Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p088484 Quercus lobata HOM05D007250 ORTHO05D009162 3.2e-153 545.0 270 100.0
QL04p088943 Quercus lobata HOM05D007250 ORTHO05D009162 2.0e-152 542.3 270 99.6
Haze_07815 Corylus avellana HOM05D007250 ORTHO05D009162 5.6e-110 401.4 275 76.0
CiPaw.11G061700 Carya illinoinensis HOM05D007250 ORTHO05D009162 1.2e-99 367.1 276 69.2
Glyma.15G260800 Glycine max HOM05D007250 ORTHO05D009162 9.7e-86 320.9 285 59.3
Sabra07G0056900 Salix brachista HOM05D007250 ORTHO05D009162 2.0e-83 313.2 265 65.7
Ciclev10005586m.g Citrus clementina HOM05D007250 ORTHO05D009162 1.7e-82 310.1 275 60.4
Duzib213G0161 Durio zibethinus HOM05D007250 ORTHO05D009162 1.7e-82 310.1 246 64.6
Thecc.07G179900 Theobroma cacao HOM05D007250 ORTHO05D009162 1.7e-82 310.1 272 59.6
Manes.06G175800 Manihot esculenta HOM05D007250 ORTHO05D009162 3.8e-82 308.9 219 69.4
Potri.007G069400 Populus trichocarpa HOM05D007250 ORTHO05D009162 1.4e-81 307.0 207 75.4
MD05G1040700 Malus domestica HOM05D007250 ORTHO05D009162 1.9e-81 306.6 210 70.5
CANSAT56G4154 Cannabis sativa HOM05D007250 ORTHO05D009162 2.5e-81 306.2 267 59.9
Ca_03591_v3 Cicer arietinum L. HOM05D007250 ORTHO05D009162 2.5e-81 306.2 291 58.8
Gorai.013G142400 Gossypium raimondii HOM05D007250 ORTHO05D009162 4.2e-81 305.4 207 72.5
Lalb_Chr25g0284601 Lupinus albus HOM05D007250 ORTHO05D009162 5.5e-81 305.1 258 61.6
vmacro11701 Vaccinium macrocarpon HOM05D007250 ORTHO05D009162 5.5e-81 305.1 274 61.7
Medtr1g060720 Medicago truncatula HOM05D007250 ORTHO05D009162 9.4e-81 304.3 232 66.8
Phvul.005G050100 Phaseolus vulgaris HOM05D007250 ORTHO05D009162 1.2e-80 303.9 250 62.0
GSVIVG01036780001 Vitis vinifera HOM05D007250 ORTHO05D009162 3.6e-80 302.4 209 70.3
A09p60900 Brassica napus HOM05D007250 ORTHO05D009162 1.4e-79 300.4 220 67.3
BraA09t41463Z Brassica rapa HOM05D007250 ORTHO05D009162 2.3e-79 299.7 220 67.3
Lsat_1_v5_gn_7_75520 Lactuca sativa HOM05D007250 ORTHO05D009162 5.1e-79 298.5 238 63.0
Lj3g0020784 Lotus japonicus HOM05D007250 ORTHO05D009162 6.7e-79 298.1 276 59.1
ClCG02G018630 Citrullus lanatus HOM05D007250 ORTHO05D009162 8.8e-79 297.7 244 63.9
CSS0017513 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 2.0e-78 296.6 208 70.7
Gohir.D13G127200 Gossypium hirsutum HOM05D007250 ORTHO05D009162 2.5e-78 296.2 202 71.8
RcHm_v2.0_Chr6g0272151 Rosa chinensis HOM05D007250 ORTHO05D009162 4.3e-78 295.4 210 69.5
Nitab4.5_0003777g0030 Nicotiana tabacum HOM05D007250 ORTHO05D009162 5.7e-78 295.0 231 64.1
C08p44490 Brassica napus HOM05D007250 ORTHO05D009162 9.7e-78 294.3 273 58.2
Carub.0001s1619 Capsella rubella HOM05D007250 ORTHO05D009162 9.7e-78 294.3 217 66.4
Hma1.2p1_0151F.1_g067310 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 1.3e-77 293.9 205 72.2
Sed0012120 Sechium edule HOM05D007250 ORTHO05D009162 1.3e-77 293.9 238 64.3
Actinidia12769 Actinidia chinensis HOM05D007250 ORTHO05D000003 1.7e-77 293.5 244 61.9
CAN.G492.76 Capsicum annuum HOM05D007250 ORTHO05D009162 2.2e-77 293.1 279 56.6
Nn3g20174 Nelumbo nucifera HOM05D007250 ORTHO05D009162 2.8e-77 292.7 266 55.6
Sopen10g001520 Solanum pennellii HOM05D007250 ORTHO05D009162 4.8e-77 292.0 209 68.9
MSTRG.16100 Avicennia marina HOM05D007250 ORTHO05D009162 6.3e-77 291.6 216 66.2
CsaV3_6G013550 Cucumis sativus L. HOM05D007250 ORTHO05D009162 6.3e-77 291.6 245 63.7
Peaxi162Scf00114g00116 Petunia axillaris HOM05D007250 ORTHO05D009162 8.2e-77 291.2 221 64.7
Rhsim06G0242100 Rhododendron simsii HOM05D007250 ORTHO05D009162 1.8e-76 290.0 308 54.2
Dinv19589 Davidia involucrata HOM05D007250 ORTHO05D009162 2.4e-76 289.7 194 75.3
Solyc10g005540.4 Solanum lycopersicum HOM05D007250 ORTHO05D009162 4.1e-76 288.9 209 68.4
AL1G28580 Arabidopsis lyrata HOM05D007250 ORTHO05D009162 9.1e-76 287.7 273 57.5
TWI38G0063 Tripterygium wilfordii HOM05D007250 ORTHO05D009162 1.2e-75 287.3 241 59.8
PSO541G5100 Papaver somniferum HOM05D007250 ORTHO05D009162 2.0e-75 286.6 279 55.9
BolC8t51991H Brassica oleracea HOM05D007250 ORTHO05D009162 2.6e-75 286.2 283 55.5
HanXRQChr05g0160551 Helianthus annuus HOM05D007250 ORTHO05D009162 4.5e-75 285.4 208 67.3
Sp1g14600 Schrenkiella parvula HOM05D007250 ORTHO05D009162 4.5e-75 285.4 273 56.4
PGSC0003DMG400011276 Solanum tuberosum HOM05D007250 ORTHO05D009162 4.5e-75 285.4 209 67.9
CARHR016920 Cardamine hirsuta HOM05D007250 ORTHO05D009162 5.9e-75 285.0 273 55.7
CSS0024774 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 7.7e-75 284.6 233 63.5
FvH4_2g12161 Fragaria vesca HOM05D007250 ORTHO05D009162 1.3e-74 283.9 210 66.2
Thhalv10008448m.g Eutrema salsugineum HOM05D007250 ORTHO05D009162 2.2e-74 283.1 219 63.9
Eucgr.F04459 Eucalyptus grandis HOM05D007250 ORTHO05D009162 5.0e-74 282.0 241 60.2
Oeu034977.1 Olea europaea HOM05D007250 ORTHO05D009162 5.0e-74 282.0 243 58.0
AT1G16445 Arabidopsis thaliana HOM05D007250 ORTHO05D009162 8.5e-74 281.2 273 56.4
Nitab4.5_0008957g0010 Nicotiana tabacum HOM05D007250 ORTHO05D009162 1.4e-73 280.4 262 57.3
AUR62018167 Chenopodium quinoa HOM05D007250 ORTHO05D009162 7.9e-72 274.6 218 61.5
Lj2A15T78 Lonicera japonica HOM05D007250 ORTHO05D009162 7.9e-72 274.6 201 67.2
Aa31LG7G990 Aethionema arabicum HOM05D007250 ORTHO05D009162 3.0e-71 272.7 218 62.8
unitig_748.g7850 Utricularia gibba HOM05D007250 ORTHO05D001497 1.5e-70 270.4 275 50.2
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 5.7e-70 268.5 258 53.9
COL.COLO4_32252 Corchorus olitorius HOM05D007250 ORTHO05D009162 9.7e-70 267.7 228 63.2
MBI18_g10574_MAGBIO Magnolia biondii HOM05D007250 ORTHO05D009162 3.7e-69 265.8 181 71.8
Atru.chr1.107 Acer truncatum HOM05D007250 ORTHO05D009162 9.1e-68 261.2 205 65.4
Gohir.A13G123300 Gossypium hirsutum HOM05D007250 ORTHO05D009162 1.5e-67 260.4 257 53.7
Os05g0511700 Oryza sativa ssp. japonica HOM05D007250 ORTHO05D009162 1.0e-66 257.7 205 59.5
Psat1g013800 Pisum sativum HOM05D007250 ORTHO05D009162 1.3e-66 257.3 220 61.8
arahy.Tifrunner.gnm1.ann1.3NS56Y Arachis hypogaea HOM05D007250 ORTHO05D009162 2.2e-66 256.5 257 55.6
Zm00001eb292510 Zea mays HOM05D007250 ORTHO05D009162 1.1e-65 254.2 204 60.8
AUR62042431 Chenopodium quinoa HOM05D007250 ORTHO05D009162 1.5e-65 253.8 191 63.4
CDE01G0022 Ceratophyllum demersum HOM05D007250 ORTHO05D009162 2.5e-65 253.1 207 59.9
ATR0165G048 Amborella trichopoda HOM05D007250 ORTHO05D009162 3.2e-65 252.7 207 58.5
TAR627G0140 Trochodendron aralioides HOM05D007250 ORTHO05D009162 9.4e-65 251.1 240 56.2
Prupe.8G055300 Prunus persica HOM05D007250 ORTHO05D009162 1.2e-64 250.8 169 72.2
HPP92_000965 Vanilla planifolia HOM05D007250 ORTHO05D009162 2.0e-62 243.4 207 58.0
Hund20100 Selenicereus undatus HOM05D007250 ORTHO05D009162 5.7e-62 241.9 184 65.2
FAN20G1272 Fragaria x ananassa HOM05D007250 ORTHO05D009162 1.7e-58 230.3 213 58.7
Aqoxy6G01374 Aquilegia oxysepala HOM05D007250 ORTHO05D009162 1.5e-57 227.3 211 55.5
Pp3c16_19260 Physcomitrium patens HOM05D007250 ORTHO05D009162 5.5e-57 225.3 197 53.3
SGA_v2.0_scaffold7G03608 Striga asiatica HOM05D001395 ORTHO05D002039 5.5e-57 225.3 226 52.7
Hma1.2p1_0151F.1_g067320 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 1.1e-52 211.1 140 75.0
Mapoly0102s0005 Marchantia polymorpha HOM05D007250 ORTHO05D009162 1.4e-52 210.7 201 48.8
Cpa.g.sc34.15 Carica papaya HOM05D007250 ORTHO05D009162 4.1e-52 209.1 188 61.2
AagrBONN_evm.TU.Sc2ySwM_117.37 Anthoceros agrestis HOM05D007250 ORTHO05D009162 2.5e-49 199.9 188 52.7
EL10Ac2g03263 Beta vulgaris HOM05D007250 ORTHO05D009162 3.2e-49 199.5 273 41.8
SMO141G0022 Selaginella moellendorffii HOM05D007250 ORTHO05D009162 2.3e-47 193.4 184 49.5
Cc05_g16330 Coffea canephora HOM05D007250 ORTHO05D009162 1.8e-44 183.7 140 65.0
PGR031G0704 Punica granatum HOM05D007250 ORTHO05D009162 4.5e-43 179.1 209 45.0
QL03p068942 Quercus lobata HOM05D007250 ORTHO05D009162 1.8e-39 167.2 209 51.2
Hma1.2p1_0616F.1_g189960 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 8.9e-39 164.9 198 49.5
Migut.M01530 Erythranthe guttata HOM05D007250 ORTHO05D009162 1.6e-35 154.1 110 66.4
MCO03G414 Micromonas commoda HOM05D007250 ORTHO05D009162 2.3e-31 140.2 198 36.9
FAN24G3506 Fragaria x ananassa HOM05D007250 ORTHO05D009162 2.4e-28 130.2 96 65.6
CBR_g32272 Chara braunii HOM05D007250 ORTHO05D009162 3.5e-27 126.3 144 45.1
SEGI_10655 Sequoiadendron giganteum HOM05D007250 ORTHO05D009162 4.6e-27 125.9 104 57.7
QL04p088144 Quercus lobata HOM05D007250 ORTHO05D009162 8.6e-26 121.7 68 89.7
Cre12.g517550 Chlamydomonas reinhardtii HOM05D007250 ORTHO05D009162 1.1e-25 121.3 165 40.6
QL04p088875 Quercus lobata HOM05D000287 ORTHO05D000319 1.9e-25 120.6 69 87.0
Migut.M01529 Erythranthe guttata HOM05D007250 ORTHO05D009162 9.5e-25 118.2 76 69.7
Sc10g0008800 Simmondsia chinensis HOM05D007250 ORTHO05D009162 5.4e-20 102.4 87 56.3
CSS0048664 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 7.1e-20 102.1 113 52.2
PRCOL_00005754 Prasinoderma coloniale HOM05D007250 ORTHO05D009162 1.5e-14 84.3 202 28.7
Mapoly0062s0100 Marchantia polymorpha HOM05D007250 ORTHO05D009162 5.4e-12 75.9 121 36.4
QL04p088027 Quercus lobata HOM05D037085 ORTHO05D009162 9.2e-12 75.1 57 66.7
QL04p088222 Quercus lobata HOM05D007250 ORTHO05D009162 1.6e-08 64.3 47 68.1
MELO3C019639.2 Cucumis melo HOM05D007250 ORTHO05D009162 2.4e-07 60.5 39 64.1
QL04p088276 Quercus lobata HOM05D037085 ORTHO05D009162 3.1e-07 60.1 36 77.8
VMungo1080G0363 Vigna mungo HOM05D007250 ORTHO05D009162 1.2e-06 58.2 39 59.0


User provided reference genes

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