Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p071625 Quercus lobata HOM05D004833 ORTHO05D005671 2.0e-151 539.3 311 100.0
QL06p016027 Quercus lobata HOM05D004833 ORTHO05D005671 1.1e-64 251.1 477 40.3
CiPaw.02G115600 Carya illinoinensis HOM05D004833 ORTHO05D005671 3.5e-55 219.5 401 45.4
Cfa008364 Carpinus fangiana HOM05D004833 ORTHO05D005671 8.1e-52 208.4 492 35.2
Manes.03G168000 Manihot esculenta HOM05D004833 ORTHO05D005671 2.3e-43 180.3 392 36.7
MD16G1211500 Malus domestica HOM05D004833 ORTHO05D005671 3.4e-42 176.4 409 34.5
Potri.010G074900 Populus trichocarpa HOM05D004833 ORTHO05D005671 9.9e-42 174.9 390 36.7
Duzib212G0317 Durio zibethinus HOM05D004833 ORTHO05D005671 2.9e-41 173.3 359 38.4
Prupe.1G033600 Prunus persica HOM05D004833 ORTHO05D005671 4.9e-41 172.6 441 34.0
Sabra10G0033900 Salix brachista HOM05D004833 ORTHO05D005671 1.4e-40 171.0 382 37.7
CANSAT78G0301 Cannabis sativa HOM05D004833 ORTHO05D005671 5.4e-40 169.1 337 41.2
MELO3C006459.2 Cucumis melo HOM05D004833 ORTHO05D005671 1.2e-39 167.9 414 34.3
Gorai.005G047200 Gossypium raimondii HOM05D004833 ORTHO05D005671 3.5e-39 166.4 368 35.9
Gohir.D02G042900 Gossypium hirsutum HOM05D004833 ORTHO05D005671 1.3e-38 164.5 371 35.3
Sed0021810 Sechium edule HOM05D004833 ORTHO05D005671 2.3e-38 163.7 396 33.8
CsaV3_3G012480 Cucumis sativus L. HOM05D004833 ORTHO05D005671 8.6e-38 161.8 414 33.6
Thecc.04G248100 Theobroma cacao HOM05D004833 ORTHO05D005671 1.5e-37 161.0 410 33.4
ClCG05G004520 Citrullus lanatus HOM05D004833 ORTHO05D005671 1.9e-37 160.6 414 34.3
Gohir.A02G036200 Gossypium hirsutum HOM05D004833 ORTHO05D005671 2.5e-37 160.2 368 36.1
TWI09G0514 Tripterygium wilfordii HOM05D004833 ORTHO05D005671 4.3e-37 159.5 369 33.3
Rhsim11G0181500 Rhododendron simsii HOM05D004833 ORTHO05D005671 5.6e-37 159.1 405 34.6
RcHm_v2.0_Chr4g0391131 Rosa chinensis HOM05D004833 ORTHO05D005671 2.8e-36 156.8 279 41.9
TWI53G1508 Tripterygium wilfordii HOM05D004833 ORTHO05D005671 1.1e-35 154.8 368 31.5
TWI53G1633 Tripterygium wilfordii HOM05D004833 ORTHO05D005671 1.1e-35 154.8 368 31.5
Medtr4g088240 Medicago truncatula HOM05D004833 ORTHO05D005671 1.8e-35 154.1 316 36.7
FAN17G0464 Fragaria x ananassa HOM05D004833 ORTHO05D005671 4.0e-35 152.9 129 64.3
FvH4_4g02980 Fragaria vesca HOM05D004833 ORTHO05D005671 5.2e-35 152.5 129 63.6
FAN12G1135 Fragaria x ananassa HOM05D004833 ORTHO05D005671 5.2e-35 152.5 129 63.6
FAN12G1996 Fragaria x ananassa HOM05D004833 ORTHO05D005671 5.2e-35 152.5 129 63.6
FAN28G1505 Fragaria x ananassa HOM05D004833 ORTHO05D005671 5.2e-35 152.5 129 64.3
RcHm_v2.0_Chr7g0224291 Rosa chinensis HOM05D004833 ORTHO05D005671 1.5e-34 151.0 342 36.3
Duzib151G1051 Durio zibethinus HOM05D004833 ORTHO05D005671 2.6e-34 150.2 360 34.7
RcHm_v2.0_Chr7g0211851 Rosa chinensis HOM05D004833 ORTHO05D005671 4.4e-34 149.4 357 35.9
Cpa.g.sc44.108 Carica papaya HOM05D004833 ORTHO05D005671 5.8e-34 149.1 400 32.8
Actinidia40079 Actinidia chinensis HOM05D004833 ORTHO05D005671 2.2e-33 147.1 443 32.1
FAN17G0043 Fragaria x ananassa HOM05D004833 ORTHO05D005671 2.2e-33 147.1 311 39.5
MD13G1205500 Malus domestica HOM05D004833 ORTHO05D005671 2.9e-33 146.7 362 39.2
Dinv29897 Davidia involucrata HOM05D004833 ORTHO05D005671 1.9e-32 144.1 455 31.4
A05p45200 Brassica napus HOM05D004833 ORTHO05D005671 2.4e-32 143.7 352 33.5
Phvul.002G328500 Phaseolus vulgaris HOM05D004833 ORTHO05D005671 2.4e-32 143.7 362 34.5
Ciclev10005174m.g Citrus clementina HOM05D004833 ORTHO05D005671 4.2e-32 142.9 385 34.5
COL.COLO4_15806 Corchorus olitorius HOM05D004833 ORTHO05D005671 2.1e-31 140.6 377 30.5
CSS0034891 Camellia sinensis var. sinensis HOM05D004833 ORTHO05D005671 2.7e-31 140.2 431 33.4
Rhsim04G0155000 Rhododendron simsii HOM05D004833 ORTHO05D005671 2.7e-31 140.2 410 32.7
AT4G14490 Arabidopsis thaliana HOM05D004833 ORTHO05D005671 3.5e-31 139.8 390 33.3
Atru.chr4.2164 Acer truncatum HOM05D004833 ORTHO05D005671 6.0e-31 139.0 420 32.1
Ciclev10004978m.g Citrus clementina HOM05D004833 ORTHO05D005671 5.1e-30 136.0 443 35.4
CANSAT25G0083 Cannabis sativa HOM05D004833 ORTHO05D005671 4.3e-29 132.9 349 34.4
Lj4g0009172 Lotus japonicus HOM05D004833 ORTHO05D005671 7.3e-29 132.1 163 49.1
arahy.Tifrunner.gnm1.ann1.CY5RP0 Arachis hypogaea HOM05D004833 ORTHO05D005671 1.3e-28 131.3 474 29.5
PGR004G1107 Punica granatum HOM05D004833 ORTHO05D005671 2.8e-28 130.2 448 29.2
BraA05t23142Z Brassica rapa HOM05D004833 ORTHO05D005671 4.8e-28 129.4 415 31.1
Eucgr.G02729 Eucalyptus grandis HOM05D004833 ORTHO05D005671 6.2e-28 129.0 405 30.4
DCAR_028835 Daucus carota HOM05D004833 ORTHO05D005671 1.4e-27 127.9 339 34.2
TPR.G14924 Trifolium pratense HOM05D004833 ORTHO05D005671 1.8e-27 127.5 395 33.4
AL7G41650 Arabidopsis lyrata HOM05D004833 ORTHO05D005671 2.4e-27 127.1 360 31.4
MSTRG.24695 Avicennia marina HOM05D004833 ORTHO05D005671 5.3e-27 125.9 449 31.6
BcaB04g21413 Brassica carinata HOM05D004833 ORTHO05D005671 5.3e-27 125.9 140 52.1
Psat7g116640 Pisum sativum HOM05D004833 ORTHO05D005671 5.3e-27 125.9 171 45.6
VMungo0251G0345 Vigna mungo HOM05D004833 ORTHO05D005671 5.3e-27 125.9 434 28.8
Lalb_Chr05g0218581 Lupinus albus HOM05D004833 ORTHO05D005671 9.0e-27 125.2 407 30.2
Medtr8g069140 Medicago truncatula HOM05D004833 ORTHO05D005671 9.0e-27 125.2 119 55.5
Oeu002595.1 Olea europaea HOM05D004833 ORTHO05D005671 9.0e-27 125.2 451 29.9
Lsat_1_v5_gn_4_144160 Lactuca sativa HOM05D004833 ORTHO05D005671 1.5e-26 124.4 142 52.8
SHI08746 Sapria himalayana HOM05D004833 ORTHO05D005671 1.5e-26 124.4 362 31.5
Medtr4g088235 Medicago truncatula HOM05D004833 ORTHO05D005671 2.0e-26 124.0 119 55.5
Hma1.2p1_0310F.1_g120780 Hydrangea macrophylla HOM05D004833 ORTHO05D005671 2.6e-26 123.6 126 56.3
BcaC09g47698 Brassica carinata HOM05D004833 ORTHO05D005671 3.4e-26 123.2 164 48.8
Aa31LG9G2800 Aethionema arabicum HOM05D004833 ORTHO05D005671 4.4e-26 122.9 163 47.2
AL3G11690 Arabidopsis lyrata HOM05D004833 ORTHO05D005671 4.4e-26 122.9 161 47.8
AT3G02400 Arabidopsis thaliana HOM05D004833 ORTHO05D005671 5.8e-26 122.5 163 47.2
arahy.Tifrunner.gnm1.ann1.DI6KST Arachis hypogaea HOM05D004833 ORTHO05D005671 5.8e-26 122.5 470 28.9
Thhalv10020728m.g Eutrema salsugineum HOM05D004833 ORTHO05D005671 7.6e-26 122.1 163 46.6
Lj4g0026393 Lotus japonicus HOM05D004833 ORTHO05D005671 9.9e-26 121.7 416 32.0
Carub.0003s0149 Capsella rubella HOM05D004833 ORTHO05D005671 1.3e-25 121.3 162 46.3
QL04p071463 Quercus lobata HOM05D004833 ORTHO05D005671 1.3e-25 121.3 111 62.2
Sp3g01440 Schrenkiella parvula HOM05D004833 ORTHO05D005671 1.3e-25 121.3 166 47.0
TAR633G1100 Trochodendron aralioides HOM05D004833 ORTHO05D005671 1.3e-25 121.3 457 33.0
BolC1t05907H Brassica oleracea HOM05D004833 ORTHO05D005671 2.9e-25 120.2 164 48.2
Glyma.07G201900 Glycine max HOM05D004833 ORTHO05D005671 3.8e-25 119.8 136 50.0
THA.LOC104808605 Tarenaya hassleriana HOM05D004833 ORTHO05D005671 4.9e-25 119.4 170 45.3
C09p75700 Brassica napus HOM05D004833 ORTHO05D005671 8.4e-25 118.6 255 40.0
BcaC05g30352 Brassica carinata HOM05D004833 ORTHO05D005671 1.1e-24 118.2 255 40.0
BcaC01g04448 Brassica carinata HOM05D004833 ORTHO05D005671 1.9e-24 117.5 169 44.4
BraSC141t45625Z Brassica rapa HOM05D004833 ORTHO05D005671 2.4e-24 117.1 165 46.7
EL10Ac7g16793 Beta vulgaris HOM05D004833 ORTHO05D005671 3.2e-24 116.7 140 49.3
BcaC01g04551 Brassica carinata HOM05D004833 ORTHO05D005671 3.2e-24 116.7 448 29.7
A03p32920 Brassica napus HOM05D004833 ORTHO05D005671 3.2e-24 116.7 117 53.0
Glyma.13G174400 Glycine max HOM05D004833 ORTHO05D005671 3.2e-24 116.7 155 45.8
Lj6P658T33 Lonicera japonica HOM05D004833 ORTHO05D005671 3.2e-24 116.7 138 50.0
Ca_18598_v3 Cicer arietinum L. HOM05D004833 ORTHO05D005671 4.2e-24 116.3 422 33.6
CARHR076370 Cardamine hirsuta HOM05D004833 ORTHO05D005671 7.1e-24 115.5 160 46.9
SalBow3G2302 Salvia bowleyana HOM05D004833 ORTHO05D005671 7.1e-24 115.5 407 30.0
Peaxi162Scf00209g00118 Petunia axillaris HOM05D004833 ORTHO05D005671 9.3e-24 115.2 483 29.8
Aa31LG8G9600 Aethionema arabicum HOM05D004833 ORTHO05D005671 1.2e-23 114.8 158 45.6
C03p40050 Brassica napus HOM05D005209 ORTHO05D006188 1.2e-23 114.8 171 43.9
BolC3t16270H Brassica oleracea HOM05D005209 ORTHO05D006188 1.2e-23 114.8 171 43.9
BraA03t12461Z Brassica rapa HOM05D005209 ORTHO05D006188 1.2e-23 114.8 117 53.0
Migut.N00255 Erythranthe guttata HOM05D004833 ORTHO05D005671 2.1e-23 114.0 431 32.5
DCAR_024234 Daucus carota HOM05D004833 ORTHO05D005671 2.7e-23 113.6 163 48.5
Ah.15g090410 Amaranthus hybridus HOM05D004833 ORTHO05D005671 6.0e-23 112.5 146 49.3
TAR362G1060 Trochodendron aralioides HOM05D004833 ORTHO05D005671 7.9e-23 112.1 463 26.8
ECA234G1378 Erigeron canadensis HOM05D000038 ORTHO05D000423 3.0e-22 110.2 133 48.9
HanXRQChr09g0257341 Helianthus annuus HOM05D004833 ORTHO05D005671 3.0e-22 110.2 373 31.1
BNapus_Darmor_BZH_scaffold_208p00080 Brassica napus HOM05D004833 ORTHO05D005671 3.9e-22 109.8 168 44.0
Sc25g0004110 Simmondsia chinensis HOM05D004833 ORTHO05D005671 5.1e-22 109.4 148 50.0
Aqoxy4G02560 Aquilegia oxysepala HOM05D004833 ORTHO05D005671 8.7e-22 108.6 408 27.2
Carub.0007s2773 Capsella rubella HOM05D004833 ORTHO05D005671 1.5e-21 107.8 399 29.8
ECA232G1138 Erigeron canadensis HOM05D004833 ORTHO05D005671 4.3e-21 106.3 155 45.8
ECA232G0897 Erigeron canadensis HOM05D004833 ORTHO05D005671 9.6e-21 105.1 135 45.9
HanXRQChr05g0145861 Helianthus annuus HOM05D004833 ORTHO05D005671 1.6e-20 104.4 385 29.9
HanXRQChr11g0331421 Helianthus annuus HOM05D004833 ORTHO05D005671 1.6e-20 104.4 385 29.9
SGA_v2.0_scaffold308G48094 Striga asiatica HOM05D004833 ORTHO05D005671 2.1e-20 104.0 402 29.1
Nn4g25548 Nelumbo nucifera HOM05D004833 ORTHO05D005671 2.8e-20 103.6 281 30.6
Nitab4.5_0002289g0040 Nicotiana tabacum HOM05D004833 ORTHO05D005671 8.1e-20 102.1 138 44.9
Sopen08g026960 Solanum pennellii HOM05D004833 ORTHO05D005671 1.1e-19 101.7 174 42.5
MBI19_g03257_MAGBIO Magnolia biondii HOM05D004833 ORTHO05D005671 1.8e-19 100.9 416 27.9
CAN.G1178.27 Capsicum annuum HOM05D004833 ORTHO05D005671 2.4e-19 100.5 137 45.3
Solyc08g078470.4 Solanum lycopersicum HOM05D004833 ORTHO05D005671 4.0e-19 99.8 174 42.0
Nitab4.5_0001381g0160 Nicotiana tabacum HOM05D004833 ORTHO05D005671 6.9e-19 99.0 258 32.9
PGSC0003DMG400004768 Solanum tuberosum HOM05D004833 ORTHO05D005671 9.0e-19 98.6 174 42.0
unitig_52.g17411 Utricularia gibba HOM05D004833 ORTHO05D005671 2.6e-18 97.1 132 46.2
unitig_899.g14712 Utricularia gibba HOM05D004833 ORTHO05D005671 1.7e-17 94.4 427 27.6
HPP92_002667 Vanilla planifolia HOM05D004833 ORTHO05D005671 1.1e-16 91.7 314 30.6
HPP92_014115 Vanilla planifolia HOM05D004833 ORTHO05D005671 1.1e-16 91.7 164 39.6
ATR0693G179 Amborella trichopoda HOM05D004833 ORTHO05D005671 3.2e-16 90.1 331 31.1
PSO761G0588 Papaver somniferum HOM05D004833 ORTHO05D005671 1.2e-15 88.2 443 25.3
Os03g0728500 Oryza sativa ssp. japonica HOM05D004833 ORTHO05D005671 2.7e-15 87.0 130 41.5
CDE09G0593 Ceratophyllum demersum HOM05D004833 ORTHO05D005671 3.5e-15 86.7 171 35.7
SEGI_17679 Sequoiadendron giganteum HOM05D004833 ORTHO05D005671 7.9e-15 85.5 115 40.9
PSO210G7662 Papaver somniferum HOM05D004833 ORTHO05D005671 1.3e-14 84.7 152 38.2
HPP92_002726 Vanilla planifolia HOM05D004833 ORTHO05D005671 2.5e-13 80.5 156 39.7
CiPaw.01G189200 Carya illinoinensis HOM05D004833 ORTHO05D005671 1.3e-12 78.2 92 51.1
Zm00001eb056120 Zea mays HOM05D004833 ORTHO05D005671 1.3e-12 78.2 159 35.2
Zm00001eb215540 Zea mays HOM05D004833 ORTHO05D005671 1.4e-11 74.7 166 34.3
Phvul.002G234300 Phaseolus vulgaris HOM05D004833 ORTHO05D005671 1.5e-10 71.2 48 64.6
Cfa008363 Carpinus fangiana HOM05D004833 ORTHO05D005671 2.2e-09 67.4 194 33.5
BolC5t35084H Brassica oleracea HOM05D004833 ORTHO05D005671 6.5e-09 65.9 117 39.3
CDE02G0054 Ceratophyllum demersum HOM05D004833 ORTHO05D005671 5.5e-08 62.8 175 32.6
Actinidia04469 Actinidia chinensis HOM05D004833 ORTHO05D005671 7.1e-08 62.4 115 36.5
Pp3c19_11080 Physcomitrium patens HOM05D004833 ORTHO05D005671 1.2e-07 61.6 118 35.6
SGA_v2.0_scaffold93G28322 Striga asiatica HOM05D004184 ORTHO05D004863 2.1e-07 60.8 43 60.5
CBR_g21751 Chara braunii HOM05D004833 ORTHO05D005671 1.0e-06 58.5 107 36.4
unitig_52.g17410 Utricularia gibba HOM05D001680 ORTHO05D001596 1.0e-06 58.5 58 46.6
Lj6P658T32 Lonicera japonica HOM05D004833 ORTHO05D005671 1.3e-06 58.2 120 35.0
PRCOL_00002026 Prasinoderma coloniale HOM05D004833 ORTHO05D005671 1.8e-06 57.8 119 35.3
Cre09.g402350 Chlamydomonas reinhardtii HOM05D004833 ORTHO05D005671 3.0e-06 57.0 115 32.2
BcaC08g43040 Brassica carinata HOM05D010442 ORTHO05D010690 5.1e-06 56.2 86 38.4


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