Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p070625 Quercus lobata HOM05D000181 ORTHO05D028538 1.9e-56 222.2 110 100.0
QL04p087205 Quercus lobata HOM05D000181 ORTHO05D007068 3.6e-39 164.9 89 92.1
Haze_07800 Corylus avellana HOM05D000181 ORTHO05D007068 2.9e-28 128.6 89 75.3
RcHm_v2.0_Chr5g0024281 Rosa chinensis HOM05D000181 ORTHO05D007068 6.2e-23 110.9 89 62.9
Prupe.4G132700 Prunus persica HOM05D000181 ORTHO05D007068 1.5e-21 106.3 89 60.7
FvH4_3g14760 Fragaria vesca HOM05D000181 ORTHO05D007068 9.9e-21 103.6 89 61.8
FAN21G2082 Fragaria x ananassa HOM05D000181 ORTHO05D007068 9.9e-21 103.6 89 62.9
FAN16G1891 Fragaria x ananassa HOM05D000181 ORTHO05D007068 2.2e-20 102.4 89 61.8
FAN25G2563 Fragaria x ananassa HOM05D000181 ORTHO05D007068 2.2e-20 102.4 89 61.8
MD05G1229800 Malus domestica HOM05D000181 ORTHO05D007068 3.8e-20 101.7 89 56.2
FAN11G1148 Fragaria x ananassa HOM05D000181 ORTHO05D007068 1.4e-19 99.8 89 60.7
MD10G1209600 Malus domestica HOM05D000181 ORTHO05D028538 3.5e-18 95.1 89 57.3
CANSAT80G1988 Cannabis sativa HOM05D000181 ORTHO05D007068 1.1e-16 90.1 89 53.9
Potri.010G171300 Populus trichocarpa HOM05D000181 ORTHO05D007068 2.5e-16 89.0 90 56.7
TWI38G0335 Tripterygium wilfordii HOM05D000181 ORTHO05D007068 4.3e-16 88.2 89 52.8
Manes.06G176300 Manihot esculenta HOM05D000181 ORTHO05D007068 8.1e-15 84.0 89 51.7
Ciclev10004242m.g Citrus clementina HOM05D000181 ORTHO05D007068 5.2e-14 81.3 89 52.8
Sabra10G0130900 Salix brachista HOM05D000181 ORTHO05D007068 6.9e-14 80.9 90 53.3
Thecc.07G182000 Theobroma cacao HOM05D000181 ORTHO05D007068 3.4e-13 78.6 91 48.4
TAR627G0133 Trochodendron aralioides HOM05D000181 ORTHO05D007068 5.8e-13 77.8 93 50.5
Duzib213G0016 Durio zibethinus HOM05D000181 ORTHO05D007068 9.9e-13 77.0 91 51.6
Sed0005173 Sechium edule HOM05D000181 ORTHO05D007068 4.9e-12 74.7 89 44.9
Dinv42476 Davidia involucrata HOM05D000181 ORTHO05D007068 8.4e-12 73.9 96 47.9
COL.COLO4_19749 Corchorus olitorius HOM05D000181 ORTHO05D007068 1.9e-11 72.8 92 48.9
THA.LOC104812371 Tarenaya hassleriana HOM05D000181 ORTHO05D007068 7.1e-11 70.9 93 48.4
A07p27070 Brassica napus HOM05D000181 ORTHO05D007068 9.3e-11 70.5 94 42.6
C06p29810 Brassica napus HOM05D000181 ORTHO05D007068 1.6e-10 69.7 94 41.5
BolC6t38142H Brassica oleracea HOM05D000181 ORTHO05D007068 1.6e-10 69.7 94 41.5
Thhalv10018071m.g Eutrema salsugineum HOM05D000181 ORTHO05D007068 7.8e-10 67.4 94 41.5
Cpa.g.sc32.40 Carica papaya HOM05D000181 ORTHO05D028538 1.3e-09 66.6 89 42.7
BcaB02g07224 Brassica carinata HOM05D000181 ORTHO05D007068 2.3e-09 65.9 94 40.4
GSVIVG01036763001 Vitis vinifera HOM05D000181 ORTHO05D007068 8.7e-09 63.9 98 43.9
Actinidia37132 Actinidia chinensis HOM05D000181 ORTHO05D007068 1.9e-08 62.8 98 43.9
AT1G79560 Arabidopsis thaliana HOM05D000181 ORTHO05D007068 2.5e-08 62.4 94 38.3
CSS0042976 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D007068 2.5e-08 62.4 60 56.7
Carub.0002s2642 Capsella rubella HOM05D000181 ORTHO05D007068 4.3e-08 61.6 94 39.4
Glyma.08G237500 Glycine max HOM05D000181 ORTHO05D007068 7.3e-08 60.8 89 43.8
BraA07t30351Z Brassica rapa HOM05D000181 ORTHO05D007068 9.6e-08 60.5 94 41.5
AL2G40200 Arabidopsis lyrata HOM05D000181 ORTHO05D007068 1.6e-07 59.7 94 37.2
PSO675G5464 Papaver somniferum HOM05D000181 ORTHO05D007068 2.1e-07 59.3 94 38.3
MBI18_g34711_MAGBIO Magnolia biondii HOM05D000181 ORTHO05D028538 3.6e-07 58.5 90 42.2
DCAR_013723 Daucus carota HOM05D000181 ORTHO05D007068 4.8e-07 58.2 86 38.4
PSO675G4612 Papaver somniferum HOM05D000181 ORTHO05D007068 1.8e-06 56.2 95 37.9
Lsat_1_v5_gn_7_69480 Lactuca sativa HOM05D000181 ORTHO05D007068 4.0e-06 55.1 96 39.6
Lj3g0011719 Lotus japonicus HOM05D000181 ORTHO05D007068 4.0e-06 55.1 91 38.5
Aqoxy1G01434 Aquilegia oxysepala HOM05D000181 ORTHO05D007068 5.3e-06 54.7 95 34.7


User provided reference genes

Program Settings