Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p011148 Quercus lobata HOM05D006244 ORTHO05D007401 8.4e-171 603.6 305 100.0
QL10p050150 Quercus lobata HOM05D006244 ORTHO05D007401 3.9e-168 594.7 305 98.0
Cfa020094 Carpinus fangiana HOM05D006244 ORTHO05D007401 8.5e-139 497.3 305 83.0
CiPaw.02G053900 Carya illinoinensis HOM05D006244 ORTHO05D007401 1.7e-131 473.0 305 77.7
TAR636G2962 Trochodendron aralioides HOM05D006244 ORTHO05D007401 6.1e-121 438.0 305 70.2
FAN07G2433 Fragaria x ananassa HOM05D006244 ORTHO05D007401 6.3e-118 427.9 304 70.7
RcHm_v2.0_Chr4g0406631 Rosa chinensis HOM05D006244 ORTHO05D007401 1.4e-117 426.8 304 70.7
Gorai.011G141500 Gossypium raimondii HOM05D006244 ORTHO05D007401 1.8e-117 426.4 305 71.5
Gohir.D10G128300 Gossypium hirsutum HOM05D006244 ORTHO05D007401 9.2e-117 424.1 305 71.1
Dinv22748 Davidia involucrata HOM05D006244 ORTHO05D007401 2.0e-116 422.9 294 72.1
Actinidia11297 Actinidia chinensis HOM05D006244 ORTHO05D007401 3.5e-116 422.2 298 70.1
Manes.04G043800 Manihot esculenta HOM05D006244 ORTHO05D007401 4.5e-116 421.8 306 68.0
Prupe.1G196900 Prunus persica HOM05D006244 ORTHO05D007401 4.5e-116 421.8 304 70.7
Duzib175G0007 Durio zibethinus HOM05D006244 ORTHO05D007401 5.9e-116 421.4 305 70.2
CANSAT78G1025 Cannabis sativa HOM05D006244 ORTHO05D007401 7.7e-116 421.0 304 66.8
CSS0032343 Camellia sinensis var. sinensis HOM05D006244 ORTHO05D007401 2.3e-115 419.5 305 69.5
Duzib151G0743 Durio zibethinus HOM05D006244 ORTHO05D007401 1.5e-114 416.8 305 69.5
MD04G1042500 Malus domestica HOM05D006244 ORTHO05D007401 4.3e-114 415.2 302 70.2
Gohir.A10G138500 Gossypium hirsutum HOM05D006244 ORTHO05D007401 5.6e-114 414.8 305 70.2
FvH4_4g10850 Fragaria vesca HOM05D006244 ORTHO05D007401 7.3e-114 414.5 297 69.7
FAN12G2117 Fragaria x ananassa HOM05D006244 ORTHO05D007401 7.3e-114 414.5 297 69.7
Potri.017G028900 Populus trichocarpa HOM05D006244 ORTHO05D007401 2.1e-113 412.9 300 68.0
Ciclev10021382m.g Citrus clementina HOM05D006244 ORTHO05D007401 2.8e-113 412.5 300 70.0
GSVIVG01010791001 Vitis vinifera HOM05D006244 ORTHO05D007401 4.7e-113 411.8 297 72.1
COL.COLO4_12977 Corchorus olitorius HOM05D006244 ORTHO05D007401 2.3e-112 409.5 329 64.4
Atru.chr4.1240 Acer truncatum HOM05D006244 ORTHO05D007401 1.3e-110 403.7 300 68.7
Hma1.2p1_0324F.1_g125510 Hydrangea macrophylla HOM05D006244 ORTHO05D007401 7.0e-109 397.9 305 65.6
Thecc.04G177000 Theobroma cacao HOM05D006244 ORTHO05D007401 1.2e-108 397.1 305 66.9
THA.LOC104803749 Tarenaya hassleriana HOM05D006244 ORTHO05D007401 1.6e-108 396.7 305 66.2
Cpa.g.sc9.298 Carica papaya HOM05D006244 ORTHO05D007401 1.3e-107 393.7 299 67.9
Sabra17G0017500 Salix brachista HOM05D006244 ORTHO05D007401 3.9e-107 392.1 300 65.0
Lalb_Chr22g0352091 Lupinus albus HOM05D006244 ORTHO05D007401 2.5e-106 389.4 305 65.2
Lj3g0008901 Lotus japonicus HOM05D006244 ORTHO05D007401 1.0e-104 384.0 305 64.3
Eucgr.H00368 Eucalyptus grandis HOM05D006244 ORTHO05D007401 1.4e-104 383.6 308 61.7
Rhsim09G0025200 Rhododendron simsii HOM05D006244 ORTHO05D007401 8.9e-104 380.9 362 54.7
MELO3C009823.2 Cucumis melo HOM05D006244 ORTHO05D007401 2.6e-103 379.4 305 63.3
ClCG10G015550 Citrullus lanatus HOM05D006244 ORTHO05D007401 9.8e-103 377.5 304 63.2
CsaV3_3G040880 Cucumis sativus L. HOM05D006244 ORTHO05D007401 9.8e-103 377.5 305 63.3
TWI38G0370 Tripterygium wilfordii HOM05D006244 ORTHO05D007401 2.2e-102 376.3 301 63.8
arahy.Tifrunner.gnm1.ann1.LPC3IP Arachis hypogaea HOM05D006244 ORTHO05D007401 2.9e-102 375.9 304 62.8
AT3G59490 Arabidopsis thaliana HOM05D006244 ORTHO05D007401 4.9e-102 375.2 305 63.3
Sc19g0002910 Simmondsia chinensis HOM05D006244 ORTHO05D007401 1.1e-101 374.0 305 59.7
Sp5g03670 Schrenkiella parvula HOM05D006244 ORTHO05D007401 4.1e-101 372.1 305 63.0
CARHR169870 Cardamine hirsuta HOM05D006244 ORTHO05D007401 5.4e-101 371.7 305 63.0
PGSC0003DMG400022864 Solanum tuberosum HOM05D006244 ORTHO05D007401 9.2e-101 370.9 307 61.6
Solyc11g045210.2 Solanum lycopersicum HOM05D006244 ORTHO05D007401 2.7e-100 369.4 307 60.9
Aqoxy2G04144 Aquilegia oxysepala HOM05D006244 ORTHO05D007401 6.0e-100 368.2 303 62.4
Sopen11g020640 Solanum pennellii HOM05D006244 ORTHO05D007401 6.0e-100 368.2 307 60.9
Carub.0005s2622 Capsella rubella HOM05D006244 ORTHO05D007401 3.0e-99 365.9 305 62.0
Thhalv10006132m.g Eutrema salsugineum HOM05D006244 ORTHO05D007401 3.0e-99 365.9 305 63.6
Nitab4.5_0008822g0040 Nicotiana tabacum HOM05D006244 ORTHO05D007401 3.0e-99 365.9 305 61.3
AL5G41400 Arabidopsis lyrata HOM05D006244 ORTHO05D007401 8.6e-99 364.4 305 63.0
Nitab4.5_0004117g0020 Nicotiana tabacum HOM05D006244 ORTHO05D007401 1.9e-98 363.2 305 60.3
TPR.G18836 Trifolium pratense HOM05D006244 ORTHO05D007401 1.9e-98 363.2 305 62.0
Peaxi162Scf00126g00623 Petunia axillaris HOM05D006244 ORTHO05D007401 3.3e-98 362.5 307 60.3
EL10Ac3g05981 Beta vulgaris HOM05D006244 ORTHO05D007401 4.3e-98 362.1 305 61.3
PSO675G8539 Papaver somniferum HOM05D006244 ORTHO05D007401 9.5e-98 360.9 313 59.7
Hund03170 Selenicereus undatus HOM05D006244 ORTHO05D007401 9.5e-98 360.9 299 59.2
Glyma.15G029700 Glycine max HOM05D006244 ORTHO05D007401 1.6e-97 360.1 308 61.7
CAN.G31.8 Capsicum annuum HOM05D006244 ORTHO05D007401 3.6e-97 359.0 307 59.3
Medtr2g098960 Medicago truncatula HOM05D006244 ORTHO05D007401 3.6e-97 359.0 305 60.3
ECA248G0275 Erigeron canadensis HOM05D006244 ORTHO05D007401 1.1e-96 357.5 304 58.2
AUR62023861 Chenopodium quinoa HOM05D006244 ORTHO05D007401 1.4e-96 357.1 305 59.7
arahy.Tifrunner.gnm1.ann1.IE55HN Arachis hypogaea HOM05D006244 ORTHO05D007401 1.8e-96 356.7 294 61.6
A04p02170 Brassica napus HOM05D006244 ORTHO05D007401 2.3e-96 356.3 305 61.3
Psat5g289400 Pisum sativum HOM05D006244 ORTHO05D007401 3.1e-96 355.9 305 61.3
BcaC07g40479 Brassica carinata HOM05D006244 ORTHO05D007401 4.0e-96 355.5 304 61.5
BraA04t15944Z Brassica rapa HOM05D006244 ORTHO05D007401 5.2e-96 355.1 305 60.0
C08p34500 Brassica napus HOM05D006244 ORTHO05D007401 8.9e-96 354.4 305 61.0
BolC8t51051H Brassica oleracea HOM05D006244 ORTHO05D007401 8.9e-96 354.4 305 61.0
BcaB02g08221 Brassica carinata HOM05D006244 ORTHO05D007401 1.2e-95 354.0 305 62.0
PGR142G0422 Punica granatum HOM05D006244 ORTHO05D007401 2.0e-95 353.2 306 60.8
PSO732G0675 Papaver somniferum HOM05D006244 ORTHO05D007401 2.6e-95 352.8 303 59.7
BcaNung05942 Brassica carinata HOM05D006244 ORTHO05D007401 5.8e-95 351.7 293 62.8
Cc07_g21300 Coffea canephora HOM05D006244 ORTHO05D007401 9.8e-95 350.9 305 58.7
HanXRQChr11g0343701 Helianthus annuus HOM05D006244 ORTHO05D007401 1.3e-94 350.5 305 57.7
MBI08_g33169_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 3.7e-94 349.0 276 65.2
SalBow3G2237 Salvia bowleyana HOM05D006244 ORTHO05D007401 3.7e-94 349.0 305 57.0
A09p51770 Brassica napus HOM05D006244 ORTHO05D007401 6.4e-94 348.2 305 59.7
Lsat_1_v5_gn_1_77900 Lactuca sativa HOM05D006244 ORTHO05D007401 1.1e-93 347.4 305 57.7
MSTRG.9759 Avicennia marina HOM05D006244 ORTHO05D007401 3.5e-92 342.4 305 56.7
BcaC07g40478 Brassica carinata HOM05D006244 ORTHO05D007401 4.6e-92 342.0 304 59.2
AUR62002326 Chenopodium quinoa HOM05D006244 ORTHO05D007401 7.8e-92 341.3 305 58.4
Aa31LG10G13810 Aethionema arabicum HOM05D006244 ORTHO05D007401 2.3e-91 339.7 305 57.7
unitig_0.g2404 Utricularia gibba HOM05D006244 ORTHO05D007401 1.2e-89 334.0 305 55.1
BraA09t40612Z Brassica rapa HOM05D006244 ORTHO05D007401 3.6e-89 332.4 303 57.4
Ah.07g202200 Amaranthus hybridus HOM05D006244 ORTHO05D007401 8.1e-89 331.3 305 55.4
Nn3g18564 Nelumbo nucifera HOM05D006244 ORTHO05D007401 1.4e-88 330.5 305 56.4
Migut.G01000 Erythranthe guttata HOM05D006244 ORTHO05D007401 2.9e-86 322.8 309 55.0
ATR0743G009 Amborella trichopoda HOM05D006244 ORTHO05D007401 4.6e-84 315.5 306 51.6
BolC4t24903H Brassica oleracea HOM05D006244 ORTHO05D007401 1.2e-81 307.4 305 55.1
VMungo1080G0762 Vigna mungo HOM05D006244 ORTHO05D007401 6.2e-81 305.1 278 55.8
HPP92_001264 Vanilla planifolia HOM05D006244 ORTHO05D007401 8.1e-81 304.7 317 49.8
HPP92_001248 Vanilla planifolia HOM05D006244 ORTHO05D007401 1.4e-80 303.9 317 49.8
DCAR_028445 Daucus carota HOM05D006244 ORTHO05D007401 6.0e-76 288.5 269 54.6
Actinidia27645 Actinidia chinensis HOM05D006244 ORTHO05D007401 1.0e-75 287.7 210 67.6
Phvul.005G153400 Phaseolus vulgaris HOM05D006244 ORTHO05D007401 6.6e-75 285.0 307 50.5
Cfa015178 Carpinus fangiana HOM05D006244 ORTHO05D007401 8.4e-70 268.1 188 76.1
FAN17G1708 Fragaria x ananassa HOM05D006244 ORTHO05D007401 5.4e-69 265.4 200 67.5
C04p33420 Brassica napus HOM05D006244 ORTHO05D007401 1.8e-67 260.4 305 51.5
Sed0026513 Sechium edule HOM05D006244 ORTHO05D007401 3.0e-67 259.6 242 57.9
Lju337A6T20 Lonicera japonica HOM05D006244 ORTHO05D007401 9.6e-66 254.6 271 52.0
vmacro00644 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 2.1e-65 253.4 201 62.2
Zm00001eb318410 Zea mays HOM05D006244 ORTHO05D007401 1.1e-45 188.0 250 42.0
MBI08_g09972_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 4.2e-45 186.0 192 55.7
C04p32460 Brassica napus HOM05D006244 ORTHO05D007401 1.6e-36 157.5 217 44.2
vmacro00645 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 4.6e-36 156.0 104 69.2
Pp3c9_3600 Physcomitrium patens HOM05D006244 ORTHO05D007401 5.7e-34 149.1 305 30.5
Psat5g289440 Pisum sativum HOM05D006244 ORTHO05D007401 1.1e-32 144.8 121 60.3
Peaxi162Scf01193g00009 Petunia axillaris HOM05D006244 ORTHO05D007401 2.5e-29 133.7 127 53.5
Peaxi162Scf00066g02019 Petunia axillaris HOM05D006244 ORTHO05D007401 2.7e-28 130.2 127 52.0
Peaxi162Scf00533g00611 Petunia axillaris HOM05D006244 ORTHO05D007401 2.7e-28 130.2 127 52.0
Sabra17G0062000 Salix brachista HOM05D006244 ORTHO05D007401 2.7e-28 130.2 120 55.8
Peaxi162Scf00272g00041 Petunia axillaris HOM05D006244 ORTHO05D007401 8.0e-28 128.6 120 54.2
Lj6A77G23 Lonicera japonica HOM05D006244 ORTHO05D007401 1.4e-27 127.9 103 63.1
Peaxi162Scf00627g00001 Petunia axillaris HOM05D006244 ORTHO05D007401 4.4e-26 122.9 120 52.5
Os09g0515300 Oryza sativa ssp. japonica HOM05D006244 ORTHO05D007401 2.8e-25 120.2 141 45.4
Peaxi162Scf00404g00815 Petunia axillaris HOM05D006244 ORTHO05D007401 5.3e-24 115.9 130 48.5
BcaC02g10138 Brassica carinata HOM05D006244 ORTHO05D007401 2.9e-22 110.2 254 38.6
SMO364G0376 Selaginella moellendorffii HOM05D006244 ORTHO05D007401 1.9e-21 107.5 282 29.4
Lju337A6G22 Lonicera japonica HOM05D006244 ORTHO05D007401 5.5e-21 105.9 67 74.6
Lj6C77T3 Lonicera japonica HOM05D006244 ORTHO05D007401 7.2e-21 105.5 67 74.6
Glyma.13G344600 Glycine max HOM05D006244 ORTHO05D007401 1.4e-19 101.3 67 71.6
Zm00001eb239190 Zea mays HOM05D001072 ORTHO05D007401 2.7e-12 77.0 64 54.7
Peaxi162Scf00255g00049 Petunia axillaris HOM05D006244 ORTHO05D007401 6.3e-09 65.9 81 43.2
AagrBONN_evm.TU.Sc2ySwM_228.3866 Anthoceros agrestis HOM05D006244 ORTHO05D007401 7.0e-08 62.4 168 31.0


User provided reference genes

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