Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p011272 Quercus lobata HOM05D007444 ORTHO05D009359 9.3e-149 530.4 271 100.0
QL05p011652 Quercus lobata HOM05D007444 ORTHO05D009359 3.9e-131 471.9 272 90.4
QL05p010974 Quercus lobata HOM05D007444 ORTHO05D009359 1.8e-107 393.3 271 79.0
CiPaw.02G139200 Carya illinoinensis HOM05D007444 ORTHO05D009359 6.4e-81 305.1 269 62.5
Haze_15975 Corylus avellana HOM05D007444 ORTHO05D009359 8.0e-76 288.1 274 63.5
FvH4_6g33680 Fragaria vesca HOM05D007444 ORTHO05D009359 9.2e-72 274.6 271 56.8
FAN14G4700 Fragaria x ananassa HOM05D007444 ORTHO05D009359 1.2e-71 274.2 271 56.8
FAN09G3948 Fragaria x ananassa HOM05D007444 ORTHO05D009359 3.3e-69 266.2 271 55.0
Cfa003571 Carpinus fangiana HOM05D007444 ORTHO05D009359 5.6e-69 265.4 272 58.8
RcHm_v2.0_Chr2g0143591 Rosa chinensis HOM05D007444 ORTHO05D009359 1.2e-68 264.2 271 55.0
MD09G1191700 Malus domestica HOM05D007444 ORTHO05D009359 1.7e-65 253.8 271 50.6
Prupe.3G047900 Prunus persica HOM05D007444 ORTHO05D009359 3.0e-62 243.0 282 52.1
Actinidia09035 Actinidia chinensis HOM05D007444 ORTHO05D009359 2.4e-59 233.4 280 48.6
CSS0030092 Camellia sinensis var. sinensis HOM05D007444 ORTHO05D009359 1.5e-58 230.7 276 49.6
Lj9A520T86 Lonicera japonica HOM05D007444 ORTHO05D009359 1.9e-56 223.8 274 46.7
vmacro17027 Vaccinium macrocarpon HOM05D007444 ORTHO05D009359 3.2e-56 223.0 279 47.7
Duzib235G0092 Durio zibethinus HOM05D007444 ORTHO05D009359 5.4e-56 222.2 280 48.9
Manes.11G025100 Manihot esculenta HOM05D007444 ORTHO05D009359 1.3e-54 217.6 278 47.5
Medtr2g099820 Medicago truncatula HOM05D007444 ORTHO05D009359 1.1e-53 214.5 261 46.0
TAR383G0129 Trochodendron aralioides HOM05D007444 ORTHO05D009359 9.6e-53 211.5 301 43.9
Eucgr.F03140 Eucalyptus grandis HOM05D007444 ORTHO05D009359 1.6e-52 210.7 272 44.5
Ciclev10026127m.g Citrus clementina HOM05D007444 ORTHO05D009359 2.1e-52 210.3 274 46.7
Potri.001G196700 Populus trichocarpa HOM05D007444 ORTHO05D009359 8.1e-52 208.4 266 47.7
Sed0011511 Sechium edule HOM05D007444 ORTHO05D009359 1.8e-51 207.2 268 43.7
Phvul.005G158200 Phaseolus vulgaris HOM05D007444 ORTHO05D009359 6.9e-51 205.3 265 45.3
TPR.G6573 Trifolium pratense HOM05D007444 ORTHO05D009359 6.9e-51 205.3 258 43.0
GSVIVG01016873001 Vitis vinifera HOM05D007444 ORTHO05D009359 6.9e-51 205.3 264 45.8
Nitab4.5_0005918g0020 Nicotiana tabacum HOM05D007444 ORTHO05D009359 9.0e-51 204.9 276 46.7
Ca_01210_v3 Cicer arietinum L. HOM05D007444 ORTHO05D009359 3.4e-50 203.0 271 43.9
Lalb_Chr14g0372751 Lupinus albus HOM05D007444 ORTHO05D009359 4.9e-49 199.1 277 43.7
Glyma.15G024900 Glycine max HOM05D007444 ORTHO05D009359 8.4e-49 198.4 267 45.7
Cc04_g01830 Coffea canephora HOM05D007444 ORTHO05D009359 2.4e-48 196.8 269 44.2
Hund20831 Selenicereus undatus HOM05D007444 ORTHO05D009359 2.4e-48 196.8 282 42.6
TWI36G0277 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 3.2e-48 196.4 259 47.1
TWI36G1725 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 3.2e-48 196.4 259 47.1
Nitab4.5_0000255g0240 Nicotiana tabacum HOM05D007444 ORTHO05D009359 7.1e-48 195.3 263 44.1
Gohir.A06G190400 Gossypium hirsutum HOM05D007444 ORTHO05D009359 1.6e-47 194.1 280 46.8
Aqoxy7G01186 Aquilegia oxysepala HOM05D007444 ORTHO05D009359 6.0e-47 192.2 285 40.7
Carub.0003s1330 Capsella rubella HOM05D007444 ORTHO05D009359 1.7e-46 190.7 248 48.0
Gohir.D06G198800 Gossypium hirsutum HOM05D007444 ORTHO05D009359 2.3e-46 190.3 256 48.4
Lsat_1_v5_gn_1_35640 Lactuca sativa HOM05D007444 ORTHO05D009359 5.1e-46 189.1 264 42.4
Sc12g0010310 Simmondsia chinensis HOM05D007444 ORTHO05D009359 1.1e-45 188.0 255 44.3
PSO017G2704 Papaver somniferum HOM05D007444 ORTHO05D009359 1.5e-45 187.6 286 43.4
Gorai.010G231700 Gossypium raimondii HOM05D007444 ORTHO05D009359 1.9e-45 187.2 256 47.3
Psat5g292040 Pisum sativum HOM05D007444 ORTHO05D009359 3.3e-45 186.4 260 41.9
CsaV3_3G043760 Cucumis sativus L. HOM05D007444 ORTHO05D009359 4.8e-44 182.6 266 42.5
PSO478G1587 Papaver somniferum HOM05D007444 ORTHO05D009359 6.2e-44 182.2 289 42.2
MSTRG.4771 Avicennia marina HOM05D007444 ORTHO05D009359 1.4e-43 181.0 272 41.2
CANSAT56G0761 Cannabis sativa HOM05D007444 ORTHO05D009359 1.4e-43 181.0 271 45.4
COL.COLO4_30661 Corchorus olitorius HOM05D007444 ORTHO05D009359 1.4e-43 181.0 196 49.5
PGR119G0376 Punica granatum HOM05D007444 ORTHO05D009359 2.4e-43 180.3 277 44.0
THA.LOC104815643 Tarenaya hassleriana HOM05D007444 ORTHO05D009359 2.4e-43 180.3 279 39.4
AL3G25850 Arabidopsis lyrata HOM05D007444 ORTHO05D009359 4.0e-43 179.5 270 44.4
Lj3g0023369 Lotus japonicus HOM05D007444 ORTHO05D009359 1.5e-42 177.6 273 41.8
Sabra01G0143200 Salix brachista HOM05D007444 ORTHO05D009359 3.4e-42 176.4 229 44.5
Sopen06g022180 Solanum pennellii HOM05D007444 ORTHO05D009359 3.4e-42 176.4 272 43.4
Ah.08g216430 Amaranthus hybridus HOM05D007444 ORTHO05D009359 7.6e-42 175.3 277 41.5
PGSC0003DMG400004847 Solanum tuberosum HOM05D007444 ORTHO05D009359 1.3e-41 174.5 272 43.8
CAN.G825.32 Capsicum annuum HOM05D007444 ORTHO05D009359 1.7e-41 174.1 276 41.7
SGA_v2.0_scaffold68G22914 Striga asiatica HOM05D007444 ORTHO05D009359 2.2e-41 173.7 265 40.8
Oeu039953.1 Olea europaea HOM05D007444 ORTHO05D009359 2.9e-41 173.3 274 40.9
AT3G13780 Arabidopsis thaliana HOM05D007444 ORTHO05D009359 3.8e-41 172.9 248 45.2
DCAR_022704 Daucus carota HOM05D007444 ORTHO05D009359 6.4e-41 172.2 276 40.9
Sp3g11980 Schrenkiella parvula HOM05D007444 ORTHO05D009359 1.1e-40 171.4 272 44.1
AUR62009843 Chenopodium quinoa HOM05D007444 ORTHO05D009359 1.9e-40 170.6 276 40.2
Migut.D00964 Erythranthe guttata HOM05D007444 ORTHO05D009359 9.3e-40 168.3 262 39.7
BcaB06g25436 Brassica carinata HOM05D007444 ORTHO05D009359 1.2e-39 167.9 252 40.5
Aa31LG8G960 Aethionema arabicum HOM05D007444 ORTHO05D009359 1.6e-39 167.5 241 42.3
ClCG07G013830 Citrullus lanatus HOM05D007444 ORTHO05D009359 2.1e-39 167.2 279 35.8
BraA05t22371Z Brassica rapa HOM05D007444 ORTHO05D009359 2.7e-39 166.8 256 42.6
C05p54050 Brassica napus HOM05D007444 ORTHO05D009359 3.5e-39 166.4 263 41.8
BolC5t34070H Brassica oleracea HOM05D007444 ORTHO05D009359 3.5e-39 166.4 263 41.8
Thhalv10021210m.g Eutrema salsugineum HOM05D007444 ORTHO05D009359 6.0e-39 165.6 272 43.0
MELO3C013088.2 Cucumis melo HOM05D007444 ORTHO05D009359 7.9e-39 165.2 265 41.5
MBI01_g20340_MAGBIO Magnolia biondii HOM05D007444 ORTHO05D009359 7.9e-39 165.2 321 36.8
CARHR088510 Cardamine hirsuta HOM05D007444 ORTHO05D009359 1.3e-38 164.5 250 42.8
Peaxi162Scf00207g00133 Petunia axillaris HOM05D007444 ORTHO05D009359 5.1e-38 162.5 198 44.4
EL10Ac7g16359 Beta vulgaris HOM05D007444 ORTHO05D009359 8.7e-38 161.8 273 38.8
A05p35640 Brassica napus HOM05D007444 ORTHO05D009359 4.3e-37 159.5 192 44.3
SalBow7G2527 Salvia bowleyana HOM05D007444 ORTHO05D009359 7.4e-37 158.7 242 42.1
HanXRQChr02g0031731 Helianthus annuus HOM05D007444 ORTHO05D009359 2.1e-36 157.1 254 41.7
QL05p011362 Quercus lobata HOM05D007444 ORTHO05D009359 2.1e-31 140.6 104 79.8
arahy.Tifrunner.gnm1.ann1.F397YD Arachis hypogaea HOM05D007444 ORTHO05D009359 3.5e-31 139.8 282 40.4
AUR62038156 Chenopodium quinoa HOM05D007444 ORTHO05D009359 4.6e-31 139.4 192 41.7
arahy.Tifrunner.gnm1.ann1.ZV36U3 Arachis hypogaea HOM05D007444 ORTHO05D009359 1.0e-30 138.3 282 40.4
CDE05G3416 Ceratophyllum demersum HOM05D007444 ORTHO05D009359 2.3e-30 137.1 293 34.8
Zm00001eb277400 Zea mays HOM05D007444 ORTHO05D009359 1.1e-29 134.8 288 37.8
Dinv37906 Davidia involucrata HOM05D007444 ORTHO05D009359 3.8e-25 119.8 164 45.1
HPP92_005228 Vanilla planifolia HOM05D007444 ORTHO05D009359 1.9e-24 117.5 292 33.2
Rhsim12G0206600 Rhododendron simsii HOM05D007444 ORTHO05D009359 1.8e-22 110.9 159 45.3
Cpa.g.sc25.50 Carica papaya HOM05D007444 ORTHO05D009359 2.3e-22 110.5 189 38.6
Solyc06g062700.3 Solanum lycopersicum HOM05D007444 ORTHO05D009359 3.3e-21 106.7 159 42.1
ECA247G2926 Erigeron canadensis HOM05D000045 ORTHO05D000067 8.2e-20 102.1 162 42.6
Hma1.2p1_0496F.1_g165930 Hydrangea macrophylla HOM05D007444 ORTHO05D009359 1.5e-18 97.8 106 48.1
SEGI_13370 Sequoiadendron giganteum HOM05D007444 ORTHO05D009359 6.5e-17 92.4 270 30.4
QL05p010901 Quercus lobata HOM05D007444 ORTHO05D009359 1.4e-16 91.3 72 81.9
Os06g0565300 Oryza sativa ssp. japonica HOM05D007444 ORTHO05D009359 2.7e-07 60.5 79 38.0


User provided reference genes

Program Settings