Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p000866 Quercus lobata HOM05D008671 ORTHO05D010581 2.2e-39 165.2 87 100.0
QL05p001127 Quercus lobata HOM05D008671 ORTHO05D010581 2.2e-39 165.2 87 100.0
Haze_16139 Corylus avellana HOM05D008671 ORTHO05D010581 1.3e-23 112.8 85 72.9
CiPaw.01G211300 Carya illinoinensis HOM05D008671 ORTHO05D010581 4.1e-22 107.8 86 75.6
FAN02G1967 Fragaria x ananassa HOM05D008671 ORTHO05D010581 3.4e-16 88.2 84 60.7
FAN05G1480 Fragaria x ananassa HOM05D008671 ORTHO05D010581 3.4e-16 88.2 84 60.7
FvH4_6g35870 Fragaria vesca HOM05D008671 ORTHO05D010581 4.4e-16 87.8 84 60.7
Thecc.06G130600 Theobroma cacao HOM05D008671 ORTHO05D010581 4.4e-16 87.8 90 60.0
FAN14G4480 Fragaria x ananassa HOM05D008671 ORTHO05D010581 4.9e-15 84.3 80 60.0
Prupe.3G030800 Prunus persica HOM05D008671 ORTHO05D010581 4.2e-14 81.3 85 56.5
Duzib235G0704 Durio zibethinus HOM05D008671 ORTHO05D010581 1.2e-13 79.7 90 55.6
MD09G1172400 Malus domestica HOM05D008671 ORTHO05D010581 2.1e-13 79.0 90 51.1
Ciclev10026867m.g Citrus clementina HOM05D008671 ORTHO05D010581 3.5e-13 78.2 79 59.5
COL.COLO4_30872 Corchorus olitorius HOM05D008671 ORTHO05D010581 1.7e-12 75.9 85 54.1
Manes.11G012400 Manihot esculenta HOM05D008671 ORTHO05D010581 2.3e-12 75.5 85 54.1
Potri.003G073050 Populus trichocarpa HOM05D008671 ORTHO05D010581 3.3e-11 71.6 86 55.8
Manes.04G151200 Manihot esculenta HOM05D008671 ORTHO05D010581 7.3e-11 70.5 84 52.4
Atru.chr1.4157 Acer truncatum HOM05D008671 ORTHO05D010581 3.6e-10 68.2 85 56.5
Sabra03G0043800 Salix brachista HOM05D008671 ORTHO05D010581 4.8e-10 67.8 86 54.7
Actinidia24423 Actinidia chinensis HOM05D008671 ORTHO05D010581 1.8e-09 65.9 80 55.0
Lj1g0013517 Lotus japonicus HOM05D008671 ORTHO05D010581 2.4e-09 65.5 81 53.1
Phvul.009G261500 Phaseolus vulgaris HOM05D008671 ORTHO05D010581 2.4e-09 65.5 86 51.2
Sopen03g041420 Solanum pennellii HOM05D008671 ORTHO05D010581 2.4e-09 65.5 85 54.1
Cpa.g.sc25.197 Carica papaya HOM05D008671 ORTHO05D010581 3.1e-09 65.1 90 48.9
Glyma.19G262200 Glycine max HOM05D008671 ORTHO05D010581 6.9e-09 63.9 88 48.9
Solyc03g123650.3 Solanum lycopersicum HOM05D008671 ORTHO05D010581 6.9e-09 63.9 85 52.9
Gohir.A09G075900 Gossypium hirsutum HOM05D037721 ORTHO05D010581 1.2e-08 63.2 88 52.3
Nitab4.5_0006338g0120 Nicotiana tabacum HOM05D008671 ORTHO05D010581 2.6e-08 62.0 78 51.3
Potri.001G162300 Populus trichocarpa HOM05D008671 ORTHO05D010581 4.4e-08 61.2 83 53.0
Glyma.07G046150 Glycine max HOM05D008671 ORTHO05D010581 1.7e-07 59.3 79 51.9
Gohir.D09G075600 Gossypium hirsutum HOM05D037721 ORTHO05D010581 3.8e-07 58.2 88 50.0
Gorai.006G090700 Gossypium raimondii HOM05D037721 ORTHO05D010581 3.8e-07 58.2 88 50.0
arahy.Tifrunner.gnm1.ann1.F447LS Arachis hypogaea HOM05D008671 ORTHO05D010581 6.4e-07 57.4 82 52.4
Dinv20379 Davidia involucrata HOM05D008671 ORTHO05D010581 1.1e-06 56.6 36 77.8
Glyma.16G014300 Glycine max HOM05D008671 ORTHO05D010581 1.1e-06 56.6 80 51.2
arahy.Tifrunner.gnm1.ann1.QPT367 Arachis hypogaea HOM05D008671 ORTHO05D010581 2.4e-06 55.5 83 50.6
Phvul.010G122900 Phaseolus vulgaris HOM05D008671 ORTHO05D010581 2.4e-06 55.5 79 46.8
Lsat_1_v5_gn_4_91660 Lactuca sativa HOM05D024111 ORTHO05D010581 3.2e-06 55.1 84 45.2
THA.LOC104812274 Tarenaya hassleriana HOM05D008786 ORTHO05D011065 7.1e-06 53.9 90 40.0
VMungo0331G0127 Vigna mungo HOM05D008671 ORTHO05D010581 9.3e-06 53.5 79 46.8


User provided reference genes

Program Settings