Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p084648 Quercus lobata HOM05D000831 ORTHO05D000660 1.6e-36 155.6 79 100.0
QL04p084602 Quercus lobata HOM05D000831 ORTHO05D000660 1.7e-35 152.1 79 97.5
CiPaw.11G177900 Carya illinoinensis HOM05D000831 ORTHO05D000660 2.0e-15 85.5 76 63.2
CiPaw.10G137800 Carya illinoinensis HOM05D000831 ORTHO05D000660 5.8e-15 84.0 76 61.8
Cfa020494 Carpinus fangiana HOM05D000831 ORTHO05D000660 1.3e-14 82.8 76 61.8
Haze_09538 Corylus avellana HOM05D000831 ORTHO05D000660 1.3e-14 82.8 76 61.8
QL08p017341 Quercus lobata HOM05D000831 ORTHO05D000660 1.7e-14 82.4 76 61.8
Ca_01797_v3 Cicer arietinum L. HOM05D000831 ORTHO05D000660 8.4e-14 80.1 75 62.7
Lj3g0009849 Lotus japonicus HOM05D000831 ORTHO05D000660 1.4e-13 79.3 75 62.7
QL08p017345 Quercus lobata HOM05D000831 ORTHO05D000660 1.4e-13 79.3 76 60.5
Medtr2g481160 Medicago truncatula HOM05D000831 ORTHO05D000660 2.4e-13 78.6 75 62.7
Psat5g247240 Pisum sativum HOM05D000831 ORTHO05D000660 2.4e-13 78.6 74 62.2
Medtr2g481150 Medicago truncatula HOM05D000831 ORTHO05D000660 4.2e-13 77.8 75 61.3
Glyma.12G218400 Glycine max HOM05D000831 ORTHO05D000660 9.3e-13 76.6 75 62.7
Psat5g247320 Pisum sativum HOM05D000831 ORTHO05D000660 9.3e-13 76.6 72 63.9
Glyma.13G282200 Glycine max HOM05D000831 ORTHO05D000660 1.6e-12 75.9 75 61.3
Glyma.13G282400 Glycine max HOM05D000831 ORTHO05D000660 1.6e-12 75.9 75 61.3
Lj3g0014455 Lotus japonicus HOM05D000831 ORTHO05D000660 1.6e-12 75.9 75 58.7
Prupe.4G191800 Prunus persica HOM05D000831 ORTHO05D000660 3.5e-12 74.7 75 56.0
Lalb_Chr01g0017081 Lupinus albus HOM05D000831 ORTHO05D000660 1.3e-11 72.8 75 57.3
Glyma.12G218300 Glycine max HOM05D000831 ORTHO05D000660 1.8e-11 72.4 75 57.3
Phvul.005G087318 Phaseolus vulgaris HOM05D000831 ORTHO05D000660 2.3e-11 72.0 75 58.7
Lalb_Chr01g0017091 Lupinus albus HOM05D000831 ORTHO05D000660 3.9e-11 71.2 75 57.3
TPR.G4003 Trifolium pratense HOM05D000831 ORTHO05D000660 6.7e-11 70.5 58 62.1
RcHm_v2.0_Chr5g0036191 Rosa chinensis HOM05D000831 ORTHO05D000660 8.7e-11 70.1 75 56.0
FvH4_3g21130 Fragaria vesca HOM05D000831 ORTHO05D000660 1.1e-10 69.7 75 56.0
FAN11G3132 Fragaria x ananassa HOM05D000831 ORTHO05D000660 1.1e-10 69.7 75 56.0
Phvul.005G087300 Phaseolus vulgaris HOM05D000831 ORTHO05D000660 1.9e-10 68.9 76 55.3
FAN21G3169 Fragaria x ananassa HOM05D000831 ORTHO05D000660 3.3e-10 68.2 75 54.7
FAN25G0210 Fragaria x ananassa HOM05D000831 ORTHO05D000660 4.3e-10 67.8 75 56.0
QL08p017373 Quercus lobata HOM05D000831 ORTHO05D000660 3.7e-09 64.7 73 53.4
QL08p017396 Quercus lobata HOM05D000831 ORTHO05D000660 3.7e-09 64.7 73 53.4
QL08p017375 Quercus lobata HOM05D000831 ORTHO05D000660 8.1e-09 63.5 73 52.1
QL08p017381 Quercus lobata HOM05D000831 ORTHO05D000660 8.1e-09 63.5 73 52.1
COL.COLO4_09492 Corchorus olitorius HOM05D000831 ORTHO05D000660 1.1e-08 63.2 75 52.0
MD11G1235300 Malus domestica HOM05D000831 ORTHO05D000660 1.1e-08 63.2 75 50.7
ClCG10G006440 Citrullus lanatus HOM05D000831 ORTHO05D000660 1.4e-08 62.8 75 49.3
COL.COLO4_09493 Corchorus olitorius HOM05D000831 ORTHO05D000660 1.8e-08 62.4 78 51.3
QL08p017355 Quercus lobata HOM05D000831 ORTHO05D000660 2.4e-08 62.0 73 50.7
Sopen07g028680 Solanum pennellii HOM05D000831 ORTHO05D000660 2.4e-08 62.0 71 50.7
QL08p017409 Quercus lobata HOM05D000831 ORTHO05D000660 3.1e-08 61.6 73 49.3
Sed0023804 Sechium edule HOM05D000831 ORTHO05D000660 3.1e-08 61.6 70 51.4
Haze_09537 Corylus avellana HOM05D000831 ORTHO05D000660 6.9e-08 60.5 74 50.0
MELO3C016562.2 Cucumis melo HOM05D000831 ORTHO05D000660 6.9e-08 60.5 75 49.3
CsaV3_3G005920 Cucumis sativus L. HOM05D000831 ORTHO05D000660 6.9e-08 60.5 71 50.7
MD11G1235200 Malus domestica HOM05D000831 ORTHO05D000660 6.9e-08 60.5 75 49.3
MELO3C018767.2 Cucumis melo HOM05D000831 ORTHO05D000660 1.2e-07 59.7 70 51.4
Solyc07g054750.1 Solanum lycopersicum HOM05D000831 ORTHO05D000660 1.2e-07 59.7 71 49.3
Thecc.07G069600 Theobroma cacao HOM05D000831 ORTHO05D000660 1.2e-07 59.7 76 51.3
CiPaw.11G177700 Carya illinoinensis HOM05D000831 ORTHO05D000660 1.5e-07 59.3 72 51.4
Duzib268G0103 Durio zibethinus HOM05D000831 ORTHO05D000660 1.5e-07 59.3 80 47.5
QL08p017428 Quercus lobata HOM05D000831 ORTHO05D000660 2.0e-07 58.9 73 49.3
QL08p037074 Quercus lobata HOM05D000831 ORTHO05D000660 2.0e-07 58.9 74 51.4
Medtr2g081155 Medicago truncatula HOM05D000831 ORTHO05D000660 3.4e-07 58.2 76 51.3
CANSAT11G2478 Cannabis sativa HOM05D000831 ORTHO05D000660 4.5e-07 57.8 75 46.7
PGSC0003DMG400018395 Solanum tuberosum HOM05D000831 ORTHO05D000660 4.5e-07 57.8 76 44.7
TAR629G0014 Trochodendron aralioides HOM05D000831 ORTHO05D000660 4.5e-07 57.8 74 51.4
CAN.G508.4 Capsicum annuum HOM05D000831 ORTHO05D000660 5.8e-07 57.4 72 50.0
Nitab4.5_0007263g0020 Nicotiana tabacum HOM05D000831 ORTHO05D000660 7.6e-07 57.0 71 47.9
Ah.06g183450 Amaranthus hybridus HOM05D000831 ORTHO05D000660 9.9e-07 56.6 57 57.9
Cc05_g06160 Coffea canephora HOM05D000831 ORTHO05D000660 9.9e-07 56.6 56 51.8
Atru.chr2.2924 Acer truncatum HOM05D000831 ORTHO05D000660 1.3e-06 56.2 81 43.2
CAN.G508.3 Capsicum annuum HOM05D000831 ORTHO05D000660 1.3e-06 56.2 72 48.6
Duzib213G0241 Durio zibethinus HOM05D000831 ORTHO05D000660 1.3e-06 56.2 76 47.4
Gohir.A03G160400 Gossypium hirsutum HOM05D000831 ORTHO05D000660 1.3e-06 56.2 72 48.6
Nitab4.5_0012449g0010 Nicotiana tabacum HOM05D000831 ORTHO05D000660 1.3e-06 56.2 70 50.0
QL08p037077 Quercus lobata HOM05D000831 ORTHO05D000660 1.3e-06 56.2 74 48.6
QL08p037097 Quercus lobata HOM05D000831 ORTHO05D000660 1.3e-06 56.2 74 48.6
PGSC0003DMG400018396 Solanum tuberosum HOM05D000831 ORTHO05D000660 1.3e-06 56.2 73 46.6
Gohir.D02G183500 Gossypium hirsutum HOM05D000831 ORTHO05D000660 1.7e-06 55.8 72 48.6
Gohir.D02G183700 Gossypium hirsutum HOM05D000831 ORTHO05D000660 1.7e-06 55.8 72 48.6
Gorai.005G205900 Gossypium raimondii HOM05D000831 ORTHO05D000660 1.7e-06 55.8 72 48.6
CiPaw.03G168900 Carya illinoinensis HOM05D000831 ORTHO05D000660 2.2e-06 55.5 74 44.6
CiPaw.03G169000 Carya illinoinensis HOM05D000831 ORTHO05D000660 2.2e-06 55.5 74 44.6
Gorai.005G206000 Gossypium raimondii HOM05D000831 ORTHO05D000660 2.2e-06 55.5 72 48.6
Nn1g00002 Nelumbo nucifera HOM05D000831 ORTHO05D000660 2.2e-06 55.5 71 47.9
Nn1g07821 Nelumbo nucifera HOM05D000831 ORTHO05D000660 2.2e-06 55.5 71 47.9
Nn1g07824 Nelumbo nucifera HOM05D000831 ORTHO05D000660 2.2e-06 55.5 71 47.9
Nitab4.5_0002791g0060 Nicotiana tabacum HOM05D000831 ORTHO05D000660 2.2e-06 55.5 71 47.9
Potri.019G116600 Populus trichocarpa HOM05D000831 ORTHO05D000660 2.2e-06 55.5 74 47.3
Potri.019G116866 Populus trichocarpa HOM05D000831 ORTHO05D000660 2.2e-06 55.5 73 45.2
COL.COLO4_13649 Corchorus olitorius HOM05D000831 ORTHO05D000660 2.9e-06 55.1 76 43.4
Duzib132G0142 Durio zibethinus HOM05D000831 ORTHO05D000660 3.8e-06 54.7 74 45.9
Prupe.3G228900 Prunus persica HOM05D000831 ORTHO05D000660 3.8e-06 54.7 74 50.0
PGR142G0205 Punica granatum HOM05D000831 ORTHO05D000660 3.8e-06 54.7 73 47.9
CAN.G508.9 Capsicum annuum HOM05D000831 ORTHO05D000660 4.9e-06 54.3 70 45.7
Potri.019G117201 Populus trichocarpa HOM05D000831 ORTHO05D000660 4.9e-06 54.3 74 48.6
CAN.G508.8 Capsicum annuum HOM05D000831 ORTHO05D000660 6.4e-06 53.9 74 44.6
COL.COLO4_13652 Corchorus olitorius HOM05D000831 ORTHO05D000660 6.4e-06 53.9 76 42.1
Dinv15499 Davidia involucrata HOM05D000831 ORTHO05D000660 6.4e-06 53.9 74 50.0
Duzib170G0486 Durio zibethinus HOM05D000831 ORTHO05D000660 6.4e-06 53.9 75 42.7
Nn1g07823 Nelumbo nucifera HOM05D000831 ORTHO05D000660 6.4e-06 53.9 71 47.9
Sed0008519 Sechium edule HOM05D000831 ORTHO05D000660 6.4e-06 53.9 70 50.0
Sopen07g028710 Solanum pennellii HOM05D000831 ORTHO05D000660 6.4e-06 53.9 75 49.3
Thecc.07G069500 Theobroma cacao HOM05D000831 ORTHO05D000660 6.4e-06 53.9 79 46.8
TAR629G0738 Trochodendron aralioides HOM05D000831 ORTHO05D000660 6.4e-06 53.9 74 50.0
Ah.06g183460 Amaranthus hybridus HOM05D000831 ORTHO05D000660 8.4e-06 53.5 57 54.4
CiPaw.03G169100 Carya illinoinensis HOM05D000831 ORTHO05D000660 8.4e-06 53.5 74 44.6
Ca_01542_v3 Cicer arietinum L. HOM05D000831 ORTHO05D000660 8.4e-06 53.5 72 45.8
COL.COLO4_13653 Corchorus olitorius HOM05D000831 ORTHO05D000660 8.4e-06 53.5 73 46.6
Duzib248G0958 Durio zibethinus HOM05D000831 ORTHO05D000660 8.4e-06 53.5 74 43.2
Duzib268G1469 Durio zibethinus HOM05D000831 ORTHO05D000660 8.4e-06 53.5 81 42.0
Sabra19G0118100 Salix brachista HOM05D000831 ORTHO05D000660 8.4e-06 53.5 73 46.6
Sabra19G0135500 Salix brachista HOM05D000831 ORTHO05D000660 8.4e-06 53.5 73 46.6
Sabra19G0135600 Salix brachista HOM05D000831 ORTHO05D000660 8.4e-06 53.5 73 46.6
Solyc07g054790.1 Solanum lycopersicum HOM05D000831 ORTHO05D000660 8.4e-06 53.5 75 48.0


User provided reference genes

Program Settings