Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p001541 Quercus lobata HOM05D003357 ORTHO05D003779 1.5e-130 469.5 236 100.0
QL05p001815 Quercus lobata HOM05D003357 ORTHO05D003779 1.5e-130 469.5 236 100.0
CiPaw.02G132100 Carya illinoinensis HOM05D003357 ORTHO05D003779 4.2e-69 265.4 204 67.6
MD17G1152300 Malus domestica HOM05D003357 ORTHO05D003779 1.6e-60 236.9 217 58.5
Prupe.3G032500 Prunus persica HOM05D003357 ORTHO05D003779 1.4e-59 233.8 227 56.4
RcHm_v2.0_Chr2g0147641 Rosa chinensis HOM05D003357 ORTHO05D003779 3.0e-59 232.6 230 55.7
CANSAT56G4096 Cannabis sativa HOM05D003357 ORTHO05D003779 4.8e-57 225.3 224 52.7
Gohir.D05G143300 Gossypium hirsutum HOM05D003357 ORTHO05D003779 3.1e-56 222.6 236 51.3
Gohir.A05G141100 Gossypium hirsutum HOM05D003357 ORTHO05D003779 7.0e-56 221.5 227 52.4
Gorai.009G147200 Gossypium raimondii HOM05D003357 ORTHO05D003779 4.5e-55 218.8 236 50.8
FAN05G0423 Fragaria x ananassa HOM05D003357 ORTHO05D003779 2.9e-54 216.1 228 53.9
Dinv37830 Davidia involucrata HOM05D003357 ORTHO05D003779 1.1e-53 214.2 198 58.1
Duzib235G0273 Durio zibethinus HOM05D003357 ORTHO05D003779 6.1e-52 208.4 227 52.0
FvH4_6g35660 Fragaria vesca HOM05D003357 ORTHO05D003779 6.3e-49 198.4 183 56.8
Hma1.2p1_0090F.1_g045910 Hydrangea macrophylla HOM05D003357 ORTHO05D003779 9.1e-48 194.5 199 52.3
Sabra01G0129000 Salix brachista HOM05D003357 ORTHO05D003779 1.5e-45 187.2 248 41.9
Ciclev10026388m.g Citrus clementina HOM05D003357 ORTHO05D003779 3.6e-44 182.6 235 42.6
Manes.04G150000 Manihot esculenta HOM05D003357 ORTHO05D003779 1.0e-43 181.0 193 46.6
Potri.001G163800 Populus trichocarpa HOM05D003357 ORTHO05D003779 1.0e-43 181.0 235 43.0
MBI13_g01678_MAGBIO Magnolia biondii HOM05D003357 ORTHO05D003779 9.8e-42 174.5 232 40.5
Migut.I01123 Erythranthe guttata HOM05D003357 ORTHO05D003779 3.7e-41 172.6 213 44.6
Sc15g0000760 Simmondsia chinensis HOM05D003357 ORTHO05D003779 2.9e-38 162.9 177 44.6
Nitab4.5_0003987g0080 Nicotiana tabacum HOM05D003357 ORTHO05D003779 1.9e-37 160.2 190 48.4
Atru.chr1.4118 Acer truncatum HOM05D003357 ORTHO05D003779 3.3e-37 159.5 213 49.3
SalBow2G0668 Salvia bowleyana HOM05D003357 ORTHO05D003779 6.1e-36 155.2 214 42.5
CsaV3_7G034060 Cucumis sativus L. HOM05D003357 ORTHO05D003779 3.0e-35 152.9 216 39.8
COL.COLO4_30848 Corchorus olitorius HOM05D003357 ORTHO05D003779 8.9e-35 151.4 158 50.6
MELO3C024316.2 Cucumis melo HOM05D003357 ORTHO05D003779 2.0e-34 150.2 227 39.2
Peaxi162Scf00038g02213 Petunia axillaris HOM05D003357 ORTHO05D003779 5.7e-34 148.7 171 48.5
Sed0022278 Sechium edule HOM05D003357 ORTHO05D003779 1.7e-33 147.1 224 39.3
Solyc03g123510.3 Solanum lycopersicum HOM05D003357 ORTHO05D003779 1.8e-32 143.7 192 42.2
DCAR_016095 Daucus carota HOM05D003357 ORTHO05D003779 5.4e-32 142.1 200 40.0
Nitab4.5_0015287g0010 Nicotiana tabacum HOM05D003357 ORTHO05D003779 1.3e-30 137.5 200 42.5
CAN.G790.70 Capsicum annuum HOM05D003357 ORTHO05D003779 2.8e-28 129.8 172 43.6
Oeu013442.1 Olea europaea HOM05D000643 ORTHO05D000663 1.0e-27 127.9 180 40.6
Lsat_1_v5_gn_0_41661 Lactuca sativa HOM05D003357 ORTHO05D003779 1.8e-27 127.1 194 35.1
SGA_v2.0_scaffold71G23911 Striga asiatica HOM05D003357 ORTHO05D003779 1.3e-25 120.9 175 40.0
ATR0317G009 Amborella trichopoda HOM05D003357 ORTHO05D003779 3.2e-24 116.3 205 32.2
CDE06G1413 Ceratophyllum demersum HOM05D003357 ORTHO05D003779 1.4e-19 100.9 183 31.7
HanXRQChr15g0497241 Helianthus annuus HOM05D003357 ORTHO05D003779 3.1e-19 99.8 203 31.5
CDE06G2726 Ceratophyllum demersum HOM05D003357 ORTHO05D003779 1.2e-18 97.8 185 32.4
Zm00001eb011530 Zea mays HOM05D003357 ORTHO05D003779 7.5e-18 95.1 156 34.6
SEGI_11822 Sequoiadendron giganteum HOM05D003357 ORTHO05D003779 1.4e-16 90.9 191 29.3
Lj6g0024688 Lotus japonicus HOM05D003357 ORTHO05D003779 2.7e-15 86.7 149 32.2
Lsat_1_v5_gn_7_78341 Lactuca sativa HOM05D003357 ORTHO05D003779 7.8e-15 85.1 151 32.5
HanXRQChr16g0514191 Helianthus annuus HOM05D003357 ORTHO05D003779 1.3e-14 84.3 175 32.0
MBI06_g01047_MAGBIO Magnolia biondii HOM05D003357 ORTHO05D003779 1.7e-14 84.0 149 30.9
Ca_29933_v3 Cicer arietinum L. HOM05D003357 ORTHO05D003779 3.0e-14 83.2 148 31.8
Os03g0262700 Oryza sativa ssp. japonica HOM05D003357 ORTHO05D003779 3.0e-14 83.2 180 32.2
Glyma.08G184000 Glycine max HOM05D003357 ORTHO05D003779 3.9e-14 82.8 148 30.4
Phvul.006G211600 Phaseolus vulgaris HOM05D003357 ORTHO05D003779 3.9e-14 82.8 148 29.7
Zm00001eb398130 Zea mays HOM05D003357 ORTHO05D003779 5.1e-14 82.4 133 35.3
ClCG00G003530 Citrullus lanatus HOM05D003357 ORTHO05D003779 6.6e-14 82.0 148 30.4
ClCG09G014530 Citrullus lanatus HOM05D003357 ORTHO05D003779 6.6e-14 82.0 148 30.4
Lj9A312T45 Lonicera japonica HOM05D003357 ORTHO05D003779 6.6e-14 82.0 150 31.3
Sed0024772 Sechium edule HOM05D003357 ORTHO05D003779 6.6e-14 82.0 152 31.6
VMungo0540G1809 Vigna mungo HOM05D003357 ORTHO05D003779 6.6e-14 82.0 148 29.7
Dinv24254 Davidia involucrata HOM05D003357 ORTHO05D003779 8.6e-14 81.6 152 29.6
HanXRQChr11g0337561 Helianthus annuus HOM05D003357 ORTHO05D003779 8.6e-14 81.6 144 30.6
unitig_749.g13510 Utricularia gibba HOM05D000349 ORTHO05D003779 8.6e-14 81.6 144 31.2
Actinidia39063 Actinidia chinensis HOM05D003357 ORTHO05D003779 1.1e-13 81.3 185 29.7
Gorai.002G001400 Gossypium raimondii HOM05D003357 ORTHO05D003779 1.1e-13 81.3 171 30.4
SEGI_24152 Sequoiadendron giganteum HOM05D003357 ORTHO05D003779 1.1e-13 81.3 151 31.8
TPR.G19716 Trifolium pratense HOM05D003357 ORTHO05D003779 1.5e-13 80.9 150 30.0
arahy.Tifrunner.gnm1.ann1.I2CYKQ Arachis hypogaea HOM05D003357 ORTHO05D003779 1.9e-13 80.5 153 32.0
CAN.G1352.13 Capsicum annuum HOM05D003357 ORTHO05D003779 2.5e-13 80.1 152 31.6
Glyma.15G048800 Glycine max HOM05D003357 ORTHO05D003779 2.5e-13 80.1 147 29.9
Gohir.D01G000900 Gossypium hirsutum HOM05D003357 ORTHO05D003779 2.5e-13 80.1 171 29.8
arahy.Tifrunner.gnm1.ann1.11V3F3 Arachis hypogaea HOM05D003357 ORTHO05D003779 3.3e-13 79.7 156 32.1
Gohir.A01G001200 Gossypium hirsutum HOM05D003357 ORTHO05D003779 3.3e-13 79.7 171 29.8
Cpa.g.sc2.31 Carica papaya HOM05D003357 ORTHO05D003779 4.3e-13 79.3 159 28.9
TWI14G1244 Tripterygium wilfordii HOM05D003357 ORTHO05D003779 4.3e-13 79.3 159 28.9
HanXRQChr10g0300241 Helianthus annuus HOM05D003357 ORTHO05D003779 5.6e-13 79.0 155 29.0
Nitab4.5_0003071g0080 Nicotiana tabacum HOM05D003357 ORTHO05D003779 5.6e-13 79.0 158 29.7
Nitab4.5_0009907g0030 Nicotiana tabacum HOM05D003357 ORTHO05D003779 5.6e-13 79.0 152 30.9
Lsat_1_v5_gn_5_107641 Lactuca sativa HOM05D003357 ORTHO05D003779 7.3e-13 78.6 161 28.6
Lalb_Chr20g0123351 Lupinus albus HOM05D003357 ORTHO05D003779 7.3e-13 78.6 155 28.4
Sopen03g041280 Solanum pennellii HOM05D003357 ORTHO05D003779 7.3e-13 78.6 122 36.1
SGA_v2.0_scaffold110G31275 Striga asiatica HOM05D003357 ORTHO05D003779 7.3e-13 78.6 124 34.7
CSS0046968 Camellia sinensis var. sinensis HOM05D003357 ORTHO05D003779 9.5e-13 78.2 154 31.8
Atru.chr6.1007 Acer truncatum HOM05D003357 ORTHO05D003779 1.2e-12 77.8 161 28.0
ATR0121G007 Amborella trichopoda HOM05D003357 ORTHO05D003779 1.2e-12 77.8 167 28.7
CARHR143630 Cardamine hirsuta HOM05D003357 ORTHO05D003779 1.2e-12 77.8 151 29.1
TWI23G0276 Tripterygium wilfordii HOM05D003357 ORTHO05D003779 1.2e-12 77.8 159 28.9
CiPaw.06G149700 Carya illinoinensis HOM05D003357 ORTHO05D003779 1.6e-12 77.4 161 29.2
Sc02g0001800 Simmondsia chinensis HOM05D003357 ORTHO05D003779 1.6e-12 77.4 163 30.1
FvH4_5g29780 Fragaria vesca HOM05D003357 ORTHO05D003779 2.1e-12 77.0 152 28.3
FAN08G0651 Fragaria x ananassa HOM05D003357 ORTHO05D003779 2.1e-12 77.0 152 28.3
FAN18G4337 Fragaria x ananassa HOM05D003357 ORTHO05D003779 2.1e-12 77.0 152 28.3
Gohir.D02G232200 Gossypium hirsutum HOM05D003357 ORTHO05D003779 2.1e-12 77.0 162 28.4
Gorai.005G260000 Gossypium raimondii HOM05D003357 ORTHO05D003779 2.1e-12 77.0 162 28.4
Hma1.2p1_0704F.1_g206850 Hydrangea macrophylla HOM05D003357 ORTHO05D003779 2.1e-12 77.0 154 30.5
Peaxi162Scf00011g00031 Petunia axillaris HOM05D003357 ORTHO05D003779 2.1e-12 77.0 162 29.0
PGSC0003DMG400029777 Solanum tuberosum HOM05D003357 ORTHO05D003779 2.1e-12 77.0 155 30.3
SGA_v2.0_scaffold1G00338 Striga asiatica HOM05D003357 ORTHO05D003779 2.1e-12 77.0 124 33.1
Thecc.02G042200 Theobroma cacao HOM05D003357 ORTHO05D003779 2.1e-12 77.0 162 27.8
Gohir.A03G210600 Gossypium hirsutum HOM05D003357 ORTHO05D003779 2.8e-12 76.6 162 28.4
Ciclev10002130m.g Citrus clementina HOM05D003357 ORTHO05D003779 3.6e-12 76.3 164 27.4
Medtr2g007830 Medicago truncatula HOM05D003357 ORTHO05D003779 3.6e-12 76.3 153 29.4
Peaxi162Scf00003g03752 Petunia axillaris HOM05D003357 ORTHO05D003779 3.6e-12 76.3 157 29.9
PGR142G3651 Punica granatum HOM05D003357 ORTHO05D003779 3.6e-12 76.3 164 29.3
DCAR_021821 Daucus carota HOM05D003357 ORTHO05D003779 4.7e-12 75.9 153 30.7
MSTRG.16542 Avicennia marina HOM05D003357 ORTHO05D003779 6.2e-12 75.5 158 27.2
PSO421G0588 Papaver somniferum HOM05D003357 ORTHO05D003779 6.2e-12 75.5 159 32.7
AL5G10030 Arabidopsis lyrata HOM05D003357 ORTHO05D003779 8.1e-12 75.1 152 28.3
AT2G01080 Arabidopsis thaliana HOM05D003357 ORTHO05D003779 8.1e-12 75.1 152 28.3
ClCG05G009890 Citrullus lanatus HOM05D003357 ORTHO05D003779 8.1e-12 75.1 160 28.8
Duzib052G0578 Durio zibethinus HOM05D003357 ORTHO05D003779 8.1e-12 75.1 166 28.3
FAN13G0157 Fragaria x ananassa HOM05D003357 ORTHO05D003779 8.1e-12 75.1 152 27.6
Solyc01g104580.3 Solanum lycopersicum HOM05D003357 ORTHO05D003779 8.1e-12 75.1 155 29.7
Sopen01g047090 Solanum pennellii HOM05D003357 ORTHO05D003779 8.1e-12 75.1 155 29.7
Cfa005555 Carpinus fangiana HOM05D003357 ORTHO05D003779 1.1e-11 74.7 159 28.9
Ca_00094_v3 Cicer arietinum L. HOM05D003357 ORTHO05D003779 1.1e-11 74.7 136 31.6
Thhalv10001009m.g Eutrema salsugineum HOM05D003357 ORTHO05D003779 1.1e-11 74.7 156 26.3
MD08G1227400 Malus domestica HOM05D003357 ORTHO05D003779 1.1e-11 74.7 158 27.2
Nitab4.5_0003615g0040 Nicotiana tabacum HOM05D003357 ORTHO05D003779 1.1e-11 74.7 156 30.8
Carub.0005s0007 Capsella rubella HOM05D003357 ORTHO05D003779 1.4e-11 74.3 152 28.3
SalBow5G0183 Salvia bowleyana HOM05D003357 ORTHO05D003779 1.4e-11 74.3 174 31.6
HPP92_011155 Vanilla planifolia HOM05D003357 ORTHO05D003779 1.4e-11 74.3 164 29.3
BcaC06g34220 Brassica carinata HOM05D003357 ORTHO05D003779 1.8e-11 73.9 156 29.5
A06p44690 Brassica napus HOM05D003357 ORTHO05D003779 1.8e-11 73.9 156 29.5
BolC7t43694H Brassica oleracea HOM05D003357 ORTHO05D003779 1.8e-11 73.9 156 29.5
BraA06t27342Z Brassica rapa HOM05D003357 ORTHO05D003779 1.8e-11 73.9 156 29.5
QL11p019146 Quercus lobata HOM05D003357 ORTHO05D003779 1.8e-11 73.9 160 26.9
Duzib248G1129 Durio zibethinus HOM05D003357 ORTHO05D003779 2.3e-11 73.6 162 27.2
TAR197G0001 Trochodendron aralioides HOM05D003357 ORTHO05D003779 2.3e-11 73.6 155 27.7
A02p31650 Brassica napus HOM05D003357 ORTHO05D003779 3.1e-11 73.2 156 29.5
C02p48990 Brassica napus HOM05D003357 ORTHO05D003779 3.1e-11 73.2 156 29.5
BolC2t10993H Brassica oleracea HOM05D003357 ORTHO05D003779 3.1e-11 73.2 156 29.5
BraA02t08168Z Brassica rapa HOM05D003357 ORTHO05D003779 3.1e-11 73.2 156 29.5
MSTRG.5244 Avicennia marina HOM05D003357 ORTHO05D003779 4.0e-11 72.8 130 30.8
MD15G1419800 Malus domestica HOM05D003357 ORTHO05D003779 4.0e-11 72.8 158 27.2
MELO3C012699.2 Cucumis melo HOM05D003357 ORTHO05D003779 5.2e-11 72.4 180 26.7
Prupe.1G564500 Prunus persica HOM05D003357 ORTHO05D003779 5.2e-11 72.4 162 27.2
RcHm_v2.0_Chr7g0223311 Rosa chinensis HOM05D003357 ORTHO05D003779 5.2e-11 72.4 119 32.8
THA.LOC104805045 Tarenaya hassleriana HOM05D003357 ORTHO05D003779 5.2e-11 72.4 157 27.4
CiPaw.05G042100 Carya illinoinensis HOM05D003357 ORTHO05D003779 6.8e-11 72.0 157 28.0
COL.COLO4_17901 Corchorus olitorius HOM05D005050 ORTHO05D006198 6.8e-11 72.0 152 29.6
Nn5g27960 Nelumbo nucifera HOM05D003357 ORTHO05D003779 6.8e-11 72.0 130 33.1
Migut.N01027 Erythranthe guttata HOM05D003357 ORTHO05D003779 8.9e-11 71.6 163 27.6
Psat1g219760 Pisum sativum HOM05D003357 ORTHO05D003779 8.9e-11 71.6 119 33.6
CsaV3_3G018700 Cucumis sativus L. HOM05D003357 ORTHO05D003779 1.2e-10 71.2 164 28.7
CsaV3_7G022210 Cucumis sativus L. HOM05D003357 ORTHO05D003779 2.0e-10 70.5 180 26.1
Lsat_1_v5_gn_9_116201 Lactuca sativa HOM05D003357 ORTHO05D003779 2.6e-10 70.1 171 28.7
PSO017G4220 Papaver somniferum HOM05D003357 ORTHO05D003779 2.6e-10 70.1 188 28.2
Sed0004213 Sechium edule HOM05D003357 ORTHO05D003779 2.6e-10 70.1 198 27.3
Haze_01610 Corylus avellana HOM05D003357 ORTHO05D003779 4.4e-10 69.3 135 31.1
Haze_01612 Corylus avellana HOM05D003357 ORTHO05D003779 4.4e-10 69.3 135 31.1
Oeu041075.1 Olea europaea HOM05D003357 ORTHO05D003779 4.4e-10 69.3 127 29.1
Potri.003G021934 Populus trichocarpa HOM05D003357 ORTHO05D003779 4.4e-10 69.3 168 26.8
SMO164G0048 Selaginella moellendorffii HOM05D003357 ORTHO05D003779 4.4e-10 69.3 194 25.3
Lj5C246T11 Lonicera japonica HOM05D003357 ORTHO05D003779 5.8e-10 68.9 131 32.1
Manes.07G012600 Manihot esculenta HOM05D003357 ORTHO05D003779 5.8e-10 68.9 165 26.7
Nitab4.5_0000078g0390 Nicotiana tabacum HOM05D003357 ORTHO05D003779 5.8e-10 68.9 133 32.3
Sp2g12550 Schrenkiella parvula HOM05D003357 ORTHO05D003779 5.8e-10 68.9 156 27.6
Aqoxy5G02480 Aquilegia oxysepala HOM05D003357 ORTHO05D003779 9.9e-10 68.2 172 25.0
Dinv19344 Davidia involucrata HOM05D003357 ORTHO05D003779 9.9e-10 68.2 156 26.9
SalBow5G2536 Salvia bowleyana HOM05D003357 ORTHO05D003779 9.9e-10 68.2 150 33.3
CSS0044852 Camellia sinensis var. sinensis HOM05D003357 ORTHO05D003779 1.3e-09 67.8 134 31.3
CANSAT11G1252 Cannabis sativa HOM05D003357 ORTHO05D003779 1.3e-09 67.8 183 25.7
Eucgr.I02708 Eucalyptus grandis HOM05D003357 ORTHO05D003779 2.9e-09 66.6 160 26.2
Potri.001G208000 Populus trichocarpa HOM05D003357 ORTHO05D003779 2.9e-09 66.6 166 24.7
vmacro01792 Vaccinium macrocarpon HOM05D003357 ORTHO05D003779 3.7e-09 66.2 146 31.5
Manes.10G133000 Manihot esculenta HOM05D003357 ORTHO05D003779 8.4e-09 65.1 172 26.2
Zm00001eb099990 Zea mays HOM05D003357 ORTHO05D003779 8.4e-09 65.1 197 25.9
PSO170G2411 Papaver somniferum HOM05D003357 ORTHO05D003779 1.4e-08 64.3 190 27.4
ECA234G2199 Erigeron canadensis HOM05D003357 ORTHO05D003779 2.4e-08 63.5 109 31.2
Sabra03G0013900 Salix brachista HOM05D003357 ORTHO05D003779 4.1e-08 62.8 149 29.5
Thecc.06G128300 Theobroma cacao HOM05D003357 ORTHO05D003779 7.1e-08 62.0 86 39.5
Aa31LG2G8800 Aethionema arabicum HOM05D003357 ORTHO05D003779 9.2e-08 61.6 159 27.7
ECA236G2437 Erigeron canadensis HOM05D003357 ORTHO05D003779 9.2e-08 61.6 184 24.5
SHI16610 Sapria himalayana HOM05D003357 ORTHO05D003779 1.2e-07 61.2 159 29.6
unitig_26.g9557 Utricularia gibba HOM05D003357 ORTHO05D003779 1.2e-07 61.2 115 30.4
MELO3C031692.2 Cucumis melo HOM05D003357 ORTHO05D003779 2.1e-07 60.5 170 26.5
Peaxi162Scf00018g00081 Petunia axillaris HOM05D003357 ORTHO05D003779 2.1e-07 60.5 89 34.8
Rhsim11G0132500 Rhododendron simsii HOM05D003357 ORTHO05D003779 2.1e-07 60.5 103 33.0
arahy.Tifrunner.gnm1.ann1.S31UIX Arachis hypogaea HOM05D003357 ORTHO05D003779 6.0e-07 58.9 177 24.9
Manes.10G036100 Manihot esculenta HOM05D003357 ORTHO05D003779 1.0e-06 58.2 148 27.7
Duzib150G0577 Durio zibethinus HOM05D000973 ORTHO05D000652 3.0e-06 56.6 114 35.1
Manes.03G085403 Manihot esculenta HOM05D003357 ORTHO05D003779 3.0e-06 56.6 148 27.0
Manes.03G114750 Manihot esculenta HOM05D003357 ORTHO05D003779 3.0e-06 56.6 148 27.0
Manes.12G086500 Manihot esculenta HOM05D003357 ORTHO05D003779 3.0e-06 56.6 148 27.0
ClCG03G014140 Citrullus lanatus HOM05D000973 ORTHO05D000652 5.1e-06 55.8 180 30.0
Manes.01G111900 Manihot esculenta HOM05D003357 ORTHO05D003779 5.1e-06 55.8 148 27.0
arahy.Tifrunner.gnm1.ann1.GBW8AP Arachis hypogaea HOM05D003357 ORTHO05D003779 8.6e-06 55.1 152 25.7


User provided reference genes

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