Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p077228 Quercus lobata HOM05D007968 ORTHO05D010203 5.0e-91 337.8 176 100.0
CiPaw.11G064900 Carya illinoinensis HOM05D007968 ORTHO05D010203 2.7e-44 182.6 183 57.4
Cfa019410 Carpinus fangiana HOM05D007968 ORTHO05D010203 3.5e-44 182.2 177 57.6
Haze_07836 Corylus avellana HOM05D007968 ORTHO05D010203 1.3e-43 180.3 174 56.9
Thecc.07G160500 Theobroma cacao HOM05D007968 ORTHO05D010203 6.2e-33 144.8 173 46.2
TAR365G1166 Trochodendron aralioides HOM05D007968 ORTHO05D010203 3.1e-32 142.5 159 50.3
COL.COLO4_38368 Corchorus olitorius HOM05D007968 ORTHO05D010203 1.2e-31 140.6 173 45.1
Duzib213G0484 Durio zibethinus HOM05D007968 ORTHO05D010203 4.4e-31 138.7 173 43.9
Potri.007G068300 Populus trichocarpa HOM05D007968 ORTHO05D010203 1.3e-30 137.1 180 44.4
Sabra07G0056100 Salix brachista HOM05D007968 ORTHO05D010203 3.2e-29 132.5 172 41.9
Manes.14G011600 Manihot esculenta HOM05D007968 ORTHO05D010203 3.9e-27 125.6 177 40.7
Gohir.A11G292000 Gossypium hirsutum HOM05D007968 ORTHO05D010203 6.6e-27 124.8 150 45.3
Gohir.A11G291800 Gossypium hirsutum HOM05D007968 ORTHO05D010203 2.5e-26 122.9 174 43.1
Gorai.007G336400 Gossypium raimondii HOM05D007968 ORTHO05D010203 5.6e-26 121.7 154 42.9
Gohir.D11G300503 Gossypium hirsutum HOM05D007968 ORTHO05D010203 9.6e-26 120.9 154 42.9
Gorai.007G336600 Gossypium raimondii HOM05D007968 ORTHO05D010203 9.6e-26 120.9 172 42.4
Gohir.A11G291900 Gossypium hirsutum HOM05D007968 ORTHO05D010203 1.6e-25 120.2 151 44.4
Gohir.D11G300400 Gossypium hirsutum HOM05D007968 ORTHO05D010203 6.2e-25 118.2 171 41.5
CANSAT80G0444 Cannabis sativa HOM05D007968 ORTHO05D010203 1.5e-23 113.6 178 38.8
TWI38G1770 Tripterygium wilfordii HOM05D007968 ORTHO05D010203 2.6e-23 112.8 177 38.4
PSO761G0418 Papaver somniferum HOM05D007968 ORTHO05D010203 4.4e-23 112.1 184 42.4
THA.LOC104822174 Tarenaya hassleriana HOM05D007968 ORTHO05D010203 1.9e-21 106.7 171 37.4
PSO210G7553 Papaver somniferum HOM05D007968 ORTHO05D010203 3.2e-21 105.9 174 38.5
Glyma.08G168633 Glycine max HOM05D007968 ORTHO05D010203 4.2e-21 105.5 158 39.9
Prupe.4G137400 Prunus persica HOM05D007968 ORTHO05D010203 5.4e-21 105.1 143 45.5
Ciclev10006004m.g Citrus clementina HOM05D007968 ORTHO05D010203 7.1e-21 104.8 172 38.4
Actinidia07366 Actinidia chinensis HOM05D007968 ORTHO05D010203 2.7e-20 102.8 184 37.5
CARHR045840 Cardamine hirsuta HOM05D007968 ORTHO05D010203 2.7e-20 102.8 175 36.6
PSO447G0373 Papaver somniferum HOM05D007968 ORTHO05D010203 1.0e-19 100.9 179 35.8
Actinidia12776 Actinidia chinensis HOM05D007968 ORTHO05D010203 1.7e-19 100.1 177 35.0
AL6G52570 Arabidopsis lyrata HOM05D007968 ORTHO05D010203 3.9e-19 99.0 171 35.7
CARHR043880 Cardamine hirsuta HOM05D007968 ORTHO05D010203 6.6e-19 98.2 175 36.0
AT4G00872 Arabidopsis thaliana HOM05D007968 ORTHO05D010203 2.5e-18 96.3 168 36.3
Rhsim06G0240300 Rhododendron simsii HOM05D007968 ORTHO05D010203 5.6e-18 95.1 154 35.1
Carub.0001s4453 Capsella rubella HOM05D007968 ORTHO05D010203 6.2e-17 91.7 177 35.0
Carub.0006s3590 Capsella rubella HOM05D007968 ORTHO05D010203 1.4e-16 90.5 170 34.1
Thhalv10011943m.g Eutrema salsugineum HOM05D007968 ORTHO05D010203 1.4e-16 90.5 167 35.3
Aa31LG10G150 Aethionema arabicum HOM05D007968 ORTHO05D010203 4.0e-16 89.0 170 34.7
CARHR087400 Cardamine hirsuta HOM05D007968 ORTHO05D010203 9.0e-16 87.8 175 30.9
Sp1g41750 Schrenkiella parvula HOM05D007968 ORTHO05D010203 1.2e-15 87.4 180 35.6
AL1G64370 Arabidopsis lyrata HOM05D007968 ORTHO05D010203 4.5e-15 85.5 172 34.9
CARHR044320 Cardamine hirsuta HOM05D007968 ORTHO05D010203 4.5e-15 85.5 176 32.4
BcaB07g33167 Brassica carinata HOM05D007968 ORTHO05D010203 5.8e-15 85.1 172 34.3
BraSC56t46384Z Brassica rapa HOM05D007968 ORTHO05D010203 7.6e-15 84.7 181 33.1
Carub.0003s1224 Capsella rubella HOM05D007968 ORTHO05D010203 2.2e-14 83.2 174 28.7
Gorai.007G336500 Gossypium raimondii HOM05D007968 ORTHO05D010203 2.2e-14 83.2 136 39.0
Sp3g11020 Schrenkiella parvula HOM05D007968 ORTHO05D010203 3.8e-14 82.4 177 28.2
AT3G12880 Arabidopsis thaliana HOM05D007968 ORTHO05D010203 1.4e-13 80.5 178 29.2
Thhalv10022116m.g Eutrema salsugineum HOM05D007968 ORTHO05D010203 1.9e-13 80.1 175 28.6
BcaC08g43678 Brassica carinata HOM05D007968 ORTHO05D010203 2.4e-13 79.7 181 32.0
CARHR045850 Cardamine hirsuta HOM05D007968 ORTHO05D010203 3.2e-13 79.3 175 30.9
Atru.chr1.195 Acer truncatum HOM05D007968 ORTHO05D010203 4.2e-13 79.0 176 28.4
A05p36620 Brassica napus HOM05D007968 ORTHO05D010203 5.4e-13 78.6 180 30.0
BraA05t22464Z Brassica rapa HOM05D007968 ORTHO05D010203 5.4e-13 78.6 180 30.0
AL3G24550 Arabidopsis lyrata HOM05D007968 ORTHO05D010203 9.3e-13 77.8 174 27.6
BcaB06g25504 Brassica carinata HOM05D007968 ORTHO05D010203 1.2e-12 77.4 172 29.1
TAR365G0218 Trochodendron aralioides HOM05D007968 ORTHO05D010203 1.2e-12 77.4 157 33.8
BolC6t36179H Brassica oleracea HOM05D007968 ORTHO05D010203 1.6e-12 77.0 184 32.6
SGA_v2.0_scaffold49G18180 Striga asiatica HOM05D007968 ORTHO05D010203 2.1e-12 76.6 122 40.2
C06p10970 Brassica napus HOM05D007968 ORTHO05D010203 4.3e-10 68.9 178 32.0
AL7G39620 Arabidopsis lyrata HOM05D007968 ORTHO05D010203 6.9e-08 61.6 173 28.9
PSO541G6133 Papaver somniferum HOM05D007968 ORTHO05D010203 1.2e-07 60.8 178 29.8
AT1G56100 Arabidopsis thaliana HOM05D007968 ORTHO05D010203 2.0e-07 60.1 82 40.2
MBI13_g00568_MAGBIO Magnolia biondii HOM05D004113 ORTHO05D001819 2.6e-07 59.7 121 32.2
Actinidia18484 Actinidia chinensis HOM05D003146 ORTHO05D001819 1.7e-06 57.0 103 31.1
PSO210G1810 Papaver somniferum HOM05D007968 ORTHO05D010203 2.2e-06 56.6 107 37.4
Sed0017979 Sechium edule HOM05D019571 ORTHO05D012329 2.9e-06 56.2 99 35.4
Nn2g14817 Nelumbo nucifera HOM05D012307 ORTHO05D012329 8.4e-06 54.7 127 30.7


User provided reference genes

Program Settings