Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p007069 Quercus lobata HOM05D000615 ORTHO05D000447 6.0e-74 280.8 147 100.0
QL05p006982 Quercus lobata HOM05D000615 ORTHO05D000447 1.0e-57 226.9 144 85.4
CiPaw.01G191700 Carya illinoinensis HOM05D000615 ORTHO05D000447 5.9e-21 104.8 170 41.8
Cfa008387 Carpinus fangiana HOM05D000615 ORTHO05D000447 9.5e-19 97.4 190 41.1
QL06p015469 Quercus lobata HOM05D000615 ORTHO05D000447 4.0e-17 92.0 189 38.6
CiPaw.01G191300 Carya illinoinensis HOM05D000615 ORTHO05D000447 1.2e-16 90.5 189 38.1
QL06p015499 Quercus lobata HOM05D000615 ORTHO05D000447 2.6e-16 89.4 180 36.7
QL06p015544 Quercus lobata HOM05D000615 ORTHO05D000447 2.6e-16 89.4 180 36.7
QL06p015434 Quercus lobata HOM05D000615 ORTHO05D000447 5.7e-16 88.2 190 37.4
RcHm_v2.0_Chr4g0389751 Rosa chinensis HOM05D000615 ORTHO05D000447 7.5e-16 87.8 180 36.1
RcHm_v2.0_Chr4g0389771 Rosa chinensis HOM05D000615 ORTHO05D000447 1.7e-15 86.7 180 36.1
FvH4_4g02460 Fragaria vesca HOM05D000615 ORTHO05D000447 2.8e-15 85.9 180 36.1
FAN12G2024 Fragaria x ananassa HOM05D000615 ORTHO05D000447 2.8e-15 85.9 180 36.1
FAN17G2191 Fragaria x ananassa HOM05D000615 ORTHO05D000447 2.8e-15 85.9 180 36.1
QL06p015361 Quercus lobata HOM05D000615 ORTHO05D000447 2.8e-15 85.9 190 36.3
Prupe.1G028800 Prunus persica HOM05D000615 ORTHO05D000447 3.7e-15 85.5 194 35.1
RcHm_v2.0_Chr4g0389791 Rosa chinensis HOM05D000615 ORTHO05D000447 3.7e-15 85.5 180 35.0
CiPaw.01G191800 Carya illinoinensis HOM05D000615 ORTHO05D000447 4.9e-15 85.1 166 37.3
CiPaw.01G191200 Carya illinoinensis HOM05D000615 ORTHO05D000447 6.3e-15 84.7 166 38.0
Cfa008386 Carpinus fangiana HOM05D000615 ORTHO05D000447 8.3e-15 84.3 191 35.6
CiPaw.01G191400 Carya illinoinensis HOM05D000615 ORTHO05D000447 1.1e-14 84.0 166 37.3
FvH4_4g02480 Fragaria vesca HOM05D000615 ORTHO05D000447 1.8e-14 83.2 190 34.7
FAN12G4284 Fragaria x ananassa HOM05D000615 ORTHO05D000447 1.8e-14 83.2 190 34.7
RcHm_v2.0_Chr4g0389901 Rosa chinensis HOM05D000615 ORTHO05D000447 1.8e-14 83.2 194 34.0
MD16G1207500 Malus domestica HOM05D000615 ORTHO05D000447 4.1e-14 82.0 194 35.6
MD16G1207600 Malus domestica HOM05D000615 ORTHO05D000447 4.1e-14 82.0 180 35.0
Cfa008388 Carpinus fangiana HOM05D000615 ORTHO05D000447 1.2e-13 80.5 189 34.9
CiPaw.01G191100 Carya illinoinensis HOM05D000615 ORTHO05D000447 1.2e-13 80.5 195 35.4
MD13G1206000 Malus domestica HOM05D000615 ORTHO05D000447 2.0e-13 79.7 174 35.1
Glyma.20G204500 Glycine max HOM05D000615 ORTHO05D000447 3.5e-13 79.0 172 33.7
QL06p015565 Quercus lobata HOM05D000615 ORTHO05D000447 4.5e-13 78.6 190 34.2
Prupe.1G028400 Prunus persica HOM05D000615 ORTHO05D000447 5.9e-13 78.2 172 34.3
RcHm_v2.0_Chr4g0412411 Rosa chinensis HOM05D000615 ORTHO05D000447 5.9e-13 78.2 179 33.5
CANSAT78G0132 Cannabis sativa HOM05D000615 ORTHO05D000447 7.8e-13 77.8 201 32.3
Lj5g0015603 Lotus japonicus HOM05D000615 ORTHO05D000447 7.8e-13 77.8 174 33.3
CiPaw.01G191000 Carya illinoinensis HOM05D000615 ORTHO05D000447 1.7e-12 76.6 185 32.4
CiPaw.01G191900 Carya illinoinensis HOM05D000615 ORTHO05D000447 1.7e-12 76.6 182 33.0
CANSAT78G1655 Cannabis sativa HOM05D000615 ORTHO05D000447 2.3e-12 76.3 181 30.9
arahy.Tifrunner.gnm1.ann1.7FGL0C Arachis hypogaea HOM05D000615 ORTHO05D000447 2.9e-12 75.9 174 33.3
arahy.Tifrunner.gnm1.ann1.YILV44 Arachis hypogaea HOM05D000615 ORTHO05D000447 2.9e-12 75.9 174 32.8
Psat6g128360 Pisum sativum HOM05D000615 ORTHO05D000447 3.8e-12 75.5 167 33.5
QL06p015507 Quercus lobata HOM05D000615 ORTHO05D000447 3.8e-12 75.5 190 33.7
Glyma.10G185800 Glycine max HOM05D000615 ORTHO05D000447 6.6e-12 74.7 174 32.2
FvH4_6g05920 Fragaria vesca HOM05D000615 ORTHO05D000447 1.1e-11 73.9 165 35.2
FAN11G2647 Fragaria x ananassa HOM05D000615 ORTHO05D000447 1.1e-11 73.9 165 35.2
FvH4_4g02370 Fragaria vesca HOM05D000615 ORTHO05D000447 1.5e-11 73.6 165 35.2
FvH4_4g02430 Fragaria vesca HOM05D000615 ORTHO05D000447 1.5e-11 73.6 165 35.2
arahy.Tifrunner.gnm1.ann1.0FAD3S Arachis hypogaea HOM05D000615 ORTHO05D000447 1.9e-11 73.2 169 32.0
arahy.Tifrunner.gnm1.ann1.89XXPU Arachis hypogaea HOM05D000615 ORTHO05D000447 1.9e-11 73.2 169 32.0
FAN17G1035 Fragaria x ananassa HOM05D000615 ORTHO05D000447 2.5e-11 72.8 164 34.8
Prupe.1G029000 Prunus persica HOM05D000615 ORTHO05D000447 2.5e-11 72.8 173 34.1
Glyma.20G204400 Glycine max HOM05D000615 ORTHO05D000447 3.3e-11 72.4 166 33.1
Medtr1g074950 Medicago truncatula HOM05D000615 ORTHO05D000447 3.3e-11 72.4 174 32.2
Prupe.1G028500 Prunus persica HOM05D000615 ORTHO05D000447 3.3e-11 72.4 190 33.2
arahy.Tifrunner.gnm1.ann1.GVM1TH Arachis hypogaea HOM05D000615 ORTHO05D000447 4.3e-11 72.0 166 33.1
QL03p030631 Quercus lobata HOM05D000615 ORTHO05D000447 4.3e-11 72.0 184 30.4
arahy.Tifrunner.gnm1.ann1.4D3FVT Arachis hypogaea HOM05D000615 ORTHO05D000447 5.6e-11 71.6 166 33.1
Glyma.10G185850 Glycine max HOM05D000615 ORTHO05D000447 9.5e-11 70.9 172 31.4
Phvul.L001759 Phaseolus vulgaris HOM05D000615 ORTHO05D000447 9.5e-11 70.9 177 31.1
Lalb_Chr02g0150441 Lupinus albus HOM05D000615 ORTHO05D000447 1.2e-10 70.5 176 34.7
FAN22G2002 Fragaria x ananassa HOM05D000615 ORTHO05D000447 1.6e-10 70.1 164 34.1
Cfa004423 Carpinus fangiana HOM05D000615 ORTHO05D000447 3.6e-10 68.9 95 48.4
VMungo0720G1150 Vigna mungo HOM05D000615 ORTHO05D000447 3.6e-10 68.9 177 31.1
Ca_09829_v3 Cicer arietinum L. HOM05D000615 ORTHO05D000447 4.7e-10 68.6 167 32.3
Medtr1g074990 Medicago truncatula HOM05D000615 ORTHO05D000447 4.7e-10 68.6 167 32.3
CANSAT21G1809 Cannabis sativa HOM05D000615 ORTHO05D000447 1.0e-09 67.4 171 30.4
Lj5g0018723 Lotus japonicus HOM05D000615 ORTHO05D000447 1.4e-09 67.0 167 29.9
CANSAT78G1350 Cannabis sativa HOM05D000615 ORTHO05D000447 1.8e-09 66.6 188 28.2
TPR.G28888 Trifolium pratense HOM05D000615 ORTHO05D000447 3.1e-09 65.9 166 32.5
arahy.Tifrunner.gnm1.ann1.N9PH3H Arachis hypogaea HOM05D000615 ORTHO05D000447 5.2e-09 65.1 174 29.3
arahy.Tifrunner.gnm1.ann1.D1TD5B Arachis hypogaea HOM05D000615 ORTHO05D000447 6.8e-09 64.7 174 28.7
CiPaw.01G190900 Carya illinoinensis HOM05D000615 ORTHO05D000447 1.2e-08 63.9 191 28.8
Cfa013104 Carpinus fangiana HOM05D000615 ORTHO05D000447 1.5e-08 63.5 102 44.1
Medtr1g075230 Medicago truncatula HOM05D000615 ORTHO05D000447 3.4e-08 62.4 166 30.1
Medtr1g075030 Medicago truncatula HOM05D000615 ORTHO05D000447 7.5e-08 61.2 169 27.8
Cfa004436 Carpinus fangiana HOM05D000615 ORTHO05D000447 9.8e-08 60.8 83 45.8
Medtr1g075095 Medicago truncatula HOM05D000615 ORTHO05D000447 9.8e-08 60.8 169 30.2
CANSAT78G0656 Cannabis sativa HOM05D000615 ORTHO05D000447 1.7e-07 60.1 184 31.5
QL05p007135 Quercus lobata HOM05D000615 ORTHO05D000447 3.7e-07 58.9 169 30.2
QL06p015587 Quercus lobata HOM05D000615 ORTHO05D000447 2.4e-06 56.2 180 28.3
VMungo0720G3187 Vigna mungo HOM05D000615 ORTHO05D000447 2.4e-06 56.2 177 28.8
TPR.G28887 Trifolium pratense HOM05D000615 ORTHO05D000447 7.0e-06 54.7 158 30.4


User provided reference genes

Program Settings