Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p076191 Quercus lobata HOM05D006956 ORTHO05D008824 5.6e-68 260.8 128 100.0
QL93p0133_0021 Quercus lobata HOM05D006956 ORTHO05D008824 5.6e-68 260.8 128 100.0
QL04p076576 Quercus lobata HOM05D006956 ORTHO05D008824 1.5e-65 252.7 128 97.7
Cfa010806 Carpinus fangiana HOM05D006956 ORTHO05D008824 1.2e-54 216.5 128 82.8
Dinv19614 Davidia involucrata HOM05D006956 ORTHO05D008824 1.2e-54 216.5 128 80.5
Sabra16G0296900 Salix brachista HOM05D006956 ORTHO05D008824 6.0e-54 214.2 128 79.7
CiPaw.11G066300 Carya illinoinensis HOM05D006956 ORTHO05D008824 1.0e-53 213.4 128 81.2
CSS0020916 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 3.9e-53 211.5 127 76.4
Haze_03154 Corylus avellana HOM05D006956 ORTHO05D008824 6.7e-53 210.7 128 79.7
Potri.001G439000 Populus trichocarpa HOM05D006956 ORTHO05D008824 3.3e-52 208.4 128 78.1
Rhsim04G0005600 Rhododendron simsii HOM05D006956 ORTHO05D008824 4.3e-52 208.0 128 77.3
MD10G1203100 Malus domestica HOM05D006956 ORTHO05D008824 3.7e-51 204.9 127 76.4
TWI39G0297 Tripterygium wilfordii HOM05D006956 ORTHO05D008824 8.2e-51 203.8 128 74.2
CSS0000379 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 1.1e-50 203.4 129 74.4
Prupe.4G139000 Prunus persica HOM05D006956 ORTHO05D008824 1.4e-50 203.0 127 76.4
TAR362G0399 Trochodendron aralioides HOM05D006956 ORTHO05D008824 2.4e-50 202.2 127 76.4
Cc05_g16140 Coffea canephora HOM05D006956 ORTHO05D008824 3.1e-50 201.8 129 76.0
COL.COLO4_07377 Corchorus olitorius HOM05D006956 ORTHO05D008824 3.1e-50 201.8 127 77.2
Nn7g38051 Nelumbo nucifera HOM05D006956 ORTHO05D008824 3.1e-50 201.8 126 73.8
Hma1.2p1_0334F.1_g128720 Hydrangea macrophylla HOM05D006956 ORTHO05D008824 6.9e-50 200.7 128 74.2
Medtr2g069340 Medicago truncatula HOM05D006956 ORTHO05D008824 4.5e-49 198.0 125 73.6
Gohir.A11G291500 Gossypium hirsutum HOM05D006956 ORTHO05D008824 5.8e-49 197.6 125 75.2
vmacro00957 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 7.6e-49 197.2 128 74.2
Phvul.005G057800 Phaseolus vulgaris HOM05D006956 ORTHO05D008824 1.3e-48 196.4 125 74.4
Gorai.007G335600 Gossypium raimondii HOM05D006956 ORTHO05D008824 1.7e-48 196.1 125 74.4
MBI18_g45405_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 1.7e-48 196.1 126 75.4
Psat1g012040 Pisum sativum HOM05D006956 ORTHO05D008824 1.7e-48 196.1 124 73.4
Thecc.07G151600 Theobroma cacao HOM05D006956 ORTHO05D008824 1.7e-48 196.1 127 75.6
TPR.G9744 Trifolium pratense HOM05D006956 ORTHO05D008824 1.7e-48 196.1 125 72.8
Atru.chr9.1519 Acer truncatum HOM05D006956 ORTHO05D008824 6.5e-48 194.1 128 71.1
Lalb_Chr20g0108711 Lupinus albus HOM05D006956 ORTHO05D008824 8.4e-48 193.7 125 72.8
CANSAT54G1214 Cannabis sativa HOM05D006956 ORTHO05D008824 1.4e-47 193.0 124 75.8
FvH4_3g15651 Fragaria vesca HOM05D006956 ORTHO05D008824 1.4e-47 193.0 128 71.9
Lj3g0016125 Lotus japonicus HOM05D006956 ORTHO05D008824 1.4e-47 193.0 125 73.6
Lj3g0018815 Lotus japonicus HOM05D006956 ORTHO05D008824 1.4e-47 193.0 125 72.8
MSTRG.13068 Avicennia marina HOM05D006956 ORTHO05D008824 1.9e-47 192.6 127 73.2
Ca_03670_v3 Cicer arietinum L. HOM05D006956 ORTHO05D008824 3.2e-47 191.8 125 72.0
FAN11G3326 Fragaria x ananassa HOM05D006956 ORTHO05D008824 4.2e-47 191.4 128 71.1
VMungo1080G0523 Vigna mungo HOM05D006956 ORTHO05D008824 5.5e-47 191.0 125 72.8
Glyma.15G256600 Glycine max HOM05D006956 ORTHO05D008824 9.3e-47 190.3 125 72.0
Manes.06G172400 Manihot esculenta HOM05D006956 ORTHO05D008824 1.6e-46 189.5 130 72.3
Solyc09g098220.3 Solanum lycopersicum HOM05D006956 ORTHO05D008824 1.6e-46 189.5 127 70.9
Sopen09g036160 Solanum pennellii HOM05D006956 ORTHO05D008824 1.6e-46 189.5 127 70.9
MELO3C019670.2 Cucumis melo HOM05D006956 ORTHO05D008824 2.1e-46 189.1 126 70.6
PGR142G1185 Punica granatum HOM05D006956 ORTHO05D008824 3.5e-46 188.3 127 72.4
PGSC0003DMG400014067 Solanum tuberosum HOM05D006956 ORTHO05D008466 3.5e-46 188.3 127 70.1
Sp1g14740 Schrenkiella parvula HOM05D006956 ORTHO05D008824 4.6e-46 188.0 128 66.4
Peaxi162Scf00286g00448 Petunia axillaris HOM05D006956 ORTHO05D008824 6.1e-46 187.6 127 70.1
FAN21G1707 Fragaria x ananassa HOM05D006956 ORTHO05D008824 7.9e-46 187.2 128 69.5
CAN.G710.39 Capsicum annuum HOM05D006956 ORTHO05D008824 1.0e-45 186.8 128 70.3
ClCG02G018480 Citrullus lanatus HOM05D006956 ORTHO05D008824 3.0e-45 185.3 128 66.4
Thhalv10008810m.g Eutrema salsugineum HOM05D006956 ORTHO05D008824 5.1e-45 184.5 126 66.7
BolC8t51982H Brassica oleracea HOM05D006956 ORTHO05D008824 6.7e-45 184.1 128 65.6
CsaV3_6G013760 Cucumis sativus L. HOM05D006956 ORTHO05D008824 6.7e-45 184.1 127 70.1
Migut.H01688 Erythranthe guttata HOM05D006956 ORTHO05D008824 6.7e-45 184.1 127 69.3
Sc08g0007560 Simmondsia chinensis HOM05D006956 ORTHO05D008824 8.7e-45 183.7 127 68.5
RcHm_v2.0_Chr5g0026331 Rosa chinensis HOM05D006956 ORTHO05D008824 1.5e-44 183.0 128 68.0
A09p60820 Brassica napus HOM05D006956 ORTHO05D008824 1.9e-44 182.6 128 64.1
BraA09t41455Z Brassica rapa HOM05D006956 ORTHO05D008824 1.9e-44 182.6 128 64.1
AT1G16590 Arabidopsis thaliana HOM05D006956 ORTHO05D008824 3.3e-44 181.8 126 65.1
Ciclev10022296m.g Citrus clementina HOM05D006956 ORTHO05D008824 7.4e-44 180.6 125 69.6
Aa31LG7G1120 Aethionema arabicum HOM05D006956 ORTHO05D008824 9.7e-44 180.3 126 66.7
C08p44410 Brassica napus HOM05D006956 ORTHO05D008824 1.3e-43 179.9 125 64.8
SGA_v2.0_scaffold49G18176 Striga asiatica HOM05D006956 ORTHO05D008824 1.6e-43 179.5 126 68.3
Carub.0001s1634 Capsella rubella HOM05D006956 ORTHO05D008824 4.8e-43 177.9 125 64.0
arahy.Tifrunner.gnm1.ann1.82TPB7 Arachis hypogaea HOM05D006956 ORTHO05D008824 6.3e-43 177.6 125 66.4
SalBow5G4858 Salvia bowleyana HOM05D006956 ORTHO05D008824 6.3e-43 177.6 127 65.4
arahy.Tifrunner.gnm1.ann1.JC2BA5 Arachis hypogaea HOM05D006956 ORTHO05D008824 8.2e-43 177.2 125 65.6
Eucgr.A00498 Eucalyptus grandis HOM05D006956 ORTHO05D008824 1.1e-42 176.8 125 66.4
Aqoxy1G01495 Aquilegia oxysepala HOM05D006956 ORTHO05D008824 1.4e-42 176.4 128 65.6
AL1G28750 Arabidopsis lyrata HOM05D006956 ORTHO05D008824 2.4e-42 175.6 126 65.1
CARHR017060 Cardamine hirsuta HOM05D006956 ORTHO05D008824 3.4e-41 171.8 125 62.4
Nitab4.5_0001526g0100 Nicotiana tabacum HOM05D006956 ORTHO05D008824 5.9e-41 171.0 152 57.9
THA.LOC104808124 Tarenaya hassleriana HOM05D006956 ORTHO05D008824 1.7e-40 169.5 124 63.7
AUR62042418 Chenopodium quinoa HOM05D006956 ORTHO05D008824 2.9e-40 168.7 124 65.3
HPP92_011671 Vanilla planifolia HOM05D006956 ORTHO05D008824 8.5e-40 167.2 127 59.1
AUR62026907 Chenopodium quinoa HOM05D006956 ORTHO05D008824 1.9e-39 166.0 124 64.5
Cfa010808 Carpinus fangiana HOM05D006956 ORTHO05D008824 3.2e-39 165.2 104 78.8
Zm00001eb198240 Zea mays HOM05D006956 ORTHO05D008824 1.0e-37 160.2 127 59.1
CDE05G1956 Ceratophyllum demersum HOM05D003342 ORTHO05D003861 1.5e-36 156.4 126 61.9
GSVIVG01020406001 Vitis vinifera HOM05D006956 ORTHO05D008824 1.5e-36 156.4 99 75.8
PSO223G0077 Papaver somniferum HOM05D006956 ORTHO05D008824 4.1e-34 148.3 126 60.3
PSO210G3417 Papaver somniferum HOM05D006956 ORTHO05D008824 2.6e-33 145.6 125 59.2
Prupe.4G139100 Prunus persica HOM05D006956 ORTHO05D008824 4.5e-33 144.8 97 73.2
HanXRQChr08g0231891 Helianthus annuus HOM05D006956 ORTHO05D008824 7.7e-33 144.1 127 61.4
SEGI_37897 Sequoiadendron giganteum HOM05D006956 ORTHO05D008824 1.7e-32 142.9 127 57.5
ECA247G3084 Erigeron canadensis HOM05D006956 ORTHO05D008824 1.2e-30 136.7 129 55.8
Lsat_1_v5_gn_6_63040 Lactuca sativa HOM05D006956 ORTHO05D008824 2.6e-25 119.0 129 51.9
Potri.011G142501 Populus trichocarpa HOM05D006956 ORTHO05D008824 2.6e-25 119.0 89 68.5
vmacro09782 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 1.7e-24 116.3 64 79.7
Sed0013658 Sechium edule HOM05D006956 ORTHO05D008824 5.5e-23 111.3 78 71.8
AagrBONN_evm.TU.Sc2ySwM_368.712 Anthoceros agrestis HOM05D006956 ORTHO05D008824 2.1e-22 109.4 124 46.8
RcHm_v2.0_Chr5g0026311 Rosa chinensis HOM05D006956 ORTHO05D008824 6.7e-21 104.4 81 60.5
SMO340G0149 Selaginella moellendorffii HOM05D006956 ORTHO05D008824 1.5e-20 103.2 123 39.8
MD05G1220700 Malus domestica HOM05D006956 ORTHO05D008824 1.1e-18 97.1 63 73.0
RcHm_v2.0_Chr5g0031421 Rosa chinensis HOM05D006956 ORTHO05D008824 1.8e-18 96.3 110 55.5
MD17G1180100 Malus domestica HOM05D006956 ORTHO05D008824 7.7e-17 90.9 63 71.4
Pp3c4_6830 Physcomitrium patens HOM05D006956 ORTHO05D008824 8.5e-16 87.4 126 39.7
Cpa.g.sc67.70 Carica papaya HOM05D006956 ORTHO05D008824 3.2e-15 85.5 63 65.1
Pp3c4_6840 Physcomitrium patens HOM05D006956 ORTHO05D008824 3.2e-15 85.5 126 36.5
FAN25G3578 Fragaria x ananassa HOM05D006956 ORTHO05D008824 1.0e-13 80.5 63 61.9
Actinidia35432 Actinidia chinensis HOM05D006956 ORTHO05D008824 2.3e-13 79.3 62 64.5
Prupe.4G141800 Prunus persica HOM05D006956 ORTHO05D008824 2.3e-13 79.3 55 69.1
Lalb_Chr25g0284921 Lupinus albus HOM05D006956 ORTHO05D008824 5.2e-13 78.2 62 61.3
vmacro22747 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 3.4e-12 75.5 40 77.5
Lju41A37T47 Lonicera japonica HOM05D006956 ORTHO05D008824 6.3e-11 71.2 44 77.3
Glyma.08G170300 Glycine max HOM05D006956 ORTHO05D008824 1.1e-10 70.5 125 36.0
Mapoly0023s0023 Marchantia polymorpha HOM05D006956 ORTHO05D008824 3.1e-10 68.9 62 53.2
SHI21449 Sapria himalayana HOM05D000257 ORTHO05D008466 5.9e-09 64.7 40 62.5
SGA_v2.0_scaffold62G21353 Striga asiatica HOM05D058974 ORTHO05D402092 6.1e-06 54.7 33 78.8


User provided reference genes

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