Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p093649 Quercus lobata HOM05D004197 ORTHO05D004975 8.7e-63 243.4 120 100.0
QL04p073242 Quercus lobata HOM05D004197 ORTHO05D004975 1.5e-54 216.1 111 94.6
CiPaw.11G096400 Carya illinoinensis HOM05D004197 ORTHO05D004975 7.2e-49 197.2 111 82.9
Lalb_Chr10g0101191 Lupinus albus HOM05D004197 ORTHO05D004975 9.4e-49 196.8 111 80.2
Cfa015042 Carpinus fangiana HOM05D004197 ORTHO05D004975 2.1e-48 195.7 111 82.0
Lalb_Chr04g0253841 Lupinus albus HOM05D004197 ORTHO05D004975 2.1e-48 195.7 111 82.0
QL10p055721 Quercus lobata HOM05D004197 ORTHO05D004975 3.6e-48 194.9 111 82.9
Prupe.1G206900 Prunus persica HOM05D004197 ORTHO05D004975 6.1e-48 194.1 111 82.0
GSVIVG01038138001 Vitis vinifera HOM05D004197 ORTHO05D004975 7.9e-48 193.7 111 82.0
CiPaw.12G066300 Carya illinoinensis HOM05D004197 ORTHO05D004975 3.0e-47 191.8 111 79.3
PGR142G4086 Punica granatum HOM05D004197 ORTHO05D004975 3.9e-47 191.4 111 79.3
Thecc.04G166300 Theobroma cacao HOM05D004197 ORTHO05D004975 5.1e-47 191.0 111 80.2
Nn1g09691 Nelumbo nucifera HOM05D004197 ORTHO05D004975 8.8e-47 190.3 111 78.4
Phvul.003G238300 Phaseolus vulgaris HOM05D004197 ORTHO05D004975 8.8e-47 190.3 111 79.3
Ciclev10022904m.g Citrus clementina HOM05D004197 ORTHO05D004975 1.1e-46 189.9 111 80.2
Hma1.2p1_0307F.1_g119895 Hydrangea macrophylla HOM05D004197 ORTHO05D004975 1.1e-46 189.9 111 79.3
Lj1g0017974 Lotus japonicus HOM05D004197 ORTHO05D004975 1.1e-46 189.9 111 77.5
Duzib151G0052 Durio zibethinus HOM05D004197 ORTHO05D004975 1.5e-46 189.5 111 79.3
Glyma.17G164900 Glycine max HOM05D004197 ORTHO05D004975 1.5e-46 189.5 111 78.4
Atru.chr12.1293 Acer truncatum HOM05D004197 ORTHO05D004975 2.0e-46 189.1 111 77.5
Rhsim03G0176800 Rhododendron simsii HOM05D004197 ORTHO05D004975 2.0e-46 189.1 111 79.3
VMungo0251G3068 Vigna mungo HOM05D004197 ORTHO05D004975 2.0e-46 189.1 111 79.3
Atru.chr4.2919 Acer truncatum HOM05D004197 ORTHO05D004975 3.3e-46 188.3 111 77.5
FvH4_7g06200 Fragaria vesca HOM05D004197 ORTHO05D004975 3.3e-46 188.3 111 81.1
Gohir.A10G143100 Gossypium hirsutum HOM05D004197 ORTHO05D004975 3.3e-46 188.3 111 78.4
Gohir.D10G123800 Gossypium hirsutum HOM05D004197 ORTHO05D004975 3.3e-46 188.3 111 78.4
Gorai.011G136700 Gossypium raimondii HOM05D004197 ORTHO05D004975 3.3e-46 188.3 111 78.4
Gorai.012G053000 Gossypium raimondii HOM05D004197 ORTHO05D004975 3.3e-46 188.3 111 78.4
Phvul.010G124900 Phaseolus vulgaris HOM05D004197 ORTHO05D004975 3.3e-46 188.3 111 78.4
Ca_10539_v3 Cicer arietinum L. HOM05D004197 ORTHO05D004975 5.7e-46 187.6 111 75.7
Gohir.D04G047600 Gossypium hirsutum HOM05D004197 ORTHO05D004975 5.7e-46 187.6 111 78.4
Ca_23424_v3 Cicer arietinum L. HOM05D004197 ORTHO05D004975 7.4e-46 187.2 111 76.6
Duzib212G0574 Durio zibethinus HOM05D004197 ORTHO05D004975 7.4e-46 187.2 111 79.3
TPR.G16667 Trifolium pratense HOM05D004197 ORTHO05D004975 7.4e-46 187.2 111 76.6
Dinv33200 Davidia involucrata HOM05D004197 ORTHO05D004975 9.7e-46 186.8 111 78.4
Eucgr.G02225 Eucalyptus grandis HOM05D004197 ORTHO05D004975 9.7e-46 186.8 111 77.5
FAN01G1948 Fragaria x ananassa HOM05D004197 ORTHO05D004975 9.7e-46 186.8 111 80.2
FAN06G1493 Fragaria x ananassa HOM05D004197 ORTHO05D004975 9.7e-46 186.8 111 80.2
Gohir.A05G367700 Gossypium hirsutum HOM05D004197 ORTHO05D004975 9.7e-46 186.8 111 77.5
Medtr8g022770 Medicago truncatula HOM05D004197 ORTHO05D004975 9.7e-46 186.8 111 76.6
TWI32G1250 Tripterygium wilfordii HOM05D004197 ORTHO05D004975 9.7e-46 186.8 111 77.5
TAR629G0957 Trochodendron aralioides HOM05D004197 ORTHO05D004975 9.7e-46 186.8 125 72.0
Glyma.05G102000 Glycine max HOM05D004197 ORTHO05D004975 1.3e-45 186.4 111 78.4
Psat1g223520 Pisum sativum HOM05D004197 ORTHO05D004975 1.3e-45 186.4 111 74.8
CSS0039414 Camellia sinensis var. sinensis HOM05D004197 ORTHO05D004975 1.7e-45 186.0 111 76.6
CSS0047181 Camellia sinensis var. sinensis HOM05D004197 ORTHO05D004975 1.7e-45 186.0 111 76.6
Cpa.g.sc10.180 Carica papaya HOM05D004197 ORTHO05D004975 1.7e-45 186.0 111 77.5
ATR0733G162 Amborella trichopoda HOM05D004197 ORTHO05D004975 2.2e-45 185.7 111 75.7
FAN03G3355 Fragaria x ananassa HOM05D004197 ORTHO05D004975 2.2e-45 185.7 111 79.3
RcHm_v2.0_Chr1g0333831 Rosa chinensis HOM05D004197 ORTHO05D004975 2.8e-45 185.3 111 78.4
EL10Ac3g06082 Beta vulgaris HOM05D004197 ORTHO05D004975 4.8e-45 184.5 111 76.6
arahy.Tifrunner.gnm1.ann1.4JR04K Arachis hypogaea HOM05D004197 ORTHO05D004975 6.3e-45 184.1 111 77.5
arahy.Tifrunner.gnm1.ann1.5DCW4K Arachis hypogaea HOM05D004197 ORTHO05D004975 6.3e-45 184.1 111 77.5
arahy.Tifrunner.gnm1.ann1.E9H45Q Arachis hypogaea HOM05D004197 ORTHO05D004975 6.3e-45 184.1 111 77.5
TAR362G0244 Trochodendron aralioides HOM05D000090 ORTHO05D001584 6.3e-45 184.1 111 77.5
Ah.13g073520 Amaranthus hybridus HOM05D004197 ORTHO05D004975 8.2e-45 183.7 111 74.8
CARHR170020 Cardamine hirsuta HOM05D004197 ORTHO05D004975 8.2e-45 183.7 111 77.5
Aa31LG10G13940 Aethionema arabicum HOM05D004197 ORTHO05D004975 1.1e-44 183.3 111 77.5
AL5G41720 Arabidopsis lyrata HOM05D004197 ORTHO05D004975 1.1e-44 183.3 111 77.5
Carub.0005s2637 Capsella rubella HOM05D004197 ORTHO05D004975 1.1e-44 183.3 111 77.5
AT3G59650 Arabidopsis thaliana HOM05D004197 ORTHO05D004975 1.4e-44 183.0 111 76.6
Psat4g166320 Pisum sativum HOM05D004197 ORTHO05D004975 1.4e-44 183.0 111 73.0
HPP92_007604 Vanilla planifolia HOM05D004197 ORTHO05D004975 1.4e-44 183.0 111 72.1
Hund04335 Selenicereus undatus HOM05D004197 ORTHO05D004975 1.8e-44 182.6 111 75.7
THA.LOC104804007 Tarenaya hassleriana HOM05D004197 ORTHO05D004975 1.8e-44 182.6 111 77.5
BcaC07g40496 Brassica carinata HOM05D004197 ORTHO05D004975 2.4e-44 182.2 111 77.5
A09p51920 Brassica napus HOM05D004197 ORTHO05D004975 2.4e-44 182.2 111 77.5
C08p34650 Brassica napus HOM05D004197 ORTHO05D004975 2.4e-44 182.2 111 77.5
BolC8t51067H Brassica oleracea HOM05D004197 ORTHO05D004975 2.4e-44 182.2 111 77.5
BraA09t40628Z Brassica rapa HOM05D004197 ORTHO05D004975 2.4e-44 182.2 111 77.5
BcaC08g44998 Brassica carinata HOM05D004197 ORTHO05D004975 3.1e-44 181.8 111 77.5
A07p24720 Brassica napus HOM05D000455 ORTHO05D000434 3.1e-44 181.8 111 77.5
C06p26290 Brassica napus HOM05D000455 ORTHO05D000434 3.1e-44 181.8 111 77.5
BolC6t37793H Brassica oleracea HOM05D004197 ORTHO05D004975 3.1e-44 181.8 111 77.5
BraA07t30117Z Brassica rapa HOM05D004197 ORTHO05D004975 3.1e-44 181.8 111 77.5
CDE02G1869 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 3.1e-44 181.8 111 75.7
Thhalv10006316m.g Eutrema salsugineum HOM05D004197 ORTHO05D004975 3.1e-44 181.8 111 77.5
Sp5g03530 Schrenkiella parvula HOM05D004197 ORTHO05D004975 3.1e-44 181.8 111 77.5
BcaB02g07455 Brassica carinata HOM05D004197 ORTHO05D004975 4.1e-44 181.4 111 77.5
Cc02_g26370 Coffea canephora HOM05D004197 ORTHO05D004975 4.1e-44 181.4 111 78.4
EL10Ac6g15364 Beta vulgaris HOM05D004197 ORTHO05D004975 5.3e-44 181.0 111 74.8
AUR62023799 Chenopodium quinoa HOM05D004197 ORTHO05D004975 5.3e-44 181.0 111 73.9
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 6.9e-44 180.6 113 74.3
FvH4_2g13530 Fragaria vesca HOM05D004197 ORTHO05D004975 9.1e-44 180.3 111 77.5
MSTRG.27564 Avicennia marina HOM05D004197 ORTHO05D004975 1.2e-43 179.9 111 78.4
MD08G1230600 Malus domestica HOM05D004197 ORTHO05D004975 1.2e-43 179.9 108 76.9
Actinidia11444 Actinidia chinensis HOM05D005056 ORTHO05D006487 1.5e-43 179.5 110 73.6
Os03g0207250 Oryza sativa ssp. japonica HOM05D004197 ORTHO05D004975 1.5e-43 179.5 111 73.9
Aqoxy7G00569 Aquilegia oxysepala HOM05D004197 ORTHO05D004975 2.0e-43 179.1 111 73.0
Cc03_g14030 Coffea canephora HOM05D004197 ORTHO05D004975 2.0e-43 179.1 111 78.4
PSO832G1844 Papaver somniferum HOM05D004197 ORTHO05D004975 2.0e-43 179.1 115 74.8
FAN24G1973 Fragaria x ananassa HOM05D004197 ORTHO05D004975 4.5e-43 177.9 110 77.3
PSO017G5565 Papaver somniferum HOM05D004197 ORTHO05D004975 2.2e-42 175.6 115 73.0
PSO675G0737 Papaver somniferum HOM05D004197 ORTHO05D004975 2.2e-42 175.6 115 73.0
Sp2g07880 Schrenkiella parvula HOM05D004197 ORTHO05D004975 2.2e-42 175.6 111 75.7
SGA_v2.0_scaffold49G18240 Striga asiatica HOM05D004197 ORTHO05D004975 2.2e-42 175.6 112 75.0
Zm00001eb400580 Zea mays HOM05D004197 ORTHO05D004975 3.8e-42 174.9 111 72.1
Oeu016610.1 Olea europaea HOM05D004197 ORTHO05D004975 5.0e-42 174.5 111 74.8
Sed0002539 Sechium edule HOM05D004197 ORTHO05D004975 6.5e-42 174.1 111 71.2
Migut.F01587 Erythranthe guttata HOM05D004197 ORTHO05D004975 8.5e-42 173.7 111 74.8
PSO591G0183 Papaver somniferum HOM05D004197 ORTHO05D004975 1.1e-41 173.3 115 72.2
ClCG07G015230 Citrullus lanatus HOM05D004197 ORTHO05D004975 1.9e-41 172.6 111 72.1
CsaV3_4G002820 Cucumis sativus L. HOM05D004197 ORTHO05D004975 1.9e-41 172.6 111 73.0
Lsat_1_v5_gn_6_33001 Lactuca sativa HOM05D004197 ORTHO05D004975 1.9e-41 172.6 111 75.7
Manes.06G021100 Manihot esculenta HOM05D004197 ORTHO05D004975 1.9e-41 172.6 111 72.1
TWI34G1638 Tripterygium wilfordii HOM05D004197 ORTHO05D004975 2.5e-41 172.2 135 64.4
CAN.G525.23 Capsicum annuum HOM05D004197 ORTHO05D004975 7.2e-41 170.6 111 73.9
MELO3C017759.2 Cucumis melo HOM05D004197 ORTHO05D004975 9.4e-41 170.2 111 72.1
HanXRQChr10g0286001 Helianthus annuus HOM05D004197 ORTHO05D004975 1.2e-40 169.9 111 74.8
SalBow6G6028 Salvia bowleyana HOM05D004197 ORTHO05D004975 1.2e-40 169.9 111 73.9
ECA240G1468 Erigeron canadensis HOM05D004197 ORTHO05D004975 1.6e-40 169.5 111 73.9
Peaxi162Scf00196g00222 Petunia axillaris HOM05D004197 ORTHO05D004975 3.6e-40 168.3 111 71.2
CANSAT80G2644 Cannabis sativa HOM05D004197 ORTHO05D004975 1.0e-39 166.8 111 71.2
Nitab4.5_0007872g0010 Nicotiana tabacum HOM05D004197 ORTHO05D004975 1.0e-39 166.8 111 71.2
ECA247G1539 Erigeron canadensis HOM05D004197 ORTHO05D004975 1.4e-39 166.4 111 73.9
Solyc04g014390.3 Solanum lycopersicum HOM05D004197 ORTHO05D004975 1.8e-39 166.0 111 72.1
Sopen04g006520 Solanum pennellii HOM05D004197 ORTHO05D004975 1.8e-39 166.0 111 72.1
TAR493G0004 Trochodendron aralioides HOM05D004197 ORTHO05D004975 2.3e-39 165.6 107 74.8
Potri.013G126200 Populus trichocarpa HOM05D004197 ORTHO05D004975 3.0e-39 165.2 111 69.4
Lsat_1_v5_gn_5_190681 Lactuca sativa HOM05D004197 ORTHO05D004975 5.1e-39 164.5 111 72.1
Nitab4.5_0000902g0310 Nicotiana tabacum HOM05D004197 ORTHO05D004975 5.1e-39 164.5 111 70.3
unitig_899.g14470 Utricularia gibba HOM05D004197 ORTHO05D004975 2.0e-38 162.5 111 68.5
PGSC0003DMG401023624 Solanum tuberosum HOM05D004197 ORTHO05D004975 2.6e-38 162.2 111 71.2
Gorai.004G083000 Gossypium raimondii HOM05D004197 ORTHO05D004975 3.8e-34 148.3 86 77.9
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 3.8e-34 148.3 86 77.9
Gohir.D08G078000 Gossypium hirsutum HOM05D004197 ORTHO05D004975 6.5e-34 147.5 84 79.8
C04p24770 Brassica napus HOM05D004197 ORTHO05D004975 8.5e-34 147.1 110 69.1
BolC4t23981H Brassica oleracea HOM05D004197 ORTHO05D004975 8.5e-34 147.1 110 69.1
arahy.Tifrunner.gnm1.ann1.XY21PC Arachis hypogaea HOM05D004197 ORTHO05D004975 1.1e-33 146.7 122 59.8
Mapoly0027s0066 Marchantia polymorpha HOM05D004197 ORTHO05D004975 3.2e-33 145.2 117 61.5
BcaC02g10824 Brassica carinata HOM05D004197 ORTHO05D004975 7.2e-33 144.1 110 68.2
Atru.chr12.1301 Acer truncatum HOM05D004197 ORTHO05D004975 2.1e-32 142.5 82 75.6
Gorai.005G151300 Gossypium raimondii HOM05D004197 ORTHO05D004975 3.6e-32 141.7 82 78.0
Atru.chr12.1273 Acer truncatum HOM05D004197 ORTHO05D004975 4.7e-32 141.4 103 65.0
Gohir.D10G075200 Gossypium hirsutum HOM05D004197 ORTHO05D004975 4.7e-32 141.4 82 78.0
AUR62002389 Chenopodium quinoa HOM05D004197 ORTHO05D004975 8.0e-32 140.6 84 75.0
SEGI_18755 Sequoiadendron giganteum HOM05D004197 ORTHO05D004975 8.0e-32 140.6 111 59.5
SHI24203 Sapria himalayana HOM05D004197 ORTHO05D004975 1.8e-31 139.4 131 52.7
Gohir.D02G135200 Gossypium hirsutum HOM05D004197 ORTHO05D004975 3.0e-31 138.7 82 76.8
Lj3g0000340 Lotus japonicus HOM05D004197 ORTHO05D004975 6.7e-31 137.5 115 60.0
Gorai.011G081000 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.5e-30 136.3 82 76.8
HanXRQChr09g0264591 Helianthus annuus HOM05D004197 ORTHO05D004975 1.5e-30 136.3 85 77.6
Pp3c1_20100 Physcomitrium patens HOM05D004197 ORTHO05D004975 2.0e-30 136.0 117 55.6
arahy.Tifrunner.gnm1.ann1.60591L Arachis hypogaea HOM05D004197 ORTHO05D004975 3.3e-30 135.2 127 59.1
Rhsim02G0084000 Rhododendron simsii HOM05D004197 ORTHO05D004975 9.7e-30 133.7 78 75.6
Zm00001eb007240 Zea mays HOM05D004197 ORTHO05D004975 2.8e-29 132.1 82 70.7
Gohir.D08G220700 Gossypium hirsutum HOM05D004197 ORTHO05D004975 3.7e-29 131.7 77 77.9
DCAR_029674 Daucus carota HOM05D004197 ORTHO05D004975 5.3e-28 127.9 82 73.2
Peaxi162Scf00474g00723 Petunia axillaris HOM05D004197 ORTHO05D004975 9.1e-28 127.1 111 58.6
DCAR_009572 Daucus carota HOM05D004197 ORTHO05D004975 2.6e-27 125.6 82 72.0
CARHR099320 Cardamine hirsuta HOM05D004197 ORTHO05D004975 1.0e-26 123.6 73 75.3
unitig_736.g22525 Utricularia gibba HOM05D000398 ORTHO05D000551 1.0e-26 123.6 86 65.1
SalBow2G3321 Salvia bowleyana HOM05D004197 ORTHO05D004975 1.7e-26 122.9 82 72.0
TPR.G31074 Trifolium pratense HOM05D004197 ORTHO05D006502 5.0e-26 121.3 86 62.8
Sabra13G0105500 Salix brachista HOM05D004197 ORTHO05D004975 4.2e-25 118.2 160 44.4
vmacro16589 Vaccinium macrocarpon HOM05D004197 ORTHO05D004975 2.0e-22 109.4 62 80.6
COL.COLO4_08144 Corchorus olitorius HOM05D004197 ORTHO05D004975 1.3e-21 106.7 62 79.0
Hma1.2p1_0150F.1_g066800 Hydrangea macrophylla HOM05D004197 ORTHO05D004975 1.7e-21 106.3 62 77.4
Lsat_1_v5_gn_6_23540 Lactuca sativa HOM05D004197 ORTHO05D004975 1.7e-21 106.3 95 58.9
SMO347G0376 Selaginella moellendorffii HOM05D004197 ORTHO05D004975 2.8e-21 105.5 117 41.9
arahy.Tifrunner.gnm1.ann1.GGUP18 Arachis hypogaea HOM05D004197 ORTHO05D004975 3.1e-20 102.1 62 74.2
Glyma.07G044001 Glycine max HOM05D004197 ORTHO05D004975 2.9e-18 95.5 82 61.0
Cre06.g270650 Chlamydomonas reinhardtii HOM05D004197 ORTHO05D004975 8.5e-18 94.0 105 42.9
arahy.Tifrunner.gnm1.ann1.HJ8Q1I Arachis hypogaea HOM05D004197 ORTHO05D004975 8.0e-16 87.4 57 68.4
MCO09G643 Micromonas commoda HOM05D004197 ORTHO05D004975 8.0e-16 87.4 119 37.8
Lsat_1_v5_gn_2_131080 Lactuca sativa HOM05D004197 ORTHO05D004975 1.0e-15 87.0 82 58.5
Gorai.004G076200 Gossypium raimondii HOM05D004197 ORTHO05D004975 2.6e-14 82.4 111 43.2
Gohir.D04G172540 Gossypium hirsutum HOM05D004197 ORTHO05D004975 5.7e-14 81.3 57 68.4
Gorai.004G234500 Gossypium raimondii HOM05D004197 ORTHO05D004975 7.5e-14 80.9 57 66.7
Gorai.012G161800 Gossypium raimondii HOM05D004197 ORTHO05D004975 2.8e-13 79.0 57 66.7
Actinidia27110 Actinidia chinensis HOM05D004197 ORTHO05D004975 2.9e-10 68.9 44 70.5


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