Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p012151 Quercus lobata HOM05D000264 ORTHO05D000152 5.2e-105 384.4 196 100.0
TWI36G0192 Tripterygium wilfordii HOM05D000264 ORTHO05D000152 1.7e-23 113.6 179 41.9
QL05p012353 Quercus lobata HOM05D000264 ORTHO05D000152 2.2e-23 113.2 176 43.8
arahy.Tifrunner.gnm1.ann1.SP93FZ Arachis hypogaea HOM05D000264 ORTHO05D000152 6.5e-23 111.7 164 42.7
Actinidia11042 Actinidia chinensis HOM05D000264 ORTHO05D000152 4.3e-19 99.0 146 40.4
Eucgr.K00987 Eucalyptus grandis HOM05D000264 ORTHO05D000152 4.3e-19 99.0 148 41.9
Glyma.12G111400 Glycine max HOM05D000264 ORTHO05D000152 5.7e-19 98.6 181 35.9
Eucgr.E03813 Eucalyptus grandis HOM05D000264 ORTHO05D000152 9.7e-19 97.8 148 42.6
Eucgr.K01004 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.3e-18 97.4 129 45.7
COL.COLO4_07388 Corchorus olitorius HOM05D000264 ORTHO05D000152 2.2e-18 96.7 148 40.5
Potri.019G101500 Populus trichocarpa HOM05D000264 ORTHO05D000152 1.1e-17 94.4 180 37.2
Eucgr.K01002 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.8e-17 93.6 117 45.3
GSVIVG01020530001 Vitis vinifera HOM05D000264 ORTHO05D000152 5.3e-17 92.0 142 38.0
Sabra19G0111300 Salix brachista HOM05D000264 ORTHO05D000152 9.0e-17 91.3 136 41.2
Eucgr.K00996 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.2e-16 90.9 129 40.3
Eucgr.K01000 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.2e-16 90.9 160 37.5
Actinidia11041 Actinidia chinensis HOM05D000264 ORTHO05D000152 2.6e-16 89.7 142 40.1
TWI75G0394 Tripterygium wilfordii HOM05D000264 ORTHO05D000152 3.4e-16 89.4 182 35.7
Glyma.06G294400 Glycine max HOM05D000264 ORTHO05D000152 4.5e-16 89.0 165 37.0
Sabra19G0111400 Salix brachista HOM05D000264 ORTHO05D000152 4.5e-16 89.0 136 41.2
VMungo1127G0862 Vigna mungo HOM05D000264 ORTHO05D000152 5.9e-16 88.6 131 40.5
Eucgr.K00989 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.0e-15 87.8 130 42.3
Cpa.g.sc34.146 Carica papaya HOM05D000264 ORTHO05D000152 1.7e-15 87.0 141 38.3
Eucgr.K01006 Eucalyptus grandis HOM05D000264 ORTHO05D000152 2.2e-15 86.7 132 41.7
GSVIVG01020517001 Vitis vinifera HOM05D000264 ORTHO05D000152 2.2e-15 86.7 155 35.5
Potri.018G078450 Populus trichocarpa HOM05D000264 ORTHO05D000152 3.8e-15 85.9 171 36.8
Potri.018G077633 Populus trichocarpa HOM05D000264 ORTHO05D000152 5.0e-15 85.5 182 34.6
Potri.018G078200 Populus trichocarpa HOM05D000264 ORTHO05D000152 5.0e-15 85.5 170 36.5
Dinv23656 Davidia involucrata HOM05D000264 ORTHO05D000152 8.5e-15 84.7 137 40.9
TWI36G0228 Tripterygium wilfordii HOM05D000264 ORTHO05D000152 1.9e-14 83.6 180 32.8
TWI36G1112 Tripterygium wilfordii HOM05D000264 ORTHO05D000152 2.5e-14 83.2 138 39.9
TWI36G0414 Tripterygium wilfordii HOM05D000264 ORTHO05D000152 3.2e-14 82.8 175 33.7
Potri.018G077766 Populus trichocarpa HOM05D000264 ORTHO05D000152 4.2e-14 82.4 170 35.9
Eucgr.K00998 Eucalyptus grandis HOM05D000264 ORTHO05D000152 5.5e-14 82.0 99 43.4
QL08p038433 Quercus lobata HOM05D000264 ORTHO05D000152 5.5e-14 82.0 112 42.0
Eucgr.K01007 Eucalyptus grandis HOM05D000264 ORTHO05D000152 7.2e-14 81.6 134 41.0
Potri.018G077250 Populus trichocarpa HOM05D000264 ORTHO05D000152 9.4e-14 81.3 181 32.6
Rhsim06G0144700 Rhododendron simsii HOM05D000264 ORTHO05D000152 1.6e-13 80.5 136 34.6
Rhsim06G0145400 Rhododendron simsii HOM05D000264 ORTHO05D000152 1.6e-13 80.5 136 34.6
Eucgr.I02674 Eucalyptus grandis HOM05D000264 ORTHO05D000152 2.1e-13 80.1 161 41.0
Eucgr.K00973 Eucalyptus grandis HOM05D000264 ORTHO05D000152 2.7e-13 79.7 134 41.8
Rhsim06G0145000 Rhododendron simsii HOM05D000264 ORTHO05D000152 3.6e-13 79.3 136 36.8
vmacro12289 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 4.6e-13 79.0 137 35.8
Eucgr.K00975 Eucalyptus grandis HOM05D000264 ORTHO05D000152 6.1e-13 78.6 180 33.3
Rhsim06G0144200 Rhododendron simsii HOM05D000264 ORTHO05D000152 6.1e-13 78.6 134 36.6
Glyma.06G293900 Glycine max HOM05D000264 ORTHO05D000152 7.9e-13 78.2 127 36.2
CSS0035240 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 1.4e-12 77.4 155 31.6
Glyma.06G294100 Glycine max HOM05D000264 ORTHO05D000152 1.4e-12 77.4 127 38.6
Potri.018G077500 Populus trichocarpa HOM05D000264 ORTHO05D000152 1.8e-12 77.0 165 33.9
Cc05_g07000 Coffea canephora HOM05D000264 ORTHO05D000152 5.1e-12 75.5 136 35.3
TWI36G0435 Tripterygium wilfordii HOM05D000264 ORTHO05D000152 5.1e-12 75.5 181 33.7
Eucgr.K00982 Eucalyptus grandis HOM05D000264 ORTHO05D000152 6.7e-12 75.1 135 36.3
COL.COLO4_30202 Corchorus olitorius HOM05D000264 ORTHO05D000152 8.8e-12 74.7 146 30.1
GSVIVG01030367001 Vitis vinifera HOM05D000264 ORTHO05D000152 8.8e-12 74.7 142 35.2
DCAR_013640 Daucus carota HOM05D000484 ORTHO05D000346 1.1e-11 74.3 163 33.7
TWI36G1297 Tripterygium wilfordii HOM05D000264 ORTHO05D000152 2.0e-11 73.6 158 29.1
Eucgr.K00986 Eucalyptus grandis HOM05D000264 ORTHO05D000152 2.5e-11 73.2 84 51.2
Rhsim06G0145100 Rhododendron simsii HOM05D000264 ORTHO05D000152 2.5e-11 73.2 136 33.8
Potri.019G101700 Populus trichocarpa HOM05D000264 ORTHO05D000152 3.3e-11 72.8 135 37.8
Rhsim06G0144500 Rhododendron simsii HOM05D000264 ORTHO05D000152 4.3e-11 72.4 136 33.8
vmacro22812 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 4.3e-11 72.4 137 35.8
Eucgr.E02497 Eucalyptus grandis HOM05D000264 ORTHO05D000152 7.4e-11 71.6 133 39.1
Rhsim06G0144300 Rhododendron simsii HOM05D000264 ORTHO05D000152 7.4e-11 71.6 136 33.1
Eucgr.K00687 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.3e-10 70.9 126 34.9
Eucgr.K00705 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.3e-10 70.9 173 31.8
Atru.chr2.960 Acer truncatum HOM05D000264 ORTHO05D000152 3.7e-10 69.3 84 42.9
vmacro12293 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 3.7e-10 69.3 137 34.3
Eucgr.E02498 Eucalyptus grandis HOM05D000264 ORTHO05D000152 4.8e-10 68.9 144 34.0
Eucgr.K00978 Eucalyptus grandis HOM05D000264 ORTHO05D000152 6.3e-10 68.6 192 34.9
Sc12g0002980 Simmondsia chinensis HOM05D000264 ORTHO05D000152 8.2e-10 68.2 143 34.3
Eucgr.K00673 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.1e-09 67.8 126 32.5
Eucgr.K00699 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.1e-09 67.8 118 38.1
vmacro12288 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 1.1e-09 67.8 137 32.8
Glyma.06G294300 Glycine max HOM05D000264 ORTHO05D000152 1.4e-09 67.4 173 32.9
Rhsim06G0144600 Rhododendron simsii HOM05D000264 ORTHO05D000152 1.4e-09 67.4 128 37.5
Eucgr.K00980 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.8e-09 67.0 129 38.0
Glyma.12G112400 Glycine max HOM05D000264 ORTHO05D000152 2.4e-09 66.6 95 40.0
Lj1C726T14 Lonicera japonica HOM05D000264 ORTHO05D000152 3.1e-09 66.2 149 33.6
Dinv01345 Davidia involucrata HOM05D000264 ORTHO05D000152 4.1e-09 65.9 110 37.3
Eucgr.K01014 Eucalyptus grandis HOM05D000264 ORTHO05D000152 4.1e-09 65.9 128 36.7
Oeu048152.1 Olea europaea HOM05D000264 ORTHO05D000152 4.1e-09 65.9 110 36.4
Prupe.3G155300 Prunus persica HOM05D000264 ORTHO05D000152 4.1e-09 65.9 149 32.9
GSVIVG01020527001 Vitis vinifera HOM05D000264 ORTHO05D000152 4.1e-09 65.9 95 35.8
DCAR_014775 Daucus carota HOM05D000264 ORTHO05D000152 6.9e-09 65.1 149 32.9
Prupe.3G155200 Prunus persica HOM05D000264 ORTHO05D000152 6.9e-09 65.1 149 32.2
Sabra19G0112700 Salix brachista HOM05D000264 ORTHO05D000152 6.9e-09 65.1 135 34.8
Hma1.2p1_0213F.1_g090330 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 9.1e-09 64.7 97 38.1
Lalb_Chr01g0005291 Lupinus albus HOM05D000264 ORTHO05D000152 9.1e-09 64.7 112 39.3
Rhsim06G0144100 Rhododendron simsii HOM05D000264 ORTHO05D000152 9.1e-09 64.7 138 31.9
Cpa.g.sc34.145 Carica papaya HOM05D000264 ORTHO05D000152 1.5e-08 63.9 138 27.5
Eucgr.K00701 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.5e-08 63.9 125 34.4
Sabra19G0111500 Salix brachista HOM05D000264 ORTHO05D000152 2.0e-08 63.5 135 34.1
Sabra13G0113700 Salix brachista HOM05D000264 ORTHO05D000152 2.6e-08 63.2 138 34.1
Migut.H01079 Erythranthe guttata HOM05D000264 ORTHO05D000152 3.4e-08 62.8 115 33.0
Prupe.3G154200 Prunus persica HOM05D000264 ORTHO05D000152 4.5e-08 62.4 137 32.1
Eucgr.H03472 Eucalyptus grandis HOM05D000264 ORTHO05D000152 5.9e-08 62.0 106 35.8
Eucgr.K00050 Eucalyptus grandis HOM05D000264 ORTHO05D000152 5.9e-08 62.0 129 32.6
Glyma.06G294200 Glycine max HOM05D000264 ORTHO05D000152 5.9e-08 62.0 104 29.8
Glyma.12G111500 Glycine max HOM05D000264 ORTHO05D000152 5.9e-08 62.0 110 39.1
Prupe.3G154700 Prunus persica HOM05D000264 ORTHO05D000152 5.9e-08 62.0 137 32.1
CANSAT78G1487 Cannabis sativa HOM05D000264 ORTHO05D000152 7.7e-08 61.6 96 35.4
Eucgr.K00471 Eucalyptus grandis HOM05D000264 ORTHO05D000152 7.7e-08 61.6 129 32.6
Sabra11G0081400 Salix brachista HOM05D000264 ORTHO05D000152 7.7e-08 61.6 141 31.9
Cc05_g06990 Coffea canephora HOM05D000264 ORTHO05D000152 1.0e-07 61.2 130 32.3
QL03p016541 Quercus lobata HOM05D000264 ORTHO05D000152 1.0e-07 61.2 98 37.8
Sc06g0005980 Simmondsia chinensis HOM05D000264 ORTHO05D000152 1.0e-07 61.2 133 35.3
Eucgr.K00693 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.3e-07 60.8 113 35.4
SalBow1G8685 Salvia bowleyana HOM05D000264 ORTHO05D000152 1.7e-07 60.5 111 34.2
Eucgr.K00468 Eucalyptus grandis HOM05D000264 ORTHO05D000152 2.2e-07 60.1 130 31.5
vmacro12290 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 2.2e-07 60.1 163 30.7
GSVIVG01020895001 Vitis vinifera HOM05D000264 ORTHO05D000152 2.2e-07 60.1 155 34.2
Eucgr.H03469 Eucalyptus grandis HOM05D000264 ORTHO05D000152 2.9e-07 59.7 106 36.8
Prupe.3G154000 Prunus persica HOM05D000264 ORTHO05D000152 2.9e-07 59.7 150 30.7
arahy.Tifrunner.gnm1.ann1.Z3XU5G Arachis hypogaea HOM05D000264 ORTHO05D000152 3.8e-07 59.3 93 36.6
Prupe.3G135200 Prunus persica HOM05D000264 ORTHO05D000152 3.8e-07 59.3 130 33.1
DCAR_024223 Daucus carota HOM05D000264 ORTHO05D000152 5.0e-07 58.9 116 36.2
Hma1.2p1_1193F.1_g265570 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 6.5e-07 58.5 149 30.9
Lj3A730T42 Lonicera japonica HOM05D000264 ORTHO05D000152 6.5e-07 58.5 132 28.0
Potri.013G134500 Populus trichocarpa HOM05D000264 ORTHO05D000152 6.5e-07 58.5 137 32.1
Lj3P792T9 Lonicera japonica HOM05D000264 ORTHO05D000152 8.5e-07 58.2 115 33.9
TAR624G0511 Trochodendron aralioides HOM05D000264 ORTHO05D000152 8.5e-07 58.2 110 34.5
vmacro12291 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 8.5e-07 58.2 163 29.4
arahy.Tifrunner.gnm1.ann1.CHR4W4 Arachis hypogaea HOM05D000264 ORTHO05D000152 1.1e-06 57.8 105 38.1
Lj3A793T36 Lonicera japonica HOM05D000264 ORTHO05D000152 1.1e-06 57.8 105 34.3
TAR636G3104 Trochodendron aralioides HOM05D000264 ORTHO05D000152 1.1e-06 57.8 135 31.9
Hma1.2p1_1193F.1_g265581 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 1.4e-06 57.4 135 31.9
Sc07g0003560 Simmondsia chinensis HOM05D000264 ORTHO05D000152 1.4e-06 57.4 179 33.5
Zm00001eb215410 Zea mays HOM05D000264 ORTHO05D000152 1.4e-06 57.4 150 35.3
Actinidia11043 Actinidia chinensis HOM05D000264 ORTHO05D000152 1.9e-06 57.0 124 31.5
Eucgr.H03471 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.9e-06 57.0 106 34.9
Eucgr.K00058 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.9e-06 57.0 132 33.3
Nn1g06590 Nelumbo nucifera HOM05D000264 ORTHO05D000152 1.9e-06 57.0 140 32.9
Rhsim06G0145300 Rhododendron simsii HOM05D000264 ORTHO05D000152 1.9e-06 57.0 148 27.0
Sc06g0006110 Simmondsia chinensis HOM05D000264 ORTHO05D000152 1.9e-06 57.0 99 40.4
FvH4_6g32123 Fragaria vesca HOM05D000454 ORTHO05D002637 2.5e-06 56.6 94 37.2
Atru.chr4.2238_Atru.chr4.2239 Acer truncatum HOM05D000264 ORTHO05D000152 3.2e-06 56.2 133 31.6
arahy.Tifrunner.gnm1.ann1.AMU9JT Arachis hypogaea HOM05D000264 ORTHO05D000152 3.2e-06 56.2 101 36.6
Eucgr.K00979 Eucalyptus grandis HOM05D000264 ORTHO05D000152 4.2e-06 55.8 94 35.1
EL10Ac6g14903 Beta vulgaris HOM05D000264 ORTHO05D000152 5.5e-06 55.5 126 29.4
TAR624G1302 Trochodendron aralioides HOM05D000264 ORTHO05D000152 5.5e-06 55.5 152 29.6
BcaC03g14743 Brassica carinata HOM05D000264 ORTHO05D000152 7.2e-06 55.1 109 36.7
Ciclev10004657m.g Citrus clementina HOM05D000264 ORTHO05D000152 7.2e-06 55.1 97 36.1
CARHR002990 Cardamine hirsuta HOM05D000264 ORTHO05D000152 9.4e-06 54.7 160 31.9
Ciclev10006968m.g Citrus clementina HOM05D000264 ORTHO05D000152 9.4e-06 54.7 142 33.1
Eucgr.K01008 Eucalyptus grandis HOM05D000264 ORTHO05D000152 9.4e-06 54.7 136 33.8
MD03G1094000 Malus domestica HOM05D000264 ORTHO05D000152 9.4e-06 54.7 92 39.1


User provided reference genes

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