Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p073045 Quercus lobata HOM05D006189 ORTHO05D007765 2.0e-86 322.4 160 100.0
QL04p094121 Quercus lobata HOM05D000839 ORTHO05D000664 1.2e-19 100.5 111 60.4
Atru.chr10.686 Acer truncatum HOM05D006189 ORTHO05D007765 2.1e-19 99.8 51 92.2
Sabra11G0142800 Salix brachista HOM05D006189 ORTHO05D007765 2.7e-19 99.4 59 81.4
CsaV3_1G037630 Cucumis sativus L. HOM05D006189 ORTHO05D007765 3.5e-19 99.0 103 55.3
Sc24g0002570 Simmondsia chinensis HOM05D006189 ORTHO05D007765 3.5e-19 99.0 51 90.2
CSS0031891 Camellia sinensis var. sinensis HOM05D006189 ORTHO05D007765 6.0e-19 98.2 51 92.2
CiPaw.09G147800 Carya illinoinensis HOM05D006189 ORTHO05D007765 7.9e-19 97.8 51 90.2
TAR626G0344 Trochodendron aralioides HOM05D006189 ORTHO05D007765 7.9e-19 97.8 51 90.2
Eucgr.D01017 Eucalyptus grandis HOM05D006189 ORTHO05D007765 1.0e-18 97.4 51 88.2
ECA234G0756 Erigeron canadensis HOM05D006189 ORTHO05D007765 1.3e-18 97.1 51 88.2
Actinidia29243 Actinidia chinensis HOM05D006189 ORTHO05D007765 1.8e-18 96.7 51 90.2
CANSAT35G1316 Cannabis sativa HOM05D006189 ORTHO05D007765 1.8e-18 96.7 99 50.5
Cc09_g07340 Coffea canephora HOM05D006189 ORTHO05D007765 1.8e-18 96.7 51 88.2
Manes.14G126200 Manihot esculenta HOM05D006189 ORTHO05D007765 1.8e-18 96.7 51 88.2
Thecc.06G008600 Theobroma cacao HOM05D006189 ORTHO05D007765 1.8e-18 96.7 51 90.2
Dinv06442 Davidia involucrata HOM05D006189 ORTHO05D007765 2.3e-18 96.3 51 90.2
MBI18_g27139_MAGBIO Magnolia biondii HOM05D006189 ORTHO05D007765 2.3e-18 96.3 51 84.3
Cfa000769 Carpinus fangiana HOM05D006189 ORTHO05D007765 3.0e-18 95.9 51 88.2
QL04p073052 Quercus lobata HOM05D006189 ORTHO05D007765 3.0e-18 95.9 51 88.2
Duzib235G1073 Durio zibethinus HOM05D006189 ORTHO05D007765 3.9e-18 95.5 51 88.2
Migut.M01928 Erythranthe guttata HOM05D006189 ORTHO05D007765 3.9e-18 95.5 51 86.3
Hma1.2p1_1192F.1_g265520 Hydrangea macrophylla HOM05D006189 ORTHO05D007765 3.9e-18 95.5 51 88.2
Hma1.2p1_1192F.1_g265540 Hydrangea macrophylla HOM05D006189 ORTHO05D007765 3.9e-18 95.5 51 88.2
vmacro03465 Vaccinium macrocarpon HOM05D006189 ORTHO05D007765 3.9e-18 95.5 51 88.2
GSVIVG01021771001 Vitis vinifera HOM05D006189 ORTHO05D007765 3.9e-18 95.5 51 88.2
Carub.0007s2069 Capsella rubella HOM05D006189 ORTHO05D007765 5.1e-18 95.1 51 86.3
COL.COLO4_26883 Corchorus olitorius HOM05D006189 ORTHO05D007765 5.1e-18 95.1 51 88.2
Haze_05946 Corylus avellana HOM05D006189 ORTHO05D007765 6.7e-18 94.7 51 86.3
FAN21G1916 Fragaria x ananassa HOM05D006189 ORTHO05D007765 6.7e-18 94.7 51 84.3
HanXRQChr10g0296271 Helianthus annuus HOM05D006189 ORTHO05D007765 6.7e-18 94.7 51 86.3
Potri.011G157300 Populus trichocarpa HOM05D006189 ORTHO05D007765 6.7e-18 94.7 51 88.2
RcHm_v2.0_Chr5g0018051 Rosa chinensis HOM05D006189 ORTHO05D007765 6.7e-18 94.7 51 86.3
Cpa.g.c30210.1 Carica papaya HOM05D006189 ORTHO05D007765 8.7e-18 94.4 51 84.3
ClCG03G008560 Citrullus lanatus HOM05D006189 ORTHO05D007765 8.7e-18 94.4 51 86.3
FvH4_3g11150 Fragaria vesca HOM05D006189 ORTHO05D007765 8.7e-18 94.4 51 84.3
FAN16G1953 Fragaria x ananassa HOM05D006189 ORTHO05D007765 8.7e-18 94.4 51 84.3
FAN25G1707 Fragaria x ananassa HOM05D006189 ORTHO05D007765 8.7e-18 94.4 51 84.3
Sed0000978 Sechium edule HOM05D006189 ORTHO05D007765 8.7e-18 94.4 51 86.3
AL7G33390 Arabidopsis lyrata HOM05D006189 ORTHO05D007765 1.5e-17 93.6 51 84.3
DCAR_005641 Daucus carota HOM05D006189 ORTHO05D007765 1.5e-17 93.6 55 78.2
Thhalv10025851m.g Eutrema salsugineum HOM05D006189 ORTHO05D007765 1.5e-17 93.6 51 84.3
Lsat_1_v5_gn_5_148401 Lactuca sativa HOM05D006189 ORTHO05D007765 1.5e-17 93.6 51 82.4
Prupe.4G101000 Prunus persica HOM05D006189 ORTHO05D007765 1.5e-17 93.6 51 86.3
Rhsim13G0125300 Rhododendron simsii HOM05D006189 ORTHO05D007765 1.5e-17 93.6 51 88.2
Sp7g18830 Schrenkiella parvula HOM05D006189 ORTHO05D007765 1.5e-17 93.6 51 84.3
AT4G20760 Arabidopsis thaliana HOM05D006189 ORTHO05D007765 2.5e-17 92.8 51 82.4
EL10Ac9g22332 Beta vulgaris HOM05D006189 ORTHO05D007765 2.5e-17 92.8 51 84.3
Gohir.D02G105200 Gossypium hirsutum HOM05D006189 ORTHO05D007765 2.5e-17 92.8 51 86.3
MD10G1243100 Malus domestica HOM05D006189 ORTHO05D007765 2.5e-17 92.8 51 84.3
Hund17667 Selenicereus undatus HOM05D006189 ORTHO05D007765 2.5e-17 92.8 51 84.3
CARHR227300 Cardamine hirsuta HOM05D006189 ORTHO05D007765 3.3e-17 92.4 51 82.4
PSO541G1785 Papaver somniferum HOM05D006189 ORTHO05D007765 3.3e-17 92.4 51 84.3
PSO675G7004 Papaver somniferum HOM05D006189 ORTHO05D007765 3.3e-17 92.4 51 84.3
BcaNung04155 Brassica carinata HOM05D006189 ORTHO05D007765 4.3e-17 92.0 51 82.4
A01p12170 Brassica napus HOM05D006189 ORTHO05D007765 4.3e-17 92.0 51 82.4
C01p14490 Brassica napus HOM05D006189 ORTHO05D007765 4.3e-17 92.0 51 82.4
BraA01t01159Z Brassica rapa HOM05D006189 ORTHO05D007765 4.3e-17 92.0 51 82.4
MELO3C002872.2 Cucumis melo HOM05D006189 ORTHO05D007765 4.3e-17 92.0 51 82.4
Aa31LG6G2850 Aethionema arabicum HOM05D006189 ORTHO05D007765 5.6e-17 91.7 51 80.4
CDE02G4463 Ceratophyllum demersum HOM05D006189 ORTHO05D007765 5.6e-17 91.7 118 50.0
Nn7g37778 Nelumbo nucifera HOM05D006189 ORTHO05D007765 9.6e-17 90.9 51 82.4
BcaC09g51315 Brassica carinata HOM05D006189 ORTHO05D007765 1.3e-16 90.5 51 82.4
BolC1t01404H Brassica oleracea HOM05D006189 ORTHO05D007765 1.3e-16 90.5 51 82.4
Gohir.A03G088500 Gossypium hirsutum HOM05D006189 ORTHO05D007765 1.3e-16 90.5 51 84.3
Gorai.005G119400 Gossypium raimondii HOM05D006189 ORTHO05D007765 1.3e-16 90.5 51 84.3
TWI38G1238 Tripterygium wilfordii HOM05D006189 ORTHO05D007765 1.3e-16 90.5 78 60.3
Lj6g0027485 Lotus japonicus HOM05D006189 ORTHO05D007765 2.1e-16 89.7 51 82.4
ATR0763G139 Amborella trichopoda HOM05D006189 ORTHO05D007765 3.7e-16 89.0 51 82.4
Aqoxy1G01513 Aquilegia oxysepala HOM05D006189 ORTHO05D007765 3.7e-16 89.0 51 78.4
arahy.Tifrunner.gnm1.ann1.4Q5DUA Arachis hypogaea HOM05D006189 ORTHO05D007765 3.7e-16 89.0 51 82.4
arahy.Tifrunner.gnm1.ann1.HZ123V Arachis hypogaea HOM05D006189 ORTHO05D007765 3.7e-16 89.0 51 82.4
CAN.G565.1 Capsicum annuum HOM05D006189 ORTHO05D007765 3.7e-16 89.0 55 72.7
CDE02G2479 Ceratophyllum demersum HOM05D006189 ORTHO05D007765 3.7e-16 89.0 51 80.4
Ciclev10016184m.g Citrus clementina HOM05D006189 ORTHO05D007765 3.7e-16 89.0 55 83.6
SalBow8G0058 Salvia bowleyana HOM05D006189 ORTHO05D007765 3.7e-16 89.0 51 76.5
SalBow8G0354 Salvia bowleyana HOM05D006189 ORTHO05D007765 3.7e-16 89.0 51 76.5
Nitab4.5_0002819g0010 Nicotiana tabacum HOM05D006189 ORTHO05D007765 4.8e-16 88.6 51 78.4
Ca_00927_v3 Cicer arietinum L. HOM05D006189 ORTHO05D007765 6.2e-16 88.2 51 82.4
Phvul.006G123300 Phaseolus vulgaris HOM05D006189 ORTHO05D007765 6.2e-16 88.2 51 82.4
PGSC0003DMG400028033 Solanum tuberosum HOM05D006189 ORTHO05D007765 6.2e-16 88.2 51 76.5
Glyma.15G135500 Glycine max HOM05D006189 ORTHO05D007765 1.1e-15 87.4 51 82.4
Solyc02g023990.3 Solanum lycopersicum HOM05D006189 ORTHO05D007765 1.1e-15 87.4 51 76.5
Sopen02g006700 Solanum pennellii HOM05D006189 ORTHO05D007765 1.1e-15 87.4 51 76.5
TPR.G8020 Trifolium pratense HOM05D006189 ORTHO05D007765 1.1e-15 87.4 51 80.4
Nitab4.5_0010673g0010 Nicotiana tabacum HOM05D006189 ORTHO05D007765 1.4e-15 87.0 51 76.5
HPP92_015693 Vanilla planifolia HOM05D006189 ORTHO05D007765 1.4e-15 87.0 51 78.4
PSO541G6221 Papaver somniferum HOM05D006189 ORTHO05D007765 1.8e-15 86.7 51 78.4
VMungo0540G1817 Vigna mungo HOM05D006189 ORTHO05D007765 1.8e-15 86.7 51 80.4
Glyma.09G029700 Glycine max HOM05D006189 ORTHO05D007765 2.4e-15 86.3 51 80.4
Medtr2g031990 Medicago truncatula HOM05D006189 ORTHO05D007765 2.4e-15 86.3 51 80.4
Oeu063153.2 Olea europaea HOM05D006189 ORTHO05D007765 2.4e-15 86.3 51 76.5
Psat1g164320 Pisum sativum HOM05D006189 ORTHO05D007765 3.1e-15 85.9 51 78.4
SEGI_07893 Sequoiadendron giganteum HOM05D006189 ORTHO05D007765 4.0e-15 85.5 51 74.5
AUR62027598 Chenopodium quinoa HOM05D006189 ORTHO05D007765 6.9e-15 84.7 51 78.4
AUR62030247 Chenopodium quinoa HOM05D006189 ORTHO05D007765 9.0e-15 84.3 51 78.4
MSTRG.16306 Avicennia marina HOM05D006189 ORTHO05D007765 1.2e-14 84.0 51 72.5
SGA_v2.0_scaffold1G00293 Striga asiatica HOM05D006189 ORTHO05D007765 1.2e-14 84.0 55 69.1
Lalb_Chr18g0058331 Lupinus albus HOM05D006189 ORTHO05D007765 2.0e-14 83.2 51 76.5
TPR.G21393 Trifolium pratense HOM05D006189 ORTHO05D007765 3.4e-14 82.4 51 76.5
Lj2A337T31 Lonicera japonica HOM05D006189 ORTHO05D007765 1.0e-13 80.9 55 74.5
Mapoly0158s0008 Marchantia polymorpha HOM05D006189 ORTHO05D007765 2.9e-13 79.3 51 72.5
Zm00001eb031410 Zea mays HOM05D006189 ORTHO05D007765 4.9e-13 78.6 55 63.6
Os12g0609500 Oryza sativa ssp. japonica HOM05D006189 ORTHO05D007765 8.4e-13 77.8 51 68.6
AagrBONN_evm.TU.Sc2ySwM_228.1434 Anthoceros agrestis HOM05D006189 ORTHO05D007765 1.1e-12 77.4 51 70.6
QL10p000700 Quercus lobata HOM05D001362 ORTHO05D001310 1.0e-10 70.9 72 62.5
Pp3c10_7720 Physcomitrium patens HOM05D006189 ORTHO05D007765 1.3e-10 70.5 51 64.7
PRCOL_00006144 Prasinoderma coloniale HOM05D006189 ORTHO05D007765 1.8e-10 70.1 106 43.4
SMO116G0118 Selaginella moellendorffii HOM05D006189 ORTHO05D007765 6.7e-10 68.2 51 68.6
unitig_92.g28182 Utricularia gibba HOM05D006189 ORTHO05D007765 2.5e-09 66.2 38 81.6
arahy.Tifrunner.gnm1.ann1.5RXD5Y Arachis hypogaea HOM05D006189 ORTHO05D007765 1.8e-07 60.1 37 78.4
MCO04G545 Micromonas commoda HOM05D006189 ORTHO05D007765 6.9e-07 58.2 33 81.8


User provided reference genes

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