Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p088276 Quercus lobata HOM05D037085 ORTHO05D009162 1.4e-124 449.5 208 100.0
QL04p088027 Quercus lobata HOM05D037085 ORTHO05D009162 2.9e-90 335.5 198 83.8
QL04p088760 Quercus lobata HOM05D037085 ORTHO05D336974 2.3e-55 219.5 198 61.1
QL04p088233 Quercus lobata HOM05D027036 ORTHO05D337258 1.9e-20 103.6 84 65.5
CiPaw.11G061700 Carya illinoinensis HOM05D007250 ORTHO05D009162 4.8e-08 62.4 44 68.2
Cpa.g.sc34.15 Carica papaya HOM05D007250 ORTHO05D009162 1.1e-07 61.2 44 68.2
QL04p088484 Quercus lobata HOM05D007250 ORTHO05D009162 1.4e-07 60.8 36 77.8
QL04p088943 Quercus lobata HOM05D007250 ORTHO05D009162 1.4e-07 60.8 36 77.8
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 1.8e-07 60.5 48 58.3
Haze_07815 Corylus avellana HOM05D007250 ORTHO05D009162 1.8e-07 60.5 44 68.2
Sed0012120 Sechium edule HOM05D007250 ORTHO05D009162 2.4e-07 60.1 41 68.3
Medtr1g060720 Medicago truncatula HOM05D007250 ORTHO05D009162 3.1e-07 59.7 126 37.3
arahy.Tifrunner.gnm1.ann1.3NS56Y Arachis hypogaea HOM05D007250 ORTHO05D009162 5.3e-07 58.9 47 57.4
Manes.06G175800 Manihot esculenta HOM05D007250 ORTHO05D009162 5.3e-07 58.9 33 78.8
ClCG02G018630 Citrullus lanatus HOM05D007250 ORTHO05D009162 6.9e-07 58.5 41 70.7
Dinv19589 Davidia involucrata HOM05D007250 ORTHO05D009162 9.0e-07 58.2 41 65.9
CSS0017513 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 1.2e-06 57.8 41 65.9
CSS0024774 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 1.2e-06 57.8 41 65.9
Lsat_1_v5_gn_7_75520 Lactuca sativa HOM05D007250 ORTHO05D009162 1.2e-06 57.8 41 65.9
GSVIVG01036780001 Vitis vinifera HOM05D007250 ORTHO05D009162 1.2e-06 57.8 44 63.6
Glyma.15G260800 Glycine max HOM05D007250 ORTHO05D009162 1.5e-06 57.4 33 72.7
Potri.007G069400 Populus trichocarpa HOM05D007250 ORTHO05D009162 1.5e-06 57.4 36 69.4
CsaV3_6G013550 Cucumis sativus L. HOM05D007250 ORTHO05D009162 2.0e-06 57.0 41 68.3
HanXRQChr05g0160551 Helianthus annuus HOM05D007250 ORTHO05D009162 2.0e-06 57.0 41 63.4
Lalb_Chr25g0284601 Lupinus albus HOM05D007250 ORTHO05D009162 2.0e-06 57.0 55 52.7
MD05G1040700 Malus domestica HOM05D007250 ORTHO05D009162 2.0e-06 57.0 33 75.8
Psat1g013800 Pisum sativum HOM05D007250 ORTHO05D009162 2.0e-06 57.0 117 35.0
Ciclev10005586m.g Citrus clementina HOM05D007250 ORTHO05D009162 2.6e-06 56.6 33 72.7
CAN.G492.76 Capsicum annuum HOM05D007250 ORTHO05D009162 4.5e-06 55.8 36 63.9
COL.COLO4_32252 Corchorus olitorius HOM05D007250 ORTHO05D009162 5.8e-06 55.5 36 66.7
Lj3g0020784 Lotus japonicus HOM05D007250 ORTHO05D009162 5.8e-06 55.5 55 54.5
Atru.chr1.107 Acer truncatum HOM05D007250 ORTHO05D009162 7.6e-06 55.1 49 49.0
MSTRG.16100 Avicennia marina HOM05D007250 ORTHO05D009162 9.9e-06 54.7 44 59.1
Nn3g20174 Nelumbo nucifera HOM05D007250 ORTHO05D009162 9.9e-06 54.7 41 58.5
RcHm_v2.0_Chr6g0272151 Rosa chinensis HOM05D007250 ORTHO05D009162 9.9e-06 54.7 41 65.9
Sabra07G0056900 Salix brachista HOM05D007250 ORTHO05D009162 9.9e-06 54.7 36 63.9
Hund20100 Selenicereus undatus HOM05D007250 ORTHO05D009162 9.9e-06 54.7 36 63.9


User provided reference genes

Program Settings