Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p011510 Quercus lobata HOM05D000196 ORTHO05D337723 2.7e-163 578.6 285 100.0
QL05p010942 Quercus lobata HOM05D021912 ORTHO05D016378 1.4e-18 97.8 192 39.6
QL05p010889 Quercus lobata HOM05D023184 ORTHO05D016378 3.6e-14 83.2 195 35.9
Aa31LG10G6040 Aethionema arabicum HOM05D000196 ORTHO05D000279 7.5e-12 75.5 183 36.1
Dinv42736 Davidia involucrata HOM05D000196 ORTHO05D000279 2.4e-10 70.5 208 31.7
Dinv43365 Davidia involucrata HOM05D000196 ORTHO05D000279 2.4e-10 70.5 208 31.7
Sabra18G0081200 Salix brachista HOM05D000196 ORTHO05D000279 2.0e-09 67.4 220 27.3
Psat7g006800 Pisum sativum HOM05D000196 ORTHO05D000279 7.7e-09 65.5 287 26.8
TAR622G0963 Trochodendron aralioides HOM05D000196 ORTHO05D000279 1.3e-08 64.7 227 29.5
Thecc.01G307700 Theobroma cacao HOM05D000196 ORTHO05D000279 3.8e-08 63.2 215 27.9
Actinidia17322 Actinidia chinensis HOM05D000196 ORTHO05D000279 8.5e-08 62.0 212 28.8
Haze_22115 Corylus avellana HOM05D000196 ORTHO05D002323 8.5e-08 62.0 217 26.7
QL05p010764 Quercus lobata HOM05D021912 ORTHO05D016378 8.5e-08 62.0 177 31.1
SEGI_17815 Sequoiadendron giganteum HOM05D000196 ORTHO05D000279 8.5e-08 62.0 209 31.1
TAR383G0904 Trochodendron aralioides HOM05D000196 ORTHO05D000279 1.5e-07 61.2 222 28.8
TAR626G0497 Trochodendron aralioides HOM05D000196 ORTHO05D000279 1.9e-07 60.8 216 28.7
ATR0824G208 Amborella trichopoda HOM05D000196 ORTHO05D000279 2.5e-07 60.5 258 27.9
Hma1.2p1_1022F.1_g248770 Hydrangea macrophylla HOM05D000196 ORTHO05D000279 3.2e-07 60.1 242 27.7
Thecc.02G270100 Theobroma cacao HOM05D000196 ORTHO05D000279 3.2e-07 60.1 256 27.0
SEGI_08296 Sequoiadendron giganteum HOM05D000196 ORTHO05D000279 4.2e-07 59.7 209 31.1
Oeu012660.1 Olea europaea HOM05D000196 ORTHO05D000279 5.5e-07 59.3 264 28.4
SEGI_33069 Sequoiadendron giganteum HOM05D000196 ORTHO05D000279 7.2e-07 58.9 209 30.1
Ah.14g078170 Amaranthus hybridus HOM05D000196 ORTHO05D000279 9.4e-07 58.5 236 30.1
Oeu048863.2 Olea europaea HOM05D000196 ORTHO05D000279 1.2e-06 58.2 243 29.2
Medtr4g121020 Medicago truncatula HOM05D000196 ORTHO05D000279 1.6e-06 57.8 214 29.9
Pp3c8_21000 Physcomitrium patens HOM05D000196 ORTHO05D000279 1.6e-06 57.8 226 29.2
SMO197G0013 Selaginella moellendorffii HOM05D000196 ORTHO05D000279 1.6e-06 57.8 216 28.2
Gohir.A07G126800 Gossypium hirsutum HOM05D000196 ORTHO05D000279 2.1e-06 57.4 217 26.3
SMO118G0074 Selaginella moellendorffii HOM05D000196 ORTHO05D000279 2.1e-06 57.4 211 30.8
Medtr7g117705 Medicago truncatula HOM05D000196 ORTHO05D000279 2.7e-06 57.0 256 27.3
Nn2g12689 Nelumbo nucifera HOM05D000196 ORTHO05D000279 3.6e-06 56.6 224 29.0
Peaxi162Scf00102g00116 Petunia axillaris HOM05D000196 ORTHO05D000279 3.6e-06 56.6 216 29.6
QL05p010771 Quercus lobata HOM05D000196 ORTHO05D000279 3.6e-06 56.6 157 32.5
Rhsim04G0231700 Rhododendron simsii HOM05D000196 ORTHO05D000279 3.6e-06 56.6 242 28.9
PGSC0003DMG400023534 Solanum tuberosum HOM05D000196 ORTHO05D000279 3.6e-06 56.6 216 28.7
FAN17G0435 Fragaria x ananassa HOM05D000196 ORTHO05D000279 4.7e-06 56.2 230 26.5
Lalb_Chr23g0275751 Lupinus albus HOM05D000196 ORTHO05D000279 4.7e-06 56.2 204 27.9
Pp3c23_7400 Physcomitrium patens HOM05D000196 ORTHO05D000279 4.7e-06 56.2 257 27.6
TPR.G36946 Trifolium pratense HOM05D000196 ORTHO05D000279 4.7e-06 56.2 242 27.3
EL10Ac8g18844 Beta vulgaris HOM05D000196 ORTHO05D000279 6.1e-06 55.8 232 30.2
CiPaw.06G053100 Carya illinoinensis HOM05D000196 ORTHO05D000279 6.1e-06 55.8 219 26.9
AUR62016634 Chenopodium quinoa HOM05D000767 ORTHO05D000635 6.1e-06 55.8 172 30.8
Hma1.2p1_0013F.1_g009000 Hydrangea macrophylla HOM05D000196 ORTHO05D000279 6.1e-06 55.8 241 29.9
Lj1g0021103 Lotus japonicus HOM05D000196 ORTHO05D000279 6.1e-06 55.8 205 29.3
Lalb_Chr12g0201001 Lupinus albus HOM05D000196 ORTHO05D000279 6.1e-06 55.8 213 27.7
Nitab4.5_0002462g0050 Nicotiana tabacum HOM05D000767 ORTHO05D000635 6.1e-06 55.8 169 30.2
BcaB04g20872 Brassica carinata HOM05D000196 ORTHO05D000279 8.0e-06 55.5 244 28.3
Gohir.D09G236600 Gossypium hirsutum HOM05D000196 ORTHO05D000279 8.0e-06 55.5 319 26.3
Psat4g007520 Pisum sativum HOM05D000196 ORTHO05D000279 8.0e-06 55.5 225 29.8
SalBow1G6241 Salvia bowleyana HOM05D000196 ORTHO05D000279 8.0e-06 55.5 214 28.5
Solyc05g054390.4 Solanum lycopersicum HOM05D000196 ORTHO05D000279 8.0e-06 55.5 216 29.2
TWI36G1368 Tripterygium wilfordii HOM05D000196 ORTHO05D000279 8.0e-06 55.5 255 26.3


User provided reference genes

Program Settings