G191800 Carya illinoinensis HOM05D000615 ORTHO05D000447 1.3e-13 80.5 112 35.7
arahy.Tifrunner.gnm1.ann1.7FGL0C Arachis hypogaea HOM05D000615 ORTHO05D000447 1.7e-13 80.1 157 29.9
CiPaw.01G190900 Carya illinoinensis HOM05D000615 ORTHO05D000447 1.7e-13 80.1 116 37.1
MD13G1206000 Malus domestica HOM05D000615 ORTHO05D000447 1.7e-13 80.1 95 40.0
Prupe.1G029000 Prunus persica HOM05D000615 ORTHO05D000447 1.7e-13 80.1 105 38.1
Prupe.1G028400 Prunus persica HOM05D000615 ORTHO05D000447 2.3e-13 79.7 98 37.8
arahy.Tifrunner.gnm1.ann1.YILV44 Arachis hypogaea HOM05D000615 ORTHO05D000447 3.0e-13 79.3 125 33.6
FvH4_6g05920 Fragaria vesca HOM05D000615 ORTHO05D000447 3.0e-13 79.3 104 35.6
arahy.Tifrunner.gnm1.ann1.0FAD3S Arachis hypogaea HOM05D000615 ORTHO05D000447 3.9e-13 79.0 104 37.5
FAN11G2647 Fragaria x ananassa HOM05D000615 ORTHO05D000447 3.9e-13 79.0 104 35.6
MD16G1207500 Malus domestica HOM05D000615 ORTHO05D000447 3.9e-13 79.0 98 39.8
MD16G1207600 Malus domestica HOM05D000615 ORTHO05D000447 3.9e-13 79.0 98 39.8
Prupe.1G028800 Prunus persica HOM05D000615 ORTHO05D000447 3.9e-13 79.0 95 40.0
MD13G1205900 Malus domestica HOM05D000615 ORTHO05D000447 5.1e-13 78.6 98 37.8
Phvul.L001759 Phaseolus vulgaris HOM05D000615 ORTHO05D000447 5.1e-13 78.6 104 33.7
RcHm_v2.0_Chr4g0389791 Rosa chinensis HOM05D000615 ORTHO05D000447 5.1e-13 78.6 98 36.7
RcHm_v2.0_Chr4g0389751 Rosa chinensis HOM05D000615 ORTHO05D000447 6.6e-13 78.2 145 29.7
FvH4_4g02460 Fragaria vesca HOM05D000615 ORTHO05D000447 8.7e-13 77.8 98 36.7
RcHm_v2.0_Chr4g0412411 Rosa chinensis HOM05D000615 ORTHO05D000447 8.7e-13 77.8 95 36.8
FAN17G2191 Fragaria x ananassa HOM05D000615 ORTHO05D000447 1.1e-12 77.4 98 36.7
Glyma.10G185800 Glycine max HOM05D000615 ORTHO05D000447 1.1e-12 77.4 104 32.7
Sabra17G0063100 Salix brachista HOM05D000615 ORTHO05D000447 1.1e-12 77.4 113 33.6
Sabra17G0063500 Salix brachista HOM05D000615 ORTHO05D000447 1.1e-12 77.4 113 33.6
CiPaw.01G191900 Carya illinoinensis HOM05D000615 ORTHO05D000447 1.5e-12 77.0 91 41.8
FvH4_4g02370 Fragaria vesca HOM05D000615 ORTHO05D000447 1.5e-12 77.0 104 35.6
FvH4_4g02430 Fragaria vesca HOM05D000615 ORTHO05D000447 1.9e-12 76.6 104 35.6
FAN12G2024 Fragaria x ananassa HOM05D000615 ORTHO05D000447 1.9e-12 76.6 98 35.7
FAN17G1035 Fragaria x ananassa HOM05D000615 ORTHO05D000447 1.9e-12 76.6 104 35.6
FAN22G2002 Fragaria x ananassa HOM05D000615 ORTHO05D000447 1.9e-12 76.6 104 35.6
RcHm_v2.0_Chr4g0389771 Rosa chinensis HOM05D000615 ORTHO05D000447 1.9e-12 76.6 131 29.8
arahy.Tifrunner.gnm1.ann1.89XXPU Arachis hypogaea HOM05D000615 ORTHO05D000447 2.5e-12 76.3 101 35.6
Glyma.20G204400 Glycine max HOM05D000615 ORTHO05D000447 3.3e-12 75.9 104 32.7
Medtr1g075095 Medicago truncatula HOM05D000615 ORTHO05D000447 5.6e-12 75.1 95 37.9
CANSAT21G1809 Cannabis sativa HOM05D000615 ORTHO05D000447 7.3e-12 74.7 98 35.7
CANSAT78G1655 Cannabis sativa HOM05D000615 ORTHO05D000447 7.3e-12 74.7 95 35.8
Medtr1g075030 Medicago truncatula HOM05D000615 ORTHO05D000447 7.3e-12 74.7 98 37.8
CANSAT78G1350 Cannabis sativa HOM05D000615 ORTHO05D000447 9.6e-12 74.3 95 34.7
CANSAT78G0132 Cannabis sativa HOM05D000615 ORTHO05D000447 1.2e-11 73.9 109 34.9
Dinv25714 Davidia involucrata HOM05D000615 ORTHO05D000447 1.6e-11 73.6 93 37.6
arahy.Tifrunner.gnm1.ann1.D1TD5B Arachis hypogaea HOM05D000615 ORTHO05D000447 2.1e-11 73.2 95 33.7
QL06p015434 Quercus lobata HOM05D000615 ORTHO05D000447 2.1e-11 73.2 112 36.6
Lsat_1_v5_gn_9_71080 Lactuca sativa HOM05D000615 ORTHO05D000447 2.8e-11 72.8 89 33.7
arahy.Tifrunner.gnm1.ann1.4D3FVT Arachis hypogaea HOM05D000615 ORTHO05D000447 3.6e-11 72.4 91 34.1
Lsat_1_v5_gn_5_90081 Lactuca sativa HOM05D000615 ORTHO05D000447 3.6e-11 72.4 89 34.8
VMungo0720G3187 Vigna mungo HOM05D000615 ORTHO05D000447 3.6e-11 72.4 101 32.7
Ca_09829_v3 Cicer arietinum L. HOM05D000615 ORTHO05D000447 6.2e-11 71.6 98 34.7
HanXRQChr07g0199071 Helianthus annuus HOM05D000615 ORTHO05D000447 6.2e-11 71.6 138 26.8
Medtr1g074950 Medicago truncatula HOM05D000615 ORTHO05D000447 6.2e-11 71.6 108 34.3
Lsat_1_v5_gn_2_90981 Lactuca sativa HOM05D000615 ORTHO05D000447 8.1e-11 71.2 140 28.6
TPR.G28506 Trifolium pratense HOM05D000615 ORTHO05D000447 8.1e-11 71.2 110 32.7
arahy.Tifrunner.gnm1.ann1.GVM1TH Arachis hypogaea HOM05D000615 ORTHO05D000447 1.1e-10 70.9 91 33.0
CiPaw.01G191700 Carya illinoinensis HOM05D000615 ORTHO05D000447 1.1e-10 70.9 109 33.9
Lsat_1_v5_gn_2_91021 Lactuca sativa HOM05D000615 ORTHO05D000447 1.1e-10 70.9 139 28.8
QL05p007006 Quercus lobata HOM05D000615 ORTHO05D000447 1.1e-10 70.9 62 58.1
Lsat_1_v5_gn_9_71101 Lactuca sativa HOM05D000615 ORTHO05D000447 1.4e-10 70.5 89 32.6
Medtr1g074990 Medicago truncatula HOM05D000615 ORTHO05D000447 1.8e-10 70.1 98 34.7
Potri.001G340600 Populus trichocarpa HOM05D000615 ORTHO05D000447 1.8e-10 70.1 93 36.6
HanXRQChr13g0404591 Helianthus annuus HOM05D000615 ORTHO05D000447 2.4e-10 69.7 89 34.8
Lj5g0018723 Lotus japonicus HOM05D000615 ORTHO05D000447 2.4e-10 69.7 268 22.0
Psat6g128360 Pisum sativum HOM05D000615 ORTHO05D000447 2.4e-10 69.7 95 33.7
CSS0049141 Camellia sinensis var. sinensis HOM05D000615 ORTHO05D000447 3.1e-10 69.3 91 37.4
CSS0024906 Camellia sinensis var. sinensis HOM05D000615 ORTHO05D000447 4.0e-10 68.9 91 38.5
CSS0044624 Camellia sinensis var. sinensis HOM05D000615 ORTHO05D000447 4.0e-10 68.9 91 38.5
HanXRQChr07g0199061 Helianthus annuus HOM05D000615 ORTHO05D000447 4.0e-10 68.9 92 34.8
Potri.017G071000 Populus trichocarpa HOM05D000615 ORTHO05D000447 4.0e-10 68.9 116 31.9
QL06p015361 Quercus lobata HOM05D000615 ORTHO05D000447 4.0e-10 68.9 95 37.9
CSS0035093 Camellia sinensis var. sinensis HOM05D000615 ORTHO05D000447 5.2e-10 68.6 93 38.7
Potri.001G340300 Populus trichocarpa HOM05D000615 ORTHO05D000447 5.2e-10 68.6 93 35.5
Potri.001G340400 Populus trichocarpa HOM05D000615 ORTHO05D000447 5.2e-10 68.6 93 35.5
HanXRQChr14g0451081 Helianthus annuus HOM05D000615 ORTHO05D000447 6.9e-10 68.2 89 33.7
CSS0044042 Camellia sinensis var. sinensis HOM05D000615 ORTHO05D000447 9.0e-10 67.8 91 37.4
Potri.001G340200 Populus trichocarpa HOM05D000615 ORTHO05D000447 9.0e-10 67.8 93 35.5
QL03p030679 Quercus lobata HOM05D000615 ORTHO05D000447 9.0e-10 67.8 94 31.9
Dinv27420 Davidia involucrata HOM05D000615 ORTHO05D000447 1.2e-09 67.4 93 34.4
Glyma.20G204500 Glycine max HOM05D000615 ORTHO05D000447 1.2e-09 67.4 101 30.7
Cfa008387 Carpinus fangiana HOM05D000615 ORTHO05D000447 1.5e-09 67.0 97 37.1
Medtr1g075230 Medicago truncatula HOM05D000615 ORTHO05D000447 1.5e-09 67.0 98 31.6
QL03p031135 Quercus lobata HOM05D000615 ORTHO05D000447 1.5e-09 67.0 95 30.5
ClCG05G012900 Citrullus lanatus HOM05D000615 ORTHO05D000447 2.0e-09 66.6 90 36.7
CiPaw.04G031000 Carya illinoinensis HOM05D000615 ORTHO05D000447 2.6e-09 66.2 86 34.9
MELO3C014790.2 Cucumis melo HOM05D000615 ORTHO05D000447 2.6e-09 66.2 90 36.7
DCAR_011271 Daucus carota HOM05D000615 ORTHO05D000447 2.6e-09 66.2 89 38.2
DCAR_011272 Daucus carota HOM05D000615 ORTHO05D000447 2.6e-09 66.2 89 38.2
CsaV3_3G027580 Cucumis sativus L. HOM05D000615 ORTHO05D000447 3.4e-09 65.9 90 36.7
ECA238G1971 Erigeron canadensis HOM05D000615 ORTHO05D000447 3.4e-09 65.9 89 31.5
Lj5g0015603 Lotus japonicus HOM05D000615 ORTHO05D000447 3.4e-09 65.9 102 30.4
Potri.001G340500 Populus trichocarpa HOM05D000615 ORTHO05D000447 3.4e-09 65.9 93 35.5
Sabra16G0220400 Salix brachista HOM05D000615 ORTHO05D000447 3.4e-09 65.9 93 36.6
Sabra16G0221000 Salix brachista HOM05D000615 ORTHO05D000447 3.4e-09 65.9 93 36.6
CiPaw.04G030800 Carya illinoinensis HOM05D000615 ORTHO05D000447 5.8e-09 65.1 86 34.9
ECA232G1814 Erigeron canadensis HOM05D000615 ORTHO05D000447 5.8e-09 65.1 89 32.6
QL03p030631 Quercus lobata HOM05D000615 ORTHO05D000447 5.8e-09 65.1 114 27.2
Hma1.2p1_0279F.1_g111970 Hydrangea macrophylla HOM05D000615 ORTHO05D000447 7.6e-09 64.7 97 32.0
Manes.15G153400 Manihot esculenta HOM05D000615 ORTHO05D000447 9.9e-09 64.3 93 36.6
vmacro18301 Vaccinium macrocarpon HOM05D000615 ORTHO05D000447 9.9e-09 64.3 91 35.2
Actinidia05963 Actinidia chinensis HOM05D000615 ORTHO05D000447 1.3e-08 63.9 90 36.7
Actinidia07904 Actinidia chinensis HOM05D000615 ORTHO05D000447 1.3e-08 63.9 90 36.7
Eucgr.I01711 Eucalyptus grandis HOM05D000615 ORTHO05D000447 1.7e-08 63.5 90 31.1
QL06p015345 Quercus lobata HOM05D000615 ORTHO05D000447 2.2e-08 63.2 59 50.8
CiPaw.03G047300 Carya illinoinensis HOM05D000615 ORTHO05D000447 2.9e-08 62.8 90 34.4
Eucgr.I01714 Eucalyptus grandis HOM05D000615 ORTHO05D000447 3.8e-08 62.4 93 34.4
TPR.G28888 Trifolium pratense HOM05D000615 ORTHO05D000447 3.8e-08 62.4 95 31.6
Actinidia05965 Actinidia chinensis HOM05D000615 ORTHO05D000447 4.9e-08 62.0 93 33.3
Cfa004439 Carpinus fangiana HOM05D000615 ORTHO05D000447 4.9e-08 62.0 62 46.8
Lju41A44T84 Lonicera japonica HOM05D000615 ORTHO05D000447 4.9e-08 62.0 90 34.4
Psat0s1411g0080 Pisum sativum HOM05D000615 ORTHO05D000447 6.4e-08 61.6 95 31.6
Haze_14776 Corylus avellana HOM05D000615 ORTHO05D000447 8.4e-08 61.2 90 36.7
Sabra16G0220500 Salix brachista HOM05D000615 ORTHO05D000447 8.4e-08 61.2 90 31.1
Cfa004423 Carpinus fangiana HOM05D000615 ORTHO05D000447 1.1e-07 60.8 43 55.8
Cfa004435 Carpinus fangiana HOM05D000615 ORTHO05D000447 1.1e-07 60.8 56 46.4
Cfa007321 Carpinus fangiana HOM05D000615 ORTHO05D000447 1.1e-07 60.8 90 35.6
Rhsim08G0047900 Rhododendron simsii HOM05D000615 ORTHO05D000447 1.1e-07 60.8 91 33.0
vmacro18300 Vaccinium macrocarpon HOM05D000615 ORTHO05D000447 1.1e-07 60.8 91 34.1
Actinidia36138 Actinidia chinensis HOM05D000615 ORTHO05D000447 1.4e-07 60.5 89 33.7
Rhsim08G0047800 Rhododendron simsii HOM05D000615 ORTHO05D000447 1.4e-07 60.5 91 31.9
CiPaw.04G030900 Carya illinoinensis HOM05D000615 ORTHO05D000447 1.9e-07 60.1 87 33.3
QL03p031354 Quercus lobata HOM05D000615 ORTHO05D000447 1.9e-07 60.1 90 32.2
CsaV3_2G013160 Cucumis sativus L. HOM05D000615 ORTHO05D000447 2.4e-07 59.7 98 35.7
Eucgr.I01709 Eucalyptus grandis HOM05D000615 ORTHO05D000447 3.2e-07 59.3 93 30.1
QL03p030721 Quercus lobata HOM05D000615 ORTHO05D000447 3.2e-07 59.3 153 22.9
Hund06841 Selenicereus undatus HOM05D000615 ORTHO05D000447 3.2e-07 59.3 96 29.2
Ciclev10000431m.g Citrus clementina HOM05D000615 ORTHO05D000447 4.2e-07 58.9 93 31.2
GSVIVG01032357001 Vitis vinifera HOM05D000615 ORTHO05D000447 4.2e-07 58.9 90 30.0
Actinidia07903 Actinidia chinensis HOM05D000615 ORTHO05D000447 5.4e-07 58.5 90 34.4
CsaV3_2G013180 Cucumis sativus L. HOM05D000615 ORTHO05D000447 5.4e-07 58.5 98 35.7
TPR.G22483 Trifolium pratense HOM05D000615 ORTHO05D000447 7.1e-07 58.2 62 45.2
Eucgr.H00206 Eucalyptus grandis HOM05D000615 ORTHO05D000447 9.3e-07 57.8 91 31.9
Sed0002132 Sechium edule HOM05D000615 ORTHO05D000447 1.2e-06 57.4 101 33.7
Sed0009385 Sechium edule HOM05D000615 ORTHO05D000447 1.2e-06 57.4 101 33.7
Cfa008388 Carpinus fangiana HOM05D000615 ORTHO05D000447 1.6e-06 57.0 96 32.3
Haze_11282 Corylus avellana HOM05D000615 ORTHO05D000447 1.6e-06 57.0 95 30.5
VMungo0720G1689 Vigna mungo HOM05D000615 ORTHO05D000447 1.6e-06 57.0 56 48.2
ClCG06G006650 Citrullus lanatus HOM05D000615 ORTHO05D000447 2.1e-06 56.6 101 33.7
MELO3C026768.2 Cucumis melo HOM05D000615 ORTHO05D000447 2.7e-06 56.2 98 33.7
Eucgr.H00204 Eucalyptus grandis HOM05D000615 ORTHO05D000447 2.7e-06 56.2 91 31.9
Phvul.007G280500 Phaseolus vulgaris HOM05D000615 ORTHO05D000447 2.7e-06 56.2 43 55.8
TPR.G28898 Trifolium pratense HOM05D000615 ORTHO05D000447 2.7e-06 56.2 62 41.9
Cfa004440 Carpinus fangiana HOM05D000615 ORTHO05D000447 3.5e-06 55.8 62 43.5
ClCG06G006670 Citrullus lanatus HOM05D000615 ORTHO05D000447 3.5e-06 55.8 98 33.7
Lalb_Chr01g0020791 Lupinus albus HOM05D000615 ORTHO05D000447 3.5e-06 55.8 57 47.4
PGR142G2690 Punica granatum HOM05D000615 ORTHO05D000447 3.5e-06 55.8 91 30.8
QL05p006982 Quercus lobata HOM05D000615 ORTHO05D000447 3.5e-06 55.8 183 24.6
TAR629G2170 Trochodendron aralioides HOM05D000615 ORTHO05D000447 3.5e-06 55.8 114 27.2
CiPaw.04G150900 Carya illinoinensis HOM05D000615 ORTHO05D000447 4.6e-06 55.5 54 46.3
Medtr1g040360 Medicago truncatula HOM05D000615 ORTHO05D000447 4.6e-06 55.5 62 41.9
RcHm_v2.0_Chr4g0389881 Rosa chinensis HOM05D000615 ORTHO05D000447 4.6e-06 55.5 62 41.9
Hund06839 Selenicereus undatus HOM05D000615 ORTHO05D000447 6.0e-06 55.1 85 32.9
arahy.Tifrunner.gnm1.ann1.9T88Y8 Arachis hypogaea HOM05D000615 ORTHO05D000447 7.8e-06 54.7 57 45.6
arahy.Tifrunner.gnm1.ann1.NM4QXF Arachis hypogaea HOM05D000615 ORTHO05D000447 7.8e-06 54.7 57 45.6
Glyma.02G000700 Glycine max HOM05D000615 ORTHO05D000447 7.8e-06 54.7 43 53.5
Glyma.10G000500 Glycine max HOM05D000615 ORTHO05D000447 7.8e-06 54.7 43 53.5


User provided reference genes

Program Settings