Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p089868 Quercus lobata HOM05D006002 ORTHO05D007651 1.3e-76 289.7 145 100.0
QL11p042198 Quercus lobata HOM05D000011 ORTHO05D000018 6.2e-31 137.9 70 97.1
QL11p018632 Quercus lobata HOM05D000396 ORTHO05D001816 8.1e-31 137.5 76 90.8
QL11p041479 Quercus lobata HOM05D004755 ORTHO05D006137 5.3e-30 134.8 69 95.7
QL09p021925 Quercus lobata HOM05D000132 ORTHO05D000058 2.4e-27 125.9 63 96.8
QL03p043192 Quercus lobata HOM05D006002 ORTHO05D007651 4.3e-24 115.2 60 91.7
QL04p088541 Quercus lobata HOM05D006002 ORTHO05D007651 4.3e-24 115.2 71 77.5
QL04p089617 Quercus lobata HOM05D002182 ORTHO05D004671 7.4e-24 114.4 60 90.0
QL04p088993 Quercus lobata HOM05D006002 ORTHO05D007651 2.1e-23 112.8 65 83.1
Sabra03G0164800 Salix brachista HOM05D006002 ORTHO05D007651 4.8e-23 111.7 71 74.6
Potri.003G221400 Populus trichocarpa HOM05D006002 ORTHO05D007651 1.4e-22 110.2 71 73.2
Haze_07820 Corylus avellana HOM05D006002 ORTHO05D007651 3.1e-22 109.0 71 71.8
Cpa.g.sc42.82 Carica papaya HOM05D006002 ORTHO05D007651 6.9e-22 107.8 71 73.2
Glyma.15G260100 Glycine max HOM05D006002 ORTHO05D007651 9.0e-22 107.5 71 70.4
Eucgr.F01438 Eucalyptus grandis HOM05D006002 ORTHO05D007651 2.0e-21 106.3 65 75.4
MD10G1197800 Malus domestica HOM05D006002 ORTHO05D007651 3.4e-21 105.5 71 69.0
Eucgr.F01442 Eucalyptus grandis HOM05D006002 ORTHO05D007651 4.5e-21 105.1 65 75.4
Manes.03G102600 Manihot esculenta HOM05D006002 ORTHO05D007651 4.5e-21 105.1 71 67.6
Phvul.005G050900 Phaseolus vulgaris HOM05D006002 ORTHO05D007651 4.5e-21 105.1 71 70.4
Psat3g026200 Pisum sativum HOM05D006002 ORTHO05D007651 4.5e-21 105.1 71 67.6
Prupe.4G144100 Prunus persica HOM05D006002 ORTHO05D007651 4.5e-21 105.1 71 67.6
CANSAT56G1259 Cannabis sativa HOM05D006002 ORTHO05D007651 5.8e-21 104.8 71 69.0
GSVIVG01020461001 Vitis vinifera HOM05D006002 ORTHO05D007651 5.8e-21 104.8 71 69.0
Dinv42524 Davidia involucrata HOM05D006002 ORTHO05D007651 7.6e-21 104.4 71 70.4
RcHm_v2.0_Chr5g0027061 Rosa chinensis HOM05D006002 ORTHO05D007651 7.6e-21 104.4 71 69.0
VMungo1080G0998 Vigna mungo HOM05D001395 ORTHO05D002039 7.6e-21 104.4 71 67.6
Ciclev10020646m.g Citrus clementina HOM05D006002 ORTHO05D007651 1.0e-20 104.0 71 66.2
Glyma.08G167200 Glycine max HOM05D006002 ORTHO05D007651 1.0e-20 104.0 65 73.8
Lj3g0018048 Lotus japonicus HOM05D006002 ORTHO05D007651 1.0e-20 104.0 71 67.6
QL03p043202 Quercus lobata HOM05D006002 ORTHO05D007651 1.0e-20 104.0 71 70.4
CSS0008604 Camellia sinensis var. sinensis HOM05D006002 ORTHO05D007651 1.3e-20 103.6 103 56.3
CiPaw.11G062100 Carya illinoinensis HOM05D006002 ORTHO05D007651 1.3e-20 103.6 65 73.8
arahy.Tifrunner.gnm1.ann1.0RH0I3 Arachis hypogaea HOM05D006002 ORTHO05D007651 2.2e-20 102.8 65 69.2
arahy.Tifrunner.gnm1.ann1.HWL53Q Arachis hypogaea HOM05D006002 ORTHO05D007651 2.2e-20 102.8 65 69.2
Lalb_Chr25g0284701 Lupinus albus HOM05D006002 ORTHO05D007651 2.2e-20 102.8 71 66.2
Actinidia37107 Actinidia chinensis HOM05D006002 ORTHO05D007651 3.8e-20 102.1 65 70.8
Nn3g20175 Nelumbo nucifera HOM05D006002 ORTHO05D007651 3.8e-20 102.1 65 73.8
vmacro09790 Vaccinium macrocarpon HOM05D006002 ORTHO05D007651 4.9e-20 101.7 65 72.3
MELO3C010553.2 Cucumis melo HOM05D006002 ORTHO05D007651 6.5e-20 101.3 61 72.1
TAR627G1081 Trochodendron aralioides HOM05D006002 ORTHO05D007651 6.5e-20 101.3 71 69.0
Rhsim04G0006400 Rhododendron simsii HOM05D006002 ORTHO05D007651 8.4e-20 100.9 65 70.8
FvH4_3g16091 Fragaria vesca HOM05D006002 ORTHO05D007651 1.4e-19 100.1 65 72.3
FAN11G0453 Fragaria x ananassa HOM05D006002 ORTHO05D007651 1.4e-19 100.1 65 72.3
Hma1.2p1_0193F.1_g084460 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 1.4e-19 100.1 65 69.2
Hma1.2p1_0193F.1_g084470 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 1.4e-19 100.1 65 69.2
PSO675G3741 Papaver somniferum HOM05D006002 ORTHO05D007651 1.4e-19 100.1 65 72.3
AT5G64150 Arabidopsis thaliana HOM05D006002 ORTHO05D007651 2.5e-19 99.4 71 62.0
Medtr7g107330 Medicago truncatula HOM05D006002 ORTHO05D007651 2.5e-19 99.4 71 64.8
TWI53G1943 Tripterygium wilfordii HOM05D006002 ORTHO05D007651 2.5e-19 99.4 71 67.6
ClCG11G016270 Citrullus lanatus HOM05D006002 ORTHO05D007651 3.2e-19 99.0 59 74.6
PSO541G1619 Papaver somniferum HOM05D006002 ORTHO05D007651 3.2e-19 99.0 64 70.3
Peaxi162Scf00232g00102 Petunia axillaris HOM05D006002 ORTHO05D007651 3.2e-19 99.0 65 67.7
Cc05_g15870 Coffea canephora HOM05D006002 ORTHO05D007651 4.2e-19 98.6 65 69.2
FAN16G0275 Fragaria x ananassa HOM05D006002 ORTHO05D007651 4.2e-19 98.6 65 70.8
SGA_v2.0_scaffold7G03564 Striga asiatica HOM05D006002 ORTHO05D007651 4.2e-19 98.6 93 57.0
THA.LOC104819332 Tarenaya hassleriana HOM05D006002 ORTHO05D007651 4.2e-19 98.6 71 64.8
TPR.G32276 Trifolium pratense HOM05D006002 ORTHO05D007651 4.2e-19 98.6 71 63.4
Nitab4.5_0001235g0050 Nicotiana tabacum HOM05D006002 ORTHO05D007651 5.5e-19 98.2 75 60.0
Sp2g27210 Schrenkiella parvula HOM05D006002 ORTHO05D007651 5.5e-19 98.2 71 64.8
CARHR278060 Cardamine hirsuta HOM05D006002 ORTHO05D007651 7.1e-19 97.8 71 63.4
Migut.M01570 Erythranthe guttata HOM05D006002 ORTHO05D007651 7.1e-19 97.8 59 76.3
Aa31LG1G17780 Aethionema arabicum HOM05D006002 ORTHO05D007651 9.3e-19 97.4 71 63.4
Thhalv10004403m.g Eutrema salsugineum HOM05D006002 ORTHO05D007651 9.3e-19 97.4 71 63.4
MD05G1214000 Malus domestica HOM05D006002 ORTHO05D007651 9.3e-19 97.4 60 73.3
PGR083G2675 Punica granatum HOM05D006002 ORTHO05D007651 9.3e-19 97.4 65 66.2
Carub.0008s2494 Capsella rubella HOM05D006002 ORTHO05D007651 1.2e-18 97.1 71 62.0
CAN.G943.23 Capsicum annuum HOM05D006002 ORTHO05D007651 1.2e-18 97.1 65 66.2
Ca_09098_v3 Cicer arietinum L. HOM05D006002 ORTHO05D007651 1.2e-18 97.1 71 63.4
ECA236G2913 Erigeron canadensis HOM05D006002 ORTHO05D007651 1.2e-18 97.1 59 78.0
FAN25G3512 Fragaria x ananassa HOM05D006002 ORTHO05D007651 1.2e-18 97.1 65 70.8
Sopen07g034460 Solanum pennellii HOM05D006002 ORTHO05D007651 1.2e-18 97.1 65 66.2
A06p30870 Brassica napus HOM05D006002 ORTHO05D007651 2.1e-18 96.3 71 63.4
CsaV3_2G022200 Cucumis sativus L. HOM05D006002 ORTHO05D007651 2.7e-18 95.9 59 72.9
HanXRQChr11g0335201 Helianthus annuus HOM05D006002 ORTHO05D007651 2.7e-18 95.9 68 69.1
MBI02_g43301_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 2.7e-18 95.9 65 67.7
Solyc07g066280.3 Solanum lycopersicum HOM05D006002 ORTHO05D007651 2.7e-18 95.9 65 64.6
Sed0002243 Sechium edule HOM05D006002 ORTHO05D007651 3.5e-18 95.5 59 69.5
PGSC0003DMG400022243 Solanum tuberosum HOM05D006002 ORTHO05D007651 3.5e-18 95.5 65 64.6
AL8G41420 Arabidopsis lyrata HOM05D006002 ORTHO05D007651 4.6e-18 95.1 71 60.6
BcaC01g02672 Brassica carinata HOM05D006002 ORTHO05D007651 4.6e-18 95.1 71 62.0
C03p62100 Brassica napus HOM05D006002 ORTHO05D007651 4.6e-18 95.1 71 62.0
BolC3t18471H Brassica oleracea HOM05D006002 ORTHO05D007651 4.6e-18 95.1 71 62.0
BraA06t26026Z Brassica rapa HOM05D006002 ORTHO05D007651 4.6e-18 95.1 71 62.0
CDE02G2905 Ceratophyllum demersum HOM05D006002 ORTHO05D007651 4.6e-18 95.1 66 66.7
MBI02_g20986_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 4.6e-18 95.1 59 74.6
MSTRG.16122 Avicennia marina HOM05D006002 ORTHO05D007651 6.0e-18 94.7 137 45.3
Lsat_1_v5_gn_7_116060 Lactuca sativa HOM05D006002 ORTHO05D007651 7.9e-18 94.4 58 77.6
Ah.04g163380 Amaranthus hybridus HOM05D006002 ORTHO05D007651 1.0e-17 94.0 71 59.2
EL10Ac4g08518 Beta vulgaris HOM05D006002 ORTHO05D007651 1.0e-17 94.0 65 63.1
Nitab4.5_0000294g0110 Nicotiana tabacum HOM05D006002 ORTHO05D007651 1.0e-17 94.0 65 63.1
Hund02296 Selenicereus undatus HOM05D006002 ORTHO05D007651 1.0e-17 94.0 71 60.6
BcaB02g09782 Brassica carinata HOM05D006002 ORTHO05D007651 1.3e-17 93.6 71 62.0
Lj8A185G55 Lonicera japonica HOM05D006002 ORTHO05D007651 1.3e-17 93.6 65 69.2
Aqoxy1G01586 Aquilegia oxysepala HOM05D006002 ORTHO05D007651 2.3e-17 92.8 65 64.6
Sc03g0007860 Simmondsia chinensis HOM05D006002 ORTHO05D007651 2.3e-17 92.8 71 63.4
AUR62041934 Chenopodium quinoa HOM05D006002 ORTHO05D007651 5.1e-17 91.7 66 65.2
SalBow8G1862 Salvia bowleyana HOM05D006002 ORTHO05D007651 5.1e-17 91.7 59 72.9
Os12g0612500 Oryza sativa ssp. japonica HOM05D006002 ORTHO05D007651 6.7e-17 91.3 68 57.4
QL11p020175 Quercus lobata HOM05D011350 ORTHO05D000370 6.7e-17 91.3 50 92.0
COL.COLO4_25103 Corchorus olitorius HOM05D006002 ORTHO05D007651 1.1e-16 90.5 71 59.2
AUR62035491 Chenopodium quinoa HOM05D006002 ORTHO05D007651 1.5e-16 90.1 66 65.2
Zm00001eb031660 Zea mays HOM05D006002 ORTHO05D007651 1.5e-16 90.1 68 55.9
Duzib168G0541 Durio zibethinus HOM05D006002 ORTHO05D007651 1.9e-16 89.7 65 61.5
HPP92_001894 Vanilla planifolia HOM05D006002 ORTHO05D004222 1.9e-16 89.7 65 64.6
Gohir.1Z049302 Gossypium hirsutum HOM05D006002 ORTHO05D007651 2.5e-16 89.4 65 63.1
Gohir.D05G078800 Gossypium hirsutum HOM05D006002 ORTHO05D007651 2.5e-16 89.4 65 63.1
Gorai.009G080200 Gossypium raimondii HOM05D006002 ORTHO05D007651 2.5e-16 89.4 65 63.1
unitig_748.g7639 Utricularia gibba HOM05D006002 ORTHO05D007651 3.3e-16 89.0 59 69.5
Thecc.03G324000 Theobroma cacao HOM05D006002 ORTHO05D007651 4.3e-16 88.6 65 63.1
Gohir.A05G076100 Gossypium hirsutum HOM05D006002 ORTHO05D007651 7.4e-16 87.8 65 61.5
COL.COLO4_30126 Corchorus olitorius HOM05D006002 ORTHO05D007651 9.7e-16 87.4 67 62.7
ATR0165G036 Amborella trichopoda HOM05D006002 ORTHO05D007651 2.8e-15 85.9 59 67.8
SEGI_15629 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 1.8e-14 83.2 65 56.9
SEGI_37419 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 1.8e-14 83.2 60 61.7
Mapoly0051s0043 Marchantia polymorpha HOM05D006002 ORTHO05D007651 2.4e-14 82.8 59 59.3
Potri.018G000850 Populus trichocarpa HOM05D006002 ORTHO05D007651 3.1e-14 82.4 58 72.4
Pp3c1_22930 Physcomitrium patens HOM05D006002 ORTHO05D007651 5.3e-14 81.6 59 61.0
AagrBONN_evm.TU.Sc2ySwM_344.4971 Anthoceros agrestis HOM05D006002 ORTHO05D007651 2.6e-13 79.3 65 55.4
CBR_g8978 Chara braunii HOM05D006002 ORTHO05D007651 5.9e-13 78.2 66 59.1
Cre07.g337516 Chlamydomonas reinhardtii HOM05D006002 ORTHO05D007651 1.3e-12 77.0 94 50.0
SMO145G0236 Selaginella moellendorffii HOM05D006002 ORTHO05D007651 1.3e-12 77.0 59 61.0
MCO01G477 Micromonas commoda HOM05D006002 ORTHO05D007651 2.0e-08 63.2 120 36.7


User provided reference genes

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