Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p088694 Quercus lobata HOM05D006002 ORTHO05D007651 2.0e-92 342.4 172 100.0
QL03p043202 Quercus lobata HOM05D006002 ORTHO05D007651 1.7e-80 302.8 189 84.1
QL04p088541 Quercus lobata HOM05D006002 ORTHO05D007651 5.6e-71 271.2 171 83.0
QL04p088993 Quercus lobata HOM05D006002 ORTHO05D007651 5.6e-71 271.2 171 83.0
Cfa022974 Carpinus fangiana HOM05D006002 ORTHO05D007651 8.6e-64 247.3 171 76.0
Haze_07820 Corylus avellana HOM05D006002 ORTHO05D007651 5.6e-63 244.6 171 74.9
CiPaw.11G062100 Carya illinoinensis HOM05D006002 ORTHO05D007651 1.4e-58 229.9 165 70.9
Atru.chr2.1886 Acer truncatum HOM05D006002 ORTHO05D007651 1.6e-54 216.5 170 63.5
Prupe.4G144100 Prunus persica HOM05D006002 ORTHO05D007651 6.2e-54 214.5 170 66.5
CANSAT56G1259 Cannabis sativa HOM05D006002 ORTHO05D007651 1.3e-51 206.8 184 60.3
MD10G1197800 Malus domestica HOM05D006002 ORTHO05D007651 1.4e-50 203.4 170 65.3
arahy.Tifrunner.gnm1.ann1.0RH0I3 Arachis hypogaea HOM05D006002 ORTHO05D007651 3.2e-50 202.2 173 59.5
arahy.Tifrunner.gnm1.ann1.HWL53Q Arachis hypogaea HOM05D006002 ORTHO05D007651 5.4e-50 201.4 173 59.0
FvH4_3g16091 Fragaria vesca HOM05D006002 ORTHO05D007651 5.4e-50 201.4 170 61.8
TAR627G1081 Trochodendron aralioides HOM05D006002 ORTHO05D007651 9.3e-50 200.7 170 60.6
FAN11G0453 Fragaria x ananassa HOM05D006002 ORTHO05D007651 1.2e-49 200.3 170 61.8
Lalb_Chr25g0284701 Lupinus albus HOM05D006002 ORTHO05D007651 1.6e-49 199.9 158 62.7
FAN16G0275 Fragaria x ananassa HOM05D006002 ORTHO05D007651 3.5e-49 198.7 170 60.6
Ca_09098_v3 Cicer arietinum L. HOM05D006002 ORTHO05D007651 4.6e-49 198.4 193 54.9
Glyma.15G260100 Glycine max HOM05D006002 ORTHO05D007651 7.9e-49 197.6 170 60.0
Cpa.g.sc42.79 Carica papaya HOM05D006002 ORTHO05D007651 1.0e-48 197.2 166 60.8
FAN25G3512 Fragaria x ananassa HOM05D006002 ORTHO05D007651 1.0e-48 197.2 170 60.6
Medtr7g107330 Medicago truncatula HOM05D006002 ORTHO05D007651 5.1e-48 194.9 172 58.1
Nn3g20175 Nelumbo nucifera HOM05D006002 ORTHO05D007651 5.1e-48 194.9 170 60.6
Psat3g026200 Pisum sativum HOM05D006002 ORTHO05D007651 5.1e-48 194.9 171 59.1
RcHm_v2.0_Chr5g0027061 Rosa chinensis HOM05D006002 ORTHO05D007651 1.1e-47 193.7 171 62.0
TWI53G1943 Tripterygium wilfordii HOM05D006002 ORTHO05D007651 1.5e-47 193.4 170 57.6
Ciclev10020646m.g Citrus clementina HOM05D006002 ORTHO05D007651 2.5e-47 192.6 171 56.7
Nitab4.5_0000294g0110 Nicotiana tabacum HOM05D006002 ORTHO05D007651 4.8e-46 188.3 173 59.0
Nitab4.5_0001235g0050 Nicotiana tabacum HOM05D006002 ORTHO05D007651 6.2e-46 188.0 173 59.0
THA.LOC104819332 Tarenaya hassleriana HOM05D006002 ORTHO05D007651 1.1e-45 187.2 171 57.3
CDE02G2905 Ceratophyllum demersum HOM05D006002 ORTHO05D007651 1.4e-45 186.8 171 55.0
Potri.003G221400 Populus trichocarpa HOM05D006002 ORTHO05D007651 1.8e-45 186.4 177 57.1
CsaV3_2G022200 Cucumis sativus L. HOM05D006002 ORTHO05D007651 2.4e-45 186.0 176 58.0
ClCG11G016270 Citrullus lanatus HOM05D006002 ORTHO05D007651 3.1e-45 185.7 176 58.0
Lj3g0018048 Lotus japonicus HOM05D006002 ORTHO05D007651 4.0e-45 185.3 191 55.5
QL04p062372 Quercus lobata HOM05D006002 ORTHO05D007651 5.3e-45 184.9 135 76.3
Manes.03G102600 Manihot esculenta HOM05D006002 ORTHO05D007651 1.2e-44 183.7 171 57.3
Eucgr.F01438 Eucalyptus grandis HOM05D006002 ORTHO05D007651 3.4e-44 182.2 193 53.4
Sopen07g034460 Solanum pennellii HOM05D006002 ORTHO05D007651 3.4e-44 182.2 172 58.1
VMungo1080G0998 Vigna mungo HOM05D001395 ORTHO05D002039 3.4e-44 182.2 171 55.6
Actinidia37107 Actinidia chinensis HOM05D006002 ORTHO05D007651 4.5e-44 181.8 174 57.5
Cc05_g15870 Coffea canephora HOM05D006002 ORTHO05D007651 4.5e-44 181.8 170 58.2
Sabra03G0164800 Salix brachista HOM05D006002 ORTHO05D007651 4.5e-44 181.8 178 55.6
Sed0002243 Sechium edule HOM05D006002 ORTHO05D007651 4.5e-44 181.8 176 57.4
PGSC0003DMG400022243 Solanum tuberosum HOM05D006002 ORTHO05D007651 4.5e-44 181.8 172 57.6
MELO3C010553.2 Cucumis melo HOM05D006002 ORTHO05D007651 5.8e-44 181.4 176 56.2
Oeu052016.1 Olea europaea HOM05D006002 ORTHO05D007651 7.6e-44 181.0 174 56.3
Phvul.005G050900 Phaseolus vulgaris HOM05D006002 ORTHO05D007651 9.9e-44 180.6 168 58.3
Rhsim04G0006400 Rhododendron simsii HOM05D006002 ORTHO05D007651 1.3e-43 180.3 172 57.0
Hma1.2p1_0193F.1_g084460 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 1.7e-43 179.9 176 55.7
Hma1.2p1_0193F.1_g084470 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 1.7e-43 179.9 176 55.7
Glyma.08G167200 Glycine max HOM05D006002 ORTHO05D007651 2.2e-43 179.5 171 57.3
Eucgr.F01442 Eucalyptus grandis HOM05D006002 ORTHO05D007651 1.1e-42 177.2 193 51.3
Solyc07g066280.3 Solanum lycopersicum HOM05D006002 ORTHO05D007651 1.1e-42 177.2 172 56.4
TPR.G18376 Trifolium pratense HOM05D006002 ORTHO05D007651 1.1e-42 177.2 158 58.2
Hund02296 Selenicereus undatus HOM05D006002 ORTHO05D007651 1.4e-42 176.8 176 54.0
Aqoxy1G01586 Aquilegia oxysepala HOM05D006002 ORTHO05D007651 1.9e-42 176.4 175 54.3
Sc03g0007860 Simmondsia chinensis HOM05D006002 ORTHO05D007651 4.2e-42 175.3 171 53.2
CSS0008604 Camellia sinensis var. sinensis HOM05D006002 ORTHO05D007651 1.6e-41 173.3 171 56.7
Lsat_1_v5_gn_7_116060 Lactuca sativa HOM05D006002 ORTHO05D007651 2.1e-41 172.9 171 52.0
Peaxi162Scf00232g00102 Petunia axillaris HOM05D006002 ORTHO05D007651 6.0e-41 171.4 165 57.0
Ah.04g163380 Amaranthus hybridus HOM05D006002 ORTHO05D007651 1.0e-40 170.6 174 52.3
PGR083G2675 Punica granatum HOM05D006002 ORTHO05D007651 1.0e-40 170.6 178 54.5
vmacro09790 Vaccinium macrocarpon HOM05D006002 ORTHO05D007651 1.0e-40 170.6 172 57.0
CAN.G943.23 Capsicum annuum HOM05D006002 ORTHO05D007651 1.3e-40 170.2 172 55.8
CARHR278060 Cardamine hirsuta HOM05D006002 ORTHO05D007651 5.1e-40 168.3 173 52.0
Migut.M01570 Erythranthe guttata HOM05D006002 ORTHO05D007651 5.1e-40 168.3 170 52.4
A06p30870 Brassica napus HOM05D006002 ORTHO05D007651 6.7e-40 167.9 171 52.0
BraA06t26026Z Brassica rapa HOM05D006002 ORTHO05D007651 8.7e-40 167.5 171 52.6
PSO675G3741 Papaver somniferum HOM05D006002 ORTHO05D007651 2.5e-39 166.0 170 51.2
MSTRG.16122 Avicennia marina HOM05D006002 ORTHO05D007651 3.3e-39 165.6 174 54.6
MBI02_g43301_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 4.3e-39 165.2 184 47.8
BolC3t18471H Brassica oleracea HOM05D006002 ORTHO05D007651 7.4e-39 164.5 172 51.7
EL10Ac4g08518 Beta vulgaris HOM05D006002 ORTHO05D007651 9.6e-39 164.1 174 48.9
C03p62100 Brassica napus HOM05D006002 ORTHO05D007651 1.3e-38 163.7 171 52.0
Aa31LG1G17780 Aethionema arabicum HOM05D006002 ORTHO05D007651 1.6e-38 163.3 171 52.6
BcaB02g09782 Brassica carinata HOM05D006002 ORTHO05D007651 2.8e-38 162.5 174 50.6
HanXRQChr11g0335201 Helianthus annuus HOM05D006002 ORTHO05D007651 2.8e-38 162.5 170 50.6
BcaC01g02672 Brassica carinata HOM05D006002 ORTHO05D007651 3.7e-38 162.2 172 51.2
AL8G41420 Arabidopsis lyrata HOM05D006002 ORTHO05D007651 6.2e-38 161.4 194 49.5
Lj8A185G55 Lonicera japonica HOM05D006002 ORTHO05D007651 1.4e-37 160.2 173 52.6
Thhalv10004403m.g Eutrema salsugineum HOM05D006002 ORTHO05D007651 5.3e-37 158.3 172 50.6
AT5G64150 Arabidopsis thaliana HOM05D006002 ORTHO05D007651 6.9e-37 157.9 174 50.6
unitig_748.g7639 Utricularia gibba HOM05D006002 ORTHO05D007651 9.0e-37 157.5 171 49.7
SalBow8G1862 Salvia bowleyana HOM05D006002 ORTHO05D007651 1.2e-36 157.1 186 49.5
Actinidia35439 Actinidia chinensis HOM05D006002 ORTHO05D007651 1.5e-36 156.8 160 56.2
COL.COLO4_25103 Corchorus olitorius HOM05D006002 ORTHO05D007651 3.4e-36 155.6 180 51.7
MD05G1214000 Malus domestica HOM05D006002 ORTHO05D007651 3.4e-36 155.6 153 60.1
PSO541G1619 Papaver somniferum HOM05D006002 ORTHO05D007651 4.5e-36 155.2 170 50.0
SGA_v2.0_scaffold7G03564 Striga asiatica HOM05D006002 ORTHO05D007651 4.5e-36 155.2 174 50.0
Carub.0008s2494 Capsella rubella HOM05D006002 ORTHO05D007651 1.7e-35 153.3 174 49.4
Sp2g27210 Schrenkiella parvula HOM05D006002 ORTHO05D007651 2.9e-35 152.5 172 47.7
Gohir.A05G076100 Gossypium hirsutum HOM05D006002 ORTHO05D007651 2.7e-33 146.0 184 47.8
SEGI_37419 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 4.6e-33 145.2 170 44.7
ECA236G2913 Erigeron canadensis HOM05D006002 ORTHO05D007651 6.0e-33 144.8 170 45.9
Gohir.D05G078800 Gossypium hirsutum HOM05D006002 ORTHO05D007651 1.8e-32 143.3 184 47.3
Gorai.009G080200 Gossypium raimondii HOM05D006002 ORTHO05D007651 1.8e-32 143.3 184 47.3
AUR62041934 Chenopodium quinoa HOM05D006002 ORTHO05D007651 5.1e-32 141.7 152 52.0
GSVIVG01020461001 Vitis vinifera HOM05D006002 ORTHO05D007651 1.9e-31 139.8 129 57.4
AUR62035491 Chenopodium quinoa HOM05D006002 ORTHO05D007651 5.7e-31 138.3 150 50.0
MBI02_g20986_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 2.4e-29 132.9 184 42.9
Duzib168G0541 Durio zibethinus HOM05D006002 ORTHO05D007651 5.3e-29 131.7 182 46.2
Thecc.03G324000 Theobroma cacao HOM05D006002 ORTHO05D007651 2.6e-28 129.4 186 45.2
ATR0165G036 Amborella trichopoda HOM05D006002 ORTHO05D007651 1.0e-27 127.5 138 47.1
SMO145G0236 Selaginella moellendorffii HOM05D006002 ORTHO05D007651 1.9e-26 123.2 181 41.4
HPP92_001894 Vanilla planifolia HOM05D006002 ORTHO05D004222 2.5e-26 122.9 161 46.6
Gohir.1Z049302 Gossypium hirsutum HOM05D006002 ORTHO05D007651 1.0e-24 117.5 161 46.6
Dinv42524 Davidia involucrata HOM05D006002 ORTHO05D007651 5.1e-24 115.2 151 47.0
MD05G1214300 Malus domestica HOM05D006002 ORTHO05D007651 1.5e-23 113.6 110 60.9
Potri.018G000850 Populus trichocarpa HOM05D006002 ORTHO05D007651 3.1e-21 105.9 144 43.8
Pp3c1_22930 Physcomitrium patens HOM05D006002 ORTHO05D007651 2.2e-19 99.8 136 40.4
Os12g0612500 Oryza sativa ssp. japonica HOM05D006002 ORTHO05D007651 1.1e-18 97.4 156 39.7
Potri.001G003632 Populus trichocarpa HOM05D006002 ORTHO05D007651 1.1e-18 97.4 118 50.8
AagrBONN_evm.TU.Sc2ySwM_344.4971 Anthoceros agrestis HOM05D006002 ORTHO05D007651 4.2e-18 95.5 151 37.1
Mapoly0051s0043 Marchantia polymorpha HOM05D006002 ORTHO05D007651 6.1e-17 91.7 126 38.9
CBR_g8978 Chara braunii HOM05D006002 ORTHO05D007651 1.8e-13 80.1 139 36.7
PRCOL_00003514 Prasinoderma coloniale HOM05D006002 ORTHO05D007651 1.0e-11 74.3 185 30.8
CAN.G42.13 Capsicum annuum HOM05D006002 ORTHO05D007651 3.8e-11 72.4 87 49.4
BcaB04g17517 Brassica carinata HOM05D006002 ORTHO05D007651 3.6e-09 65.9 109 34.9
TPR.G32276 Trifolium pratense HOM05D006002 ORTHO05D007651 6.1e-09 65.1 54 53.7
Cre07.g337516 Chlamydomonas reinhardtii HOM05D006002 ORTHO05D007651 8.8e-08 61.2 144 33.3


User provided reference genes

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