Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p091545 Quercus lobata HOM05D000046 ORTHO05D004973 4.4e-112 407.9 196 100.0
QL04p092929 Quercus lobata HOM05D000046 ORTHO05D004973 8.6e-76 287.3 222 70.3
QL04p090644 Quercus lobata HOM05D000085 ORTHO05D004973 1.6e-34 150.2 71 95.8
QL04p090651 Quercus lobata HOM05D000046 ORTHO05D004973 1.1e-19 100.9 89 65.2
Dinv02612 Davidia involucrata HOM05D000046 ORTHO05D004973 1.2e-16 90.9 192 34.9
Dinv03407 Davidia involucrata HOM05D000046 ORTHO05D004973 5.0e-15 85.5 193 33.2
QL05p045185 Quercus lobata HOM05D000134 ORTHO05D004973 3.2e-14 82.8 214 33.2
Dinv04924 Davidia involucrata HOM05D000046 ORTHO05D004973 5.5e-14 82.0 194 33.5
QL05p048966 Quercus lobata HOM05D000046 ORTHO05D004973 7.2e-14 81.6 220 32.7
QL05p060683 Quercus lobata HOM05D000134 ORTHO05D004973 7.2e-14 81.6 215 34.0
QL05p048977 Quercus lobata HOM05D000046 ORTHO05D004973 1.2e-13 80.9 218 32.6
PGR142G1475 Punica granatum HOM05D000046 ORTHO05D004973 4.6e-13 79.0 191 32.5
PGSC0003DMG400005129 Solanum tuberosum HOM05D000046 ORTHO05D004973 3.0e-12 76.3 182 29.1
TWI32G0062 Tripterygium wilfordii HOM05D000134 ORTHO05D004973 5.1e-12 75.5 190 32.6
TWI32G0959 Tripterygium wilfordii HOM05D000046 ORTHO05D004973 2.0e-11 73.6 190 32.6
PGSC0003DMG400005128 Solanum tuberosum HOM05D000046 ORTHO05D004973 2.5e-11 73.2 200 27.5
Nitab4.5_0001773g0020 Nicotiana tabacum HOM05D000046 ORTHO05D004973 3.3e-11 72.8 167 31.7
Hma1.2p1_1718F.1_g299190 Hydrangea macrophylla HOM05D000046 ORTHO05D004973 5.7e-11 72.0 186 28.5
Dinv00588 Davidia involucrata HOM05D000046 ORTHO05D004973 9.7e-11 71.2 188 31.4
Dinv24872 Davidia involucrata HOM05D000046 ORTHO05D004973 1.7e-10 70.5 164 29.9
Hma1.2p1_1500F.1_g287300 Hydrangea macrophylla HOM05D000046 ORTHO05D004973 1.7e-10 70.5 186 28.0
Sopen01g049150 Solanum pennellii HOM05D000046 ORTHO05D004973 1.7e-10 70.5 174 31.6
Peaxi162Scf00299g00044 Petunia axillaris HOM05D000046 ORTHO05D004973 2.2e-10 70.1 187 28.9
Dinv16010 Davidia involucrata HOM05D000046 ORTHO05D004973 3.7e-10 69.3 183 30.1
Hma1.2p1_1718F.1_g299160 Hydrangea macrophylla HOM05D000046 ORTHO05D004973 3.7e-10 69.3 191 30.4
Peaxi162Scf00299g00421 Petunia axillaris HOM05D000046 ORTHO05D004973 3.7e-10 69.3 179 29.1
Rhsim01G0103100 Rhododendron simsii HOM05D000046 ORTHO05D004973 3.7e-10 69.3 194 29.9
QL03p027553 Quercus lobata HOM05D000046 ORTHO05D004973 4.8e-10 68.9 178 30.3
QL07p011918 Quercus lobata HOM05D000046 ORTHO05D004973 4.8e-10 68.9 182 31.9
Hma1.2p1_1500F.1_g287320 Hydrangea macrophylla HOM05D000046 ORTHO05D004973 6.3e-10 68.6 191 29.8
Solyc01g106870.4 Solanum lycopersicum HOM05D000046 ORTHO05D004973 6.3e-10 68.6 174 31.6
Rhsim01G0103400 Rhododendron simsii HOM05D000046 ORTHO05D004973 1.4e-09 67.4 188 30.9
Solyc01g106055.1 Solanum lycopersicum HOM05D000046 ORTHO05D004973 2.4e-09 66.6 180 27.8
Dinv08386 Davidia involucrata HOM05D001277 ORTHO05D004973 4.1e-09 65.9 189 31.2
Sopen01g048440 Solanum pennellii HOM05D000046 ORTHO05D004973 4.1e-09 65.9 178 29.2
Lju414C5G9 Lonicera japonica HOM05D000046 ORTHO05D004973 5.3e-09 65.5 182 26.9
PGR142G1886 Punica granatum HOM05D000046 ORTHO05D004973 6.9e-09 65.1 230 28.3
Dinv04935 Davidia involucrata HOM05D000046 ORTHO05D004973 1.5e-08 63.9 205 28.3
FAN17G1565 Fragaria x ananassa HOM05D000046 ORTHO05D004973 1.5e-08 63.9 171 28.7
Nitab4.5_0001773g0010 Nicotiana tabacum HOM05D000046 ORTHO05D004973 1.5e-08 63.9 171 28.1
TWI18G0530 Tripterygium wilfordii HOM05D047654 ORTHO05D004973 1.5e-08 63.9 210 30.5
DCAR_010241 Daucus carota HOM05D000046 ORTHO05D004973 2.0e-08 63.5 176 26.7
Lj2A703T54 Lonicera japonica HOM05D000046 ORTHO05D004973 2.6e-08 63.2 175 27.4
CARHR224380 Cardamine hirsuta HOM05D000046 ORTHO05D000667 3.4e-08 62.8 183 30.1
Cc06_g23630 Coffea canephora HOM05D000046 ORTHO05D004973 3.4e-08 62.8 194 29.4
Rhsim04G0076400 Rhododendron simsii HOM05D000046 ORTHO05D018099 4.5e-08 62.4 180 27.8
MD14G1034800 Malus domestica HOM05D000038 ORTHO05D000689 5.9e-08 62.0 177 30.5
COL.COLO4_20415 Corchorus olitorius HOM05D000046 ORTHO05D004973 7.7e-08 61.6 178 28.7
Medtr7g058830 Medicago truncatula HOM05D000038 ORTHO05D000612 7.7e-08 61.6 182 29.1
Lj3A585G41 Lonicera japonica HOM05D000046 ORTHO05D004973 1.0e-07 61.2 179 27.4
Lj2A707T13 Lonicera japonica HOM05D000046 ORTHO05D004973 1.3e-07 60.8 176 27.8
Migut.M00174 Erythranthe guttata HOM05D000046 ORTHO05D004973 2.9e-07 59.7 194 27.8
FAN07G0274 Fragaria x ananassa HOM05D000046 ORTHO05D004973 2.9e-07 59.7 184 29.3
Lj3A586G10 Lonicera japonica HOM05D000046 ORTHO05D004973 2.9e-07 59.7 180 27.8
vmacro11212 Vaccinium macrocarpon HOM05D000046 ORTHO05D004973 2.9e-07 59.7 96 37.5
Dinv04931 Davidia involucrata HOM05D000046 ORTHO05D004973 3.8e-07 59.3 208 28.4
Gohir.A01G063300 Gossypium hirsutum HOM05D000038 ORTHO05D000689 3.8e-07 59.3 175 26.9
Gohir.D01G049700 Gossypium hirsutum HOM05D000038 ORTHO05D000689 3.8e-07 59.3 175 26.9
Gorai.002G069600 Gossypium raimondii HOM05D000038 ORTHO05D000689 3.8e-07 59.3 175 26.9
Sc16g0007020 Simmondsia chinensis HOM05D000038 ORTHO05D000689 3.8e-07 59.3 175 28.0
Migut.M00369 Erythranthe guttata HOM05D000038 ORTHO05D000689 5.0e-07 58.9 178 27.0
Glyma.08G355100 Glycine max HOM05D000038 ORTHO05D000612 6.5e-07 58.5 186 28.0
Lsat_1_v5_gn_5_170480 Lactuca sativa HOM05D000046 ORTHO05D000667 6.5e-07 58.5 183 29.5
MD12G1033500 Malus domestica HOM05D000038 ORTHO05D000689 6.5e-07 58.5 179 29.1
MD13G1120500 Malus domestica HOM05D000046 ORTHO05D004973 6.5e-07 58.5 180 26.7
Phvul.008G124800 Phaseolus vulgaris HOM05D000038 ORTHO05D000612 6.5e-07 58.5 179 27.9
Psat5g041320 Pisum sativum HOM05D000038 ORTHO05D000612 6.5e-07 58.5 192 27.1
Prupe.1G429800 Prunus persica HOM05D000038 ORTHO05D000612 6.5e-07 58.5 179 28.5
Sc21g0002150 Simmondsia chinensis HOM05D000038 ORTHO05D000689 6.5e-07 58.5 183 27.3
VMungo1127G0525 Vigna mungo HOM05D000038 ORTHO05D000689 6.5e-07 58.5 178 28.7
VMungo1383G0096 Vigna mungo HOM05D000038 ORTHO05D000612 6.5e-07 58.5 187 28.3
FvH4_4g23630 Fragaria vesca HOM05D000046 ORTHO05D004973 8.5e-07 58.2 178 26.4
FAN12G1200 Fragaria x ananassa HOM05D000046 ORTHO05D004973 8.5e-07 58.2 178 26.4
Hma1.2p1_1198F.1_g266290 Hydrangea macrophylla HOM05D000046 ORTHO05D004973 8.5e-07 58.2 202 30.7
PSO151G0071 Papaver somniferum HOM05D000031 ORTHO05D000030 8.5e-07 58.2 189 24.3
CSS0009187 Camellia sinensis var. sinensis HOM05D000038 ORTHO05D000689 1.1e-06 57.8 179 28.5
Ca_01553_v3 Cicer arietinum L. HOM05D000038 ORTHO05D000689 1.1e-06 57.8 183 27.9
Duzib268G0974 Durio zibethinus HOM05D000038 ORTHO05D000689 1.1e-06 57.8 177 26.6
RhsimUnG0166500 Rhododendron simsii HOM05D000046 ORTHO05D018099 1.1e-06 57.8 180 26.7
Aa31LG6G410 Aethionema arabicum HOM05D000046 ORTHO05D000667 1.4e-06 57.4 182 27.5
arahy.Tifrunner.gnm1.ann1.AUSP9T Arachis hypogaea HOM05D000038 ORTHO05D000689 1.4e-06 57.4 183 27.3
CSS0001511 Camellia sinensis var. sinensis HOM05D000038 ORTHO05D000689 1.4e-06 57.4 181 27.6
CSS0006040 Camellia sinensis var. sinensis HOM05D000038 ORTHO05D000689 1.4e-06 57.4 180 27.2
CSS0008527 Camellia sinensis var. sinensis HOM05D000038 ORTHO05D000689 1.4e-06 57.4 180 27.2
Duzib213G0568 Durio zibethinus HOM05D000038 ORTHO05D000689 1.4e-06 57.4 176 26.1
Glyma.12G198800 Glycine max HOM05D000038 ORTHO05D000689 1.4e-06 57.4 183 27.3
Lj3g0010627 Lotus japonicus HOM05D000038 ORTHO05D000689 1.4e-06 57.4 178 27.5
Psat5g040520 Pisum sativum HOM05D000038 ORTHO05D000612 1.4e-06 57.4 189 27.0
TPR.G30082 Trifolium pratense HOM05D000038 ORTHO05D000689 1.4e-06 57.4 178 28.7
GSVIVG01014328001 Vitis vinifera HOM05D000038 ORTHO05D000689 1.4e-06 57.4 183 25.1
CiPaw.13G032300 Carya illinoinensis HOM05D000046 ORTHO05D004973 1.9e-06 57.0 186 26.9
PSO339G6137 Papaver somniferum HOM05D000031 ORTHO05D000030 1.9e-06 57.0 198 23.2
Prupe.1G224700 Prunus persica HOM05D000046 ORTHO05D004973 1.9e-06 57.0 189 27.5
RcHm_v2.0_Chr4g0430091 Rosa chinensis HOM05D000046 ORTHO05D004973 1.9e-06 57.0 178 29.2
Ah.01g015240 Amaranthus hybridus HOM05D000038 ORTHO05D000689 2.5e-06 56.6 181 25.4
CSS0015404 Camellia sinensis var. sinensis HOM05D000038 ORTHO05D009868 2.5e-06 56.6 177 27.7
CSS0039385 Camellia sinensis var. sinensis HOM05D000038 ORTHO05D000689 2.5e-06 56.6 179 27.4
Cc05_g05720 Coffea canephora HOM05D000038 ORTHO05D000689 2.5e-06 56.6 181 25.4
Haze_13035 Corylus avellana HOM05D000038 ORTHO05D000689 2.5e-06 56.6 181 26.5
PSO151G0047 Papaver somniferum HOM05D000031 ORTHO05D000030 2.5e-06 56.6 200 23.0
PGR102G1244 Punica granatum HOM05D000038 ORTHO05D000423 2.5e-06 56.6 193 23.8
Sp7g16480 Schrenkiella parvula HOM05D000046 ORTHO05D000667 2.5e-06 56.6 192 28.1
Thecc.02G167400 Theobroma cacao HOM05D000038 ORTHO05D000689 2.5e-06 56.6 183 27.9
EL10Ac9g20765 Beta vulgaris HOM05D000038 ORTHO05D000689 3.2e-06 56.2 184 25.0
CSS0017784 Camellia sinensis var. sinensis HOM05D000038 ORTHO05D000689 3.2e-06 56.2 179 28.5
CSS0022758 Camellia sinensis var. sinensis HOM05D000038 ORTHO05D000689 3.2e-06 56.2 180 27.2
CSS0028738 Camellia sinensis var. sinensis HOM05D000038 ORTHO05D000689 3.2e-06 56.2 181 25.4
CANSAT64G2175 Cannabis sativa HOM05D000038 ORTHO05D000689 3.2e-06 56.2 185 26.5
CiPaw.05G256400 Carya illinoinensis HOM05D000072 ORTHO05D000026 3.2e-06 56.2 186 26.9
Ciclev10014278m.g Citrus clementina HOM05D000038 ORTHO05D000689 3.2e-06 56.2 183 25.7
Dinv19543 Davidia involucrata HOM05D000046 ORTHO05D004973 3.2e-06 56.2 180 27.8
Eucgr.E00508 Eucalyptus grandis HOM05D000038 ORTHO05D000689 3.2e-06 56.2 181 27.6
Psat7g202800 Pisum sativum HOM05D000038 ORTHO05D000689 3.2e-06 56.2 178 28.1
CSS0002283 Camellia sinensis var. sinensis HOM05D000038 ORTHO05D000689 4.2e-06 55.8 180 28.9
CSS0017310 Camellia sinensis var. sinensis HOM05D000038 ORTHO05D000689 4.2e-06 55.8 179 26.8
Haze_13039 Corylus avellana HOM05D000038 ORTHO05D000689 4.2e-06 55.8 178 27.0
DCAR_002164 Daucus carota HOM05D000038 ORTHO05D000689 4.2e-06 55.8 178 28.1
FvH4_6g26420 Fragaria vesca HOM05D000038 ORTHO05D000689 4.2e-06 55.8 178 28.1
FvH4_6g26450 Fragaria vesca HOM05D000038 ORTHO05D000689 4.2e-06 55.8 181 26.0
FAN14G2049 Fragaria x ananassa HOM05D000038 ORTHO05D000689 4.2e-06 55.8 181 26.5
FAN14G2147 Fragaria x ananassa HOM05D000038 ORTHO05D000689 4.2e-06 55.8 181 26.0
Gohir.D02G184800 Gossypium hirsutum HOM05D000038 ORTHO05D000689 4.2e-06 55.8 183 27.9
Gorai.005G207100 Gossypium raimondii HOM05D000038 ORTHO05D000689 4.2e-06 55.8 183 27.9
HanXRQChr13g0406171 Helianthus annuus HOM05D000038 ORTHO05D000612 4.2e-06 55.8 179 27.9
Hund15992 Selenicereus undatus HOM05D000166 ORTHO05D000812 4.2e-06 55.8 174 28.7
DCAR_002163 Daucus carota HOM05D000038 ORTHO05D000689 5.5e-06 55.5 183 26.8
Duzib132G1067 Durio zibethinus HOM05D000046 ORTHO05D004973 5.5e-06 55.5 46 58.7
Duzib192G0815 Durio zibethinus HOM05D000038 ORTHO05D000423 5.5e-06 55.5 175 26.3
FvH4_6g26451 Fragaria vesca HOM05D000038 ORTHO05D000689 5.5e-06 55.5 181 27.1
FAN02G1625 Fragaria x ananassa HOM05D000038 ORTHO05D000689 5.5e-06 55.5 178 28.1
FAN05G2608 Fragaria x ananassa HOM05D000038 ORTHO05D000689 5.5e-06 55.5 178 28.1
FAN09G2569 Fragaria x ananassa HOM05D000038 ORTHO05D000689 5.5e-06 55.5 178 28.1
Glyma.06G300600 Glycine max HOM05D000038 ORTHO05D000689 5.5e-06 55.5 178 28.1
Gohir.A03G161500 Gossypium hirsutum HOM05D000038 ORTHO05D000689 5.5e-06 55.5 183 27.9
Lsat_1_v5_gn_6_110661 Lactuca sativa HOM05D000038 ORTHO05D000612 5.5e-06 55.5 190 27.9
Nitab4.5_0010290g0010 Nicotiana tabacum HOM05D000038 ORTHO05D000689 5.5e-06 55.5 183 25.7
Prupe.1G429900 Prunus persica HOM05D000038 ORTHO05D000612 5.5e-06 55.5 184 27.7
PGR042G0040 Punica granatum HOM05D000038 ORTHO05D000689 5.5e-06 55.5 181 26.0
PGR042G0775 Punica granatum HOM05D000038 ORTHO05D000689 5.5e-06 55.5 181 26.0
Thecc.07G090100 Theobroma cacao HOM05D000038 ORTHO05D000689 5.5e-06 55.5 177 24.3
CSS0030882 Camellia sinensis var. sinensis HOM05D000038 ORTHO05D000689 7.2e-06 55.1 178 27.5
Cc10_g05160 Coffea canephora HOM05D000038 ORTHO05D000612 7.2e-06 55.1 161 29.2
DCAR_002165 Daucus carota HOM05D000038 ORTHO05D000689 7.2e-06 55.1 183 26.8
Glyma.12G104100 Glycine max HOM05D000038 ORTHO05D000689 7.2e-06 55.1 178 28.1
Phvul.005G110400 Phaseolus vulgaris HOM05D000038 ORTHO05D000689 7.2e-06 55.1 180 28.3
Phvul.008G124900 Phaseolus vulgaris HOM05D000038 ORTHO05D000612 7.2e-06 55.1 185 27.6
PGSC0003DMG400042814 Solanum tuberosum HOM05D000038 ORTHO05D000689 7.2e-06 55.1 183 25.1
TPR.G30070 Trifolium pratense HOM05D000038 ORTHO05D000689 7.2e-06 55.1 177 27.7
TWI18G0179 Tripterygium wilfordii HOM05D000038 ORTHO05D000689 7.2e-06 55.1 183 25.7
Atru.chr6.2979 Acer truncatum HOM05D000038 ORTHO05D000689 9.4e-06 54.7 179 28.5
EL10Ac6g13696 Beta vulgaris HOM05D000038 ORTHO05D000612 9.4e-06 54.7 182 29.1
CSS0007750 Camellia sinensis var. sinensis HOM05D000038 ORTHO05D000689 9.4e-06 54.7 181 25.4
Lj3g0007077 Lotus japonicus HOM05D000038 ORTHO05D000689 9.4e-06 54.7 178 28.7
Nitab4.5_0000945g0010 Nicotiana tabacum HOM05D000038 ORTHO05D000689 9.4e-06 54.7 183 25.1
Psat5g267480 Pisum sativum HOM05D000038 ORTHO05D000689 9.4e-06 54.7 180 27.8
QL01p011536 Quercus lobata HOM05D000031 ORTHO05D000030 9.4e-06 54.7 180 26.1
Solyc07g053220.2 Solanum lycopersicum HOM05D000038 ORTHO05D000689 9.4e-06 54.7 183 25.1
TPR.G18078 Trifolium pratense HOM05D000038 ORTHO05D009868 9.4e-06 54.7 166 28.9
TWI77G0965 Tripterygium wilfordii HOM05D000033 ORTHO05D002478 9.4e-06 54.7 189 27.5


User provided reference genes

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