Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p079831 Quercus lobata HOM05D015023 ORTHO05D004093 1.9e-158 562.4 274 100.0
QL09p017510 Quercus lobata HOM05D000003 ORTHO05D000004 1.4e-20 104.4 372 26.3
QL93p2025_0060 Quercus lobata HOM05D000003 ORTHO05D000004 4.2e-20 102.8 298 27.9
QL03p029989 Quercus lobata HOM05D000003 ORTHO05D000004 5.1e-18 95.9 93 50.5
QL05p047317 Quercus lobata HOM05D000003 ORTHO05D000004 4.3e-17 92.8 92 48.9
QL02p075237 Quercus lobata HOM05D015023 ORTHO05D014255 8.2e-16 88.6 131 40.5
QL93p1842_0109 Quercus lobata HOM05D015023 ORTHO05D014255 7.7e-14 82.0 141 38.3
QL06p043215 Quercus lobata HOM05D000529 ORTHO05D000472 3.8e-13 79.7 278 27.0
CANSAT11G1105 Cannabis sativa HOM05D000003 ORTHO05D000004 1.6e-11 74.3 291 25.8
QL02p065085 Quercus lobata HOM05D017229 ORTHO05D014255 1.6e-11 74.3 164 32.3
PSO063G6559 Papaver somniferum HOM05D000003 ORTHO05D000004 6.1e-11 72.4 98 38.8
QL07p019929 Quercus lobata HOM05D000003 ORTHO05D000004 1.4e-10 71.2 406 21.4
FvH4_3g29411 Fragaria vesca HOM05D000003 ORTHO05D000006 6.7e-10 68.9 168 30.4
FvH4_7g01171 Fragaria vesca HOM05D000003 ORTHO05D000004 6.7e-10 68.9 337 22.8
QL01p018547 Quercus lobata HOM05D015023 ORTHO05D014255 6.7e-10 68.9 80 42.5
PSO478G2405 Papaver somniferum HOM05D000003 ORTHO05D000004 3.3e-09 66.6 94 35.1
Aqoxy5G02730 Aquilegia oxysepala HOM05D000003 ORTHO05D008897 5.7e-09 65.9 317 24.0
FvH4_6g18902 Fragaria vesca HOM05D000003 ORTHO05D010713 5.7e-09 65.9 291 24.4
PSO675G9045 Papaver somniferum HOM05D000003 ORTHO05D000004 2.2e-08 63.9 143 30.8
PSO017G1042 Papaver somniferum HOM05D000003 ORTHO05D001026 4.8e-08 62.8 126 27.0
PSO063G1913 Papaver somniferum HOM05D000003 ORTHO05D000004 6.3e-08 62.4 305 21.3
QL04p082656 Quercus lobata HOM05D000003 ORTHO05D000167 6.3e-08 62.4 272 24.3
SGA_v2.0_scaffold244G44341 Striga asiatica HOM05D000003 ORTHO05D000004 8.2e-08 62.0 132 26.5
PSO384G4414 Papaver somniferum HOM05D000003 ORTHO05D000004 1.1e-07 61.6 92 33.7
PSO782G1426 Papaver somniferum HOM05D000003 ORTHO05D000004 1.1e-07 61.6 147 31.3
CANSAT25G2060 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-07 61.2 81 38.3
CiPaw.10G106100 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.4e-07 61.2 91 38.5
PSO782G5076 Papaver somniferum HOM05D000003 ORTHO05D000004 1.4e-07 61.2 93 31.2
TPR.G631 Trifolium pratense HOM05D000003 ORTHO05D000004 1.4e-07 61.2 168 22.6
Manes.06G094851 Manihot esculenta HOM05D000003 ORTHO05D000004 1.8e-07 60.8 181 28.7
Medtr8g099580 Medicago truncatula HOM05D000147 ORTHO05D004093 1.8e-07 60.8 203 24.6
SGA_v2.0_scaffold122G33296 Striga asiatica HOM05D000003 ORTHO05D000004 1.8e-07 60.8 167 24.0
Medtr2g084430 Medicago truncatula HOM05D020360 ORTHO05D019224 3.1e-07 60.1 92 34.8
PSO081G0047 Papaver somniferum HOM05D000003 ORTHO05D001026 3.1e-07 60.1 82 37.8
PSO541G5943 Papaver somniferum HOM05D000003 ORTHO05D001026 3.1e-07 60.1 98 33.7
SGA_v2.0_scaffold104G30166 Striga asiatica HOM05D000003 ORTHO05D000004 3.1e-07 60.1 82 31.7
Nn4g22089 Nelumbo nucifera HOM05D000003 ORTHO05D000004 4.1e-07 59.7 76 43.4
TPR.G7198 Trifolium pratense HOM05D000003 ORTHO05D000004 4.1e-07 59.7 87 34.5
Atru.chr5.2535 Acer truncatum HOM05D000003 ORTHO05D000004 5.3e-07 59.3 140 29.3
Nn1g02030 Nelumbo nucifera HOM05D000003 ORTHO05D004093 5.3e-07 59.3 76 40.8
CiPaw.05G068400 Carya illinoinensis HOM05D000003 ORTHO05D000004 6.9e-07 58.9 90 32.2
FvH4_6g17021 Fragaria vesca HOM05D000003 ORTHO05D000006 6.9e-07 58.9 167 25.7
PSO063G5048 Papaver somniferum HOM05D000003 ORTHO05D001026 6.9e-07 58.9 86 37.2
PSO170G3596 Papaver somniferum HOM05D000003 ORTHO05D000004 6.9e-07 58.9 105 30.5
PSO541G2576 Papaver somniferum HOM05D000003 ORTHO05D000004 6.9e-07 58.9 76 39.5
SGA_v2.0_scaffold22G09699 Striga asiatica HOM05D000003 ORTHO05D000004 6.9e-07 58.9 93 33.3
CANSAT11G2464 Cannabis sativa HOM05D000003 ORTHO05D009135 9.1e-07 58.5 268 25.0
CANSAT78G2405 Cannabis sativa HOM05D000003 ORTHO05D000004 9.1e-07 58.5 291 23.4
CiPaw.08G120100 Carya illinoinensis HOM05D000003 ORTHO05D000004 9.1e-07 58.5 89 36.0
PSO384G3167 Papaver somniferum HOM05D000003 ORTHO05D001026 9.1e-07 58.5 97 32.0
QL07p018488 Quercus lobata HOM05D000802 ORTHO05D004081 9.1e-07 58.5 251 24.7
QL07p038559 Quercus lobata HOM05D000003 ORTHO05D000167 9.1e-07 58.5 62 41.9
QL08p010467 Quercus lobata HOM05D017229 ORTHO05D014255 9.1e-07 58.5 95 40.0
CANSAT35G1450 Cannabis sativa HOM05D000003 ORTHO05D000004 1.2e-06 58.2 73 37.0
CANSAT80G2799 Cannabis sativa HOM05D000003 ORTHO05D000004 1.2e-06 58.2 81 37.0
CiPaw.03G196400 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.2e-06 58.2 92 34.8
PSO339G2402 Papaver somniferum HOM05D007919 ORTHO05D006738 1.2e-06 58.2 89 32.6
QL10p051120 Quercus lobata HOM05D000005 ORTHO05D000012 1.2e-06 58.2 144 31.2
Rhsim01G0076000 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.2e-06 58.2 93 36.6
Atru.chr2.314 Acer truncatum HOM05D000003 ORTHO05D000126 1.5e-06 57.8 77 37.7
CANSAT54G1512 Cannabis sativa HOM05D000003 ORTHO05D000004 1.5e-06 57.8 102 31.4
CiPaw.02G051300 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.5e-06 57.8 196 27.6
CiPaw.06G052300 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.5e-06 57.8 91 37.4
FvH4_3g25262 Fragaria vesca HOM05D000003 ORTHO05D000004 1.5e-06 57.8 167 30.5
Medtr1g033950 Medicago truncatula HOM05D000003 ORTHO05D012297 1.5e-06 57.8 93 32.3
Nn1g09365 Nelumbo nucifera HOM05D000003 ORTHO05D000004 1.5e-06 57.8 76 42.1
PSO210G6842 Papaver somniferum HOM05D000637 ORTHO05D001881 1.5e-06 57.8 76 35.5
Rhsim01G0174200 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.5e-06 57.8 97 33.0
SHI45994 Sapria himalayana HOM05D000003 ORTHO05D000004 1.5e-06 57.8 73 38.4
CANSAT11G1229 Cannabis sativa HOM05D000003 ORTHO05D000004 2.0e-06 57.4 150 27.3
CANSAT54G0984 Cannabis sativa HOM05D000003 ORTHO05D009135 2.0e-06 57.4 93 34.4
FvH4_1g26290 Fragaria vesca HOM05D000003 ORTHO05D010713 2.0e-06 57.4 86 39.5
Lj6P383T11 Lonicera japonica HOM05D000003 ORTHO05D000004 2.0e-06 57.4 86 32.6
PSO478G4051 Papaver somniferum HOM05D000003 ORTHO05D000004 2.0e-06 57.4 82 36.6
PSO675G5748 Papaver somniferum HOM05D000003 ORTHO05D000004 2.0e-06 57.4 92 28.3
QL04p006933 Quercus lobata HOM05D015023 ORTHO05D014255 2.0e-06 57.4 145 29.0
CANSAT78G1434 Cannabis sativa HOM05D000003 ORTHO05D000004 2.6e-06 57.0 85 30.6
CiPaw.14G089200 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.6e-06 57.0 95 35.8
CiPaw.15G073500 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.6e-06 57.0 86 38.4
Medtr8g031080 Medicago truncatula HOM05D000147 ORTHO05D004093 2.6e-06 57.0 66 42.4
PSO063G5397 Papaver somniferum HOM05D000003 ORTHO05D000004 2.6e-06 57.0 92 37.0
Atru.chr10.1454 Acer truncatum HOM05D000003 ORTHO05D000167 3.4e-06 56.6 86 33.7
RhsimUnG0010200 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.4e-06 56.6 94 35.1
RcHm_v2.0_Chr7g0236061 Rosa chinensis HOM05D000003 ORTHO05D000004 3.4e-06 56.6 92 32.6
CANSAT21G1229 Cannabis sativa HOM05D000003 ORTHO05D009135 4.5e-06 56.2 81 34.6
CANSAT54G2086 Cannabis sativa HOM05D000003 ORTHO05D000004 4.5e-06 56.2 185 24.9
PSO675G1801 Papaver somniferum HOM05D000003 ORTHO05D001026 4.5e-06 56.2 299 23.7
PSO675G8429 Papaver somniferum HOM05D000003 ORTHO05D001026 4.5e-06 56.2 104 26.9
PSO837G0049 Papaver somniferum HOM05D000003 ORTHO05D000004 4.5e-06 56.2 94 33.0
QL01p031677 Quercus lobata HOM05D000537 ORTHO05D000004 4.5e-06 56.2 95 34.7
QL03p033496 Quercus lobata HOM05D000003 ORTHO05D000004 4.5e-06 56.2 96 34.4
DCAR_028352 Daucus carota HOM05D000003 ORTHO05D000004 5.9e-06 55.8 74 33.8
FvH4_5g12241 Fragaria vesca HOM05D000003 ORTHO05D000004 5.9e-06 55.8 124 29.0
PSO063G3543 Papaver somniferum HOM05D000003 ORTHO05D000004 5.9e-06 55.8 88 31.8
TWI31G0724 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 5.9e-06 55.8 88 35.2
CANSAT78G1176 Cannabis sativa HOM05D000003 ORTHO05D000004 7.7e-06 55.5 94 29.8
FvH4_6g33631 Fragaria vesca HOM05D000003 ORTHO05D004145 7.7e-06 55.5 74 39.2
PSO541G3861 Papaver somniferum HOM05D000003 ORTHO05D000004 7.7e-06 55.5 89 33.7


User provided reference genes

Program Settings