Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p015216 Quercus lobata HOM05D005721 ORTHO05D006758 3.7e-111 404.8 196 100.0
QL05p015579 Quercus lobata HOM05D005721 ORTHO05D006758 4.9e-63 245.0 160 79.4
QL05p015721 Quercus lobata HOM05D005721 ORTHO05D006758 6.4e-63 244.6 160 79.4
Haze_15914 Corylus avellana HOM05D005721 ORTHO05D006758 1.7e-52 209.9 160 66.9
CiPaw.01G227700 Carya illinoinensis HOM05D005721 ORTHO05D006758 6.6e-52 208.0 160 65.6
CANSAT56G2950 Cannabis sativa HOM05D005721 ORTHO05D006758 6.4e-47 191.4 160 59.4
Hma1.2p1_0388F.1_g142110 Hydrangea macrophylla HOM05D005721 ORTHO05D006758 1.9e-46 189.9 160 59.4
Hma1.2p1_0388F.1_g142120 Hydrangea macrophylla HOM05D005721 ORTHO05D006758 1.9e-46 189.9 160 59.4
CSS0018154 Camellia sinensis var. sinensis HOM05D005721 ORTHO05D006758 4.2e-46 188.7 160 60.0
Dinv37937 Davidia involucrata HOM05D005721 ORTHO05D006758 9.3e-46 187.6 160 61.9
RcHm_v2.0_Chr2g0142311 Rosa chinensis HOM05D005721 ORTHO05D006758 1.3e-44 183.7 160 58.8
TAR383G0756 Trochodendron aralioides HOM05D005721 ORTHO05D006758 5.1e-44 181.8 160 59.4
vmacro18826 Vaccinium macrocarpon HOM05D005721 ORTHO05D006758 8.7e-44 181.0 160 59.4
GSVIVG01016897001 Vitis vinifera HOM05D005721 ORTHO05D006758 8.7e-44 181.0 160 56.9
FAN05G3306 Fragaria x ananassa HOM05D005721 ORTHO05D006758 1.1e-43 180.6 160 57.5
FvH4_6g32880 Fragaria vesca HOM05D005721 ORTHO05D006758 1.5e-43 180.3 160 58.1
FAN02G2457 Fragaria x ananassa HOM05D005721 ORTHO05D006758 1.9e-43 179.9 160 57.5
Ciclev10025098m.g Citrus clementina HOM05D005721 ORTHO05D006758 9.6e-43 177.6 160 56.2
Actinidia21738 Actinidia chinensis HOM05D005721 ORTHO05D006758 1.3e-42 177.2 162 58.6
Dinv30404 Davidia involucrata HOM05D005721 ORTHO05D006758 1.3e-42 177.2 160 55.6
Lj9A516G96 Lonicera japonica HOM05D005721 ORTHO05D006758 1.6e-42 176.8 185 51.4
Rhsim08G0230700 Rhododendron simsii HOM05D005721 ORTHO05D006758 1.6e-42 176.8 160 57.5
Duzib192G0301 Durio zibethinus HOM05D005721 ORTHO05D006758 2.1e-42 176.4 171 53.8
Duzib235G0012 Durio zibethinus HOM05D005721 ORTHO05D006758 4.8e-42 175.3 171 53.2
Prupe.3G053200 Prunus persica HOM05D005721 ORTHO05D006758 4.8e-42 175.3 171 55.0
Thecc.06G106800 Theobroma cacao HOM05D005721 ORTHO05D006758 1.1e-41 174.1 155 58.7
Manes.11G029200 Manihot esculenta HOM05D005721 ORTHO05D006758 1.8e-41 173.3 160 56.2
MD17G1178100 Malus domestica HOM05D005721 ORTHO05D006758 2.4e-41 172.9 171 55.0
Atru.chr1.3621 Acer truncatum HOM05D005721 ORTHO05D006758 5.3e-41 171.8 160 55.6
Gohir.A10G062400 Gossypium hirsutum HOM05D005721 ORTHO05D006758 3.4e-40 169.1 171 51.5
Gohir.D10G064100 Gossypium hirsutum HOM05D005721 ORTHO05D006758 3.4e-40 169.1 171 51.5
Gorai.011G068100 Gossypium raimondii HOM05D005721 ORTHO05D006758 3.4e-40 169.1 171 51.5
MD09G1196700 Malus domestica HOM05D005721 ORTHO05D006758 9.9e-40 167.5 160 56.9
ECA232G2751 Erigeron canadensis HOM05D005721 ORTHO05D006758 1.3e-39 167.2 171 50.3
Ca_23291_v3 Cicer arietinum L. HOM05D005721 ORTHO05D006758 1.7e-39 166.8 160 55.6
Eucgr.F03100 Eucalyptus grandis HOM05D005721 ORTHO05D006758 1.7e-39 166.8 164 55.5
PGR102G0208 Punica granatum HOM05D005721 ORTHO05D006758 1.7e-39 166.8 164 55.5
Aqoxy7G03983 Aquilegia oxysepala HOM05D005721 ORTHO05D006758 6.4e-39 164.9 160 51.9
Lsat_1_v5_gn_4_96061 Lactuca sativa HOM05D005721 ORTHO05D006758 8.4e-39 164.5 171 50.9
Psat4g194600 Pisum sativum HOM05D005721 ORTHO05D006758 8.4e-39 164.5 160 55.0
Peaxi162Scf00038g01247 Petunia axillaris HOM05D005721 ORTHO05D006758 1.1e-38 164.1 171 50.3
Cpa.g.sc131.22 Carica papaya HOM05D005721 ORTHO05D006758 1.4e-38 163.7 160 54.4
ClCG09G000510 Citrullus lanatus HOM05D005721 ORTHO05D006758 5.4e-38 161.8 172 51.2
Nitab4.5_0006071g0030 Nicotiana tabacum HOM05D005721 ORTHO05D006758 5.4e-38 161.8 174 48.9
Medtr8g015550 Medicago truncatula HOM05D005721 ORTHO05D006758 7.1e-38 161.4 160 53.8
Sc12g0009950 Simmondsia chinensis HOM05D005721 ORTHO05D006758 7.1e-38 161.4 160 52.5
Nn6g35400 Nelumbo nucifera HOM05D005721 ORTHO05D006758 9.3e-38 161.0 160 53.8
Glyma.08G196700 Glycine max HOM05D005721 ORTHO05D006758 1.6e-37 160.2 160 52.5
Nitab4.5_0004848g0040 Nicotiana tabacum HOM05D005721 ORTHO05D006758 1.6e-37 160.2 174 48.3
Glyma.07G013000 Glycine max HOM05D005721 ORTHO05D006758 3.5e-37 159.1 160 52.5
Lj3g0007444 Lotus japonicus HOM05D005721 ORTHO05D006758 3.5e-37 159.1 160 53.1
Hund07658 Selenicereus undatus HOM05D005721 ORTHO05D006758 7.9e-37 157.9 160 52.5
THA.LOC104813944 Tarenaya hassleriana HOM05D005721 ORTHO05D006758 1.3e-36 157.1 187 46.5
Lalb_Chr01g0013341 Lupinus albus HOM05D005721 ORTHO05D006758 3.9e-36 155.6 160 52.5
PSO210G3246 Papaver somniferum HOM05D005721 ORTHO05D006758 5.1e-36 155.2 166 53.0
MELO3C024406.2 Cucumis melo HOM05D005721 ORTHO05D006758 8.7e-36 154.5 173 50.3
PSO210G5250 Papaver somniferum HOM05D005721 ORTHO05D006758 8.7e-36 154.5 166 53.0
EL10Ac9g21136 Beta vulgaris HOM05D005721 ORTHO05D006758 1.9e-35 153.3 160 52.5
TPR.G8754 Trifolium pratense HOM05D005721 ORTHO05D006758 5.6e-35 151.8 160 51.9
CAN.G1668.6 Capsicum annuum HOM05D005721 ORTHO05D006758 1.6e-34 150.2 174 47.1
Nn8g38942 Nelumbo nucifera HOM05D005721 ORTHO05D006758 1.6e-34 150.2 171 48.0
A07p39040 Brassica napus HOM05D005721 ORTHO05D006758 3.7e-34 149.1 160 48.1
C06p47250 Brassica napus HOM05D005721 ORTHO05D006758 3.7e-34 149.1 160 48.1
BolC6t39764H Brassica oleracea HOM05D005721 ORTHO05D006758 3.7e-34 149.1 160 48.1
BraA07t31454Z Brassica rapa HOM05D005721 ORTHO05D006758 3.7e-34 149.1 160 48.1
Oeu026535.1 Olea europaea HOM05D005721 ORTHO05D006758 3.7e-34 149.1 160 51.9
Sopen03g040160 Solanum pennellii HOM05D005721 ORTHO05D006758 3.7e-34 149.1 174 47.7
AUR62038341 Chenopodium quinoa HOM05D005721 ORTHO05D006758 4.8e-34 148.7 167 49.7
Solyc03g121350.3 Solanum lycopersicum HOM05D005721 ORTHO05D006758 4.8e-34 148.7 174 47.7
Ah.01g004440 Amaranthus hybridus HOM05D005721 ORTHO05D006758 6.2e-34 148.3 160 50.6
Carub.0002s1978 Capsella rubella HOM05D005721 ORTHO05D006758 1.1e-33 147.5 160 48.1
CsaV3_7G034930 Cucumis sativus L. HOM05D005721 ORTHO05D006758 1.1e-33 147.5 171 49.1
Sp5g27980 Schrenkiella parvula HOM05D005721 ORTHO05D006758 1.1e-33 147.5 160 48.8
AL2G32770 Arabidopsis lyrata HOM05D005721 ORTHO05D006758 1.4e-33 147.1 187 42.8
Oeu001923.1 Olea europaea HOM05D005721 ORTHO05D006758 2.4e-33 146.4 160 51.2
AT1G73020 Arabidopsis thaliana HOM05D005721 ORTHO05D006758 3.1e-33 146.0 160 46.9
Thhalv10018233m.g Eutrema salsugineum HOM05D005721 ORTHO05D006758 3.1e-33 146.0 160 47.5
Sed0006169 Sechium edule HOM05D005721 ORTHO05D006758 4.0e-33 145.6 173 46.8
Phvul.010G142500 Phaseolus vulgaris HOM05D005721 ORTHO05D006758 5.3e-33 145.2 160 49.4
CARHR065990 Cardamine hirsuta HOM05D005721 ORTHO05D006758 1.2e-32 144.1 160 45.6
SGA_v2.0_scaffold71G23752 Striga asiatica HOM05D005721 ORTHO05D006758 1.2e-32 144.1 171 48.0
Aa31LG4G3310 Aethionema arabicum HOM05D005721 ORTHO05D006758 1.5e-32 143.7 160 48.8
VMungo0331G1465 Vigna mungo HOM05D005721 ORTHO05D006758 5.8e-32 141.7 160 48.8
AUR62023905 Chenopodium quinoa HOM05D005721 ORTHO05D006758 7.6e-32 141.4 160 48.1
Migut.I00999 Erythranthe guttata HOM05D005721 ORTHO05D006758 2.9e-31 139.4 172 46.5
A07p30000 Brassica napus HOM05D005721 ORTHO05D006758 3.8e-31 139.0 160 46.9
Cc04_g02230 Coffea canephora HOM05D005721 ORTHO05D006758 6.4e-31 138.3 160 45.6
BcaC08g45678 Brassica carinata HOM05D005721 ORTHO05D006758 1.4e-30 137.1 160 46.2
C06p34410 Brassica napus HOM05D005721 ORTHO05D006758 1.4e-30 137.1 160 46.2
BolC6t38551H Brassica oleracea HOM05D005721 ORTHO05D006758 1.4e-30 137.1 160 46.2
BraA07t30638Z Brassica rapa HOM05D005721 ORTHO05D006758 1.4e-30 137.1 160 46.2
MBI01_g16575_MAGBIO Magnolia biondii HOM05D005721 ORTHO05D006758 2.5e-30 136.3 162 50.0
arahy.Tifrunner.gnm1.ann1.NQY1Y2 Arachis hypogaea HOM05D005721 ORTHO05D006758 4.2e-30 135.6 162 44.4
arahy.Tifrunner.gnm1.ann1.HT12QJ Arachis hypogaea HOM05D005721 ORTHO05D006758 7.1e-30 134.8 162 44.4
arahy.Tifrunner.gnm1.ann1.NL3M0M Arachis hypogaea HOM05D005721 ORTHO05D006758 1.8e-28 130.2 162 43.2
DCAR_031423 Daucus carota HOM05D005721 ORTHO05D006758 3.9e-28 129.0 171 46.2
unitig_26.g8931 Utricularia gibba HOM05D005721 ORTHO05D006758 1.3e-26 124.0 139 49.6
Zm00001eb155350 Zea mays HOM05D005721 ORTHO05D006758 1.1e-25 120.9 160 45.6
Os01g0706700 Oryza sativa ssp. japonica HOM05D005721 ORTHO05D006758 6.9e-25 118.2 164 45.1
ATR0789G086 Amborella trichopoda HOM05D005721 ORTHO05D006758 7.6e-24 114.8 166 42.8
arahy.Tifrunner.gnm1.ann1.P3QXG2 Arachis hypogaea HOM05D005721 ORTHO05D006758 7.6e-24 114.8 120 50.0
Zm00001eb361150 Zea mays HOM05D005721 ORTHO05D006758 1.3e-23 114.0 122 51.6
HanXRQChr05g0162621 Helianthus annuus HOM05D005721 ORTHO05D006758 2.9e-23 112.8 110 56.4
Gohir.A06G146950 Gossypium hirsutum HOM05D005721 ORTHO05D006758 1.2e-21 107.5 95 51.6
HanXRQChr04g0123091 Helianthus annuus HOM05D005721 ORTHO05D006758 5.1e-20 102.1 105 53.3
Gorai.010G178600 Gossypium raimondii HOM05D005721 ORTHO05D006758 8.7e-20 101.3 90 56.7
Actinidia32127 Actinidia chinensis HOM05D005721 ORTHO05D006758 1.0e-15 87.8 95 53.7
SMO147G0374 Selaginella moellendorffii HOM05D005721 ORTHO05D006758 4.2e-14 82.4 121 38.8
AagrBONN_evm.TU.Sc2ySwM_344.674 Anthoceros agrestis HOM05D005721 ORTHO05D006758 2.1e-13 80.1 121 39.7
Gohir.D06G152751 Gossypium hirsutum HOM05D005721 ORTHO05D006758 5.7e-11 72.0 89 43.8
VMungo0251G0043 Vigna mungo HOM05D005721 ORTHO05D006758 1.3e-10 70.9 74 45.9
Mapoly0004s0214 Marchantia polymorpha HOM05D005721 ORTHO05D006758 3.7e-10 69.3 121 33.1
Pp3c7_22640 Physcomitrium patens HOM05D005721 ORTHO05D006758 1.4e-09 67.4 173 26.0
SEGI_20658 Sequoiadendron giganteum HOM05D005721 ORTHO05D006758 9.4e-06 54.7 92 39.1


User provided reference genes

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