Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p068533 Quercus lobata HOM05D006015 ORTHO05D007816 4.3e-261 904.0 430 100.0
CiPaw.04G196900 Carya illinoinensis HOM05D006015 ORTHO05D007816 7.8e-223 776.9 430 84.2
Cfa014228 Carpinus fangiana HOM05D006015 ORTHO05D007816 7.1e-216 753.8 429 81.8
MD09G1126500 Malus domestica HOM05D006015 ORTHO05D007816 6.2e-204 714.1 427 76.8
MD17G1116800 Malus domestica HOM05D006015 ORTHO05D007816 1.2e-202 709.9 427 76.8
Sabra14G0127200 Salix brachista HOM05D006015 ORTHO05D007816 2.9e-201 705.3 424 78.5
Potri.014G167200 Populus trichocarpa HOM05D006015 ORTHO05D007816 8.7e-198 693.7 433 76.2
Thecc.01G195800 Theobroma cacao HOM05D006015 ORTHO05D007816 1.1e-197 693.3 430 75.1
Gohir.A11G149000 Gossypium hirsutum HOM05D006015 ORTHO05D007816 1.9e-197 692.6 426 76.1
Ciclev10015287m.g Citrus clementina HOM05D006015 ORTHO05D007816 2.5e-197 692.2 431 75.6
Duzib211G0350 Durio zibethinus HOM05D006015 ORTHO05D007816 4.3e-197 691.4 428 75.0
COL.COLO4_33334 Corchorus olitorius HOM05D006015 ORTHO05D007816 7.4e-197 690.6 429 75.5
TWI18G0302 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 7.4e-197 690.6 427 76.1
Gorai.007G166200 Gossypium raimondii HOM05D006015 ORTHO05D007816 1.3e-196 689.9 430 75.6
Duzib138G1954 Durio zibethinus HOM05D006015 ORTHO05D007816 3.7e-196 688.3 432 75.9
Gohir.D11G156100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 3.7e-196 688.3 427 75.9
Rhsim04G0027900 Rhododendron simsii HOM05D006015 ORTHO05D007816 3.7e-196 688.3 425 76.7
RcHm_v2.0_Chr2g0156011 Rosa chinensis HOM05D006015 ORTHO05D007816 8.2e-196 687.2 425 73.9
FAN09G3933 Fragaria x ananassa HOM05D006015 ORTHO05D007816 1.4e-195 686.4 424 73.8
FAN02G2834 Fragaria x ananassa HOM05D006015 ORTHO05D007816 1.8e-195 686.0 424 73.8
Ca_25000_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 2.4e-195 685.6 433 74.1
Ca_30801_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 2.4e-195 685.6 433 74.1
Gorai.001G221700 Gossypium raimondii HOM05D006015 ORTHO05D007816 5.3e-195 684.5 423 75.7
CSS0001355 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 6.9e-195 684.1 425 75.1
CSS0036117 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 6.9e-195 684.1 425 75.1
Dinv26607 Davidia involucrata HOM05D006015 ORTHO05D007816 6.9e-195 684.1 430 74.7
Lj6g0021297 Lotus japonicus HOM05D006015 ORTHO05D007816 1.2e-194 683.3 427 74.2
TPR.G23976 Trifolium pratense HOM05D006015 ORTHO05D007816 1.5e-194 682.9 434 73.3
Gohir.D07G198100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 4.5e-194 681.4 423 75.4
CANSAT64G2535 Cannabis sativa HOM05D006015 ORTHO05D007816 7.7e-194 680.6 427 74.7
FvH4_6g40640 Fragaria vesca HOM05D006015 ORTHO05D007816 7.7e-194 680.6 424 73.1
FAN14G1195 Fragaria x ananassa HOM05D006015 ORTHO05D007816 1.0e-193 680.2 424 73.1
Medtr1g046210 Medicago truncatula HOM05D006015 ORTHO05D007816 5.0e-193 677.9 425 73.2
FAN05G5154 Fragaria x ananassa HOM05D006015 ORTHO05D007816 6.5e-193 677.6 424 72.9
Eucgr.H00879 Eucalyptus grandis HOM05D006015 ORTHO05D007816 1.4e-192 676.4 428 73.1
Psat6g109000 Pisum sativum HOM05D006015 ORTHO05D007816 4.2e-192 674.9 424 75.2
ECA236G0403 Erigeron canadensis HOM05D006015 ORTHO05D007816 1.6e-191 672.9 429 72.7
VMungo0720G1520 Vigna mungo HOM05D006015 ORTHO05D007816 2.1e-191 672.5 433 73.7
Glyma.10G128800 Glycine max HOM05D006015 ORTHO05D007816 6.1e-191 671.0 431 73.1
HanXRQChr11g0329021 Helianthus annuus HOM05D006015 ORTHO05D007816 1.0e-190 670.2 422 73.0
PGR083G2314 Punica granatum HOM05D006015 ORTHO05D007816 1.0e-190 670.2 429 73.2
Phvul.007G239000 Phaseolus vulgaris HOM05D006015 ORTHO05D007816 1.4e-190 669.8 432 72.7
CSS0038739 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 2.3e-190 669.1 425 74.6
Atru.chr6.3393 Acer truncatum HOM05D006015 ORTHO05D007816 5.1e-190 667.9 424 72.6
Nn3g19725 Nelumbo nucifera HOM05D006015 ORTHO05D007816 5.1e-190 667.9 424 72.6
Manes.12G065800 Manihot esculenta HOM05D006015 ORTHO05D007816 1.1e-189 666.8 433 73.7
TWI75G1720 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 3.7e-188 661.8 427 74.2
Oeu064356.1 Olea europaea HOM05D006015 ORTHO05D007816 1.1e-187 660.2 420 73.1
Cpa.g.sc136.28 Carica papaya HOM05D006015 ORTHO05D007816 1.4e-187 659.8 419 72.6
Lalb_Chr03g0036841 Lupinus albus HOM05D006015 ORTHO05D007816 6.9e-187 657.5 432 71.8
Aqoxy1G04250 Aquilegia oxysepala HOM05D006015 ORTHO05D007816 1.5e-186 656.4 424 72.4
CsaV3_7G002510 Cucumis sativus L. HOM05D006015 ORTHO05D007816 4.5e-186 654.8 425 71.5
DCAR_019683 Daucus carota HOM05D006015 ORTHO05D007816 5.9e-186 654.4 426 70.7
Rhsim06G0176400 Rhododendron simsii HOM05D006015 ORTHO05D007816 5.9e-186 654.4 421 72.2
Cc08_g02360 Coffea canephora HOM05D006015 ORTHO05D007816 1.0e-185 653.7 424 70.8
MELO3C024194.2 Cucumis melo HOM05D006015 ORTHO05D007816 1.0e-185 653.7 427 71.2
Lalb_Chr01g0011281 Lupinus albus HOM05D006015 ORTHO05D007816 2.9e-185 652.1 433 71.1
Lsat_1_v5_gn_7_96920 Lactuca sativa HOM05D006015 ORTHO05D007816 5.0e-185 651.4 426 69.5
TAR629G2010 Trochodendron aralioides HOM05D006015 ORTHO05D007816 3.6e-183 645.2 420 71.7
MSTRG.10825 Avicennia marina HOM05D006015 ORTHO05D007816 1.0e-182 643.7 429 70.6
ClCG02G002870 Citrullus lanatus HOM05D006015 ORTHO05D007816 1.4e-182 643.3 426 70.7
PGSC0003DMG400017397 Solanum tuberosum HOM05D006015 ORTHO05D007816 8.8e-182 640.6 424 69.6
Peaxi162Scf00802g00022 Petunia axillaris HOM05D006015 ORTHO05D007816 3.3e-181 638.6 428 68.0
Sed0012767 Sechium edule HOM05D006015 ORTHO05D007816 3.3e-181 638.6 431 70.1
Nitab4.5_0001867g0080 Nicotiana tabacum HOM05D006015 ORTHO05D007816 1.3e-180 636.7 428 68.7
Migut.K00073 Erythranthe guttata HOM05D006015 ORTHO05D007816 2.8e-180 635.6 426 70.0
Solyc07g045470.3 Solanum lycopersicum HOM05D006015 ORTHO05D007816 2.8e-180 635.6 424 68.9
Sed0014474 Sechium edule HOM05D006015 ORTHO05D007816 6.3e-180 634.4 426 69.7
PSO302G0043 Papaver somniferum HOM05D006015 ORTHO05D007816 8.2e-180 634.0 430 68.1
Gohir.A07G191800 Gossypium hirsutum HOM05D006015 ORTHO05D007816 1.1e-179 633.6 423 72.6
Sopen07g024010 Solanum pennellii HOM05D006015 ORTHO05D007816 4.1e-179 631.7 424 68.9
CAN.G177.8 Capsicum annuum HOM05D006015 ORTHO05D007816 7.0e-179 630.9 422 68.7
Nitab4.5_0001701g0190 Nicotiana tabacum HOM05D006015 ORTHO05D007816 7.0e-179 630.9 429 69.2
MBI16_g07770_MAGBIO Magnolia biondii HOM05D006015 ORTHO05D007816 1.2e-178 630.2 434 67.5
PSO210G7679 Papaver somniferum HOM05D006015 ORTHO05D007816 1.7e-177 626.3 429 67.6
MSTRG.6445 Avicennia marina HOM05D006015 ORTHO05D007816 2.2e-177 625.9 429 69.7
Sc21g0000520 Simmondsia chinensis HOM05D006015 ORTHO05D007816 3.8e-177 625.2 424 68.2
THA.LOC104808847 Tarenaya hassleriana HOM05D006015 ORTHO05D007816 6.5e-177 624.4 426 68.5
Atru.BG.41.p Acer truncatum HOM05D006015 ORTHO05D007816 1.4e-176 623.2 354 77.7
AUR62029116 Chenopodium quinoa HOM05D006015 ORTHO05D007816 1.4e-176 623.2 417 68.3
Hma1.2p1_0545F.1_g175930 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 5.5e-176 621.3 358 77.7
Sp3g23770 Schrenkiella parvula HOM05D006015 ORTHO05D007816 6.7e-174 614.4 426 66.7
Ah.01g002640 Amaranthus hybridus HOM05D006015 ORTHO05D007816 5.7e-173 611.3 358 75.7
vmacro12084 Vaccinium macrocarpon HOM05D006015 ORTHO05D007816 7.4e-173 610.9 345 79.1
Thhalv10002538m.g Eutrema salsugineum HOM05D006015 ORTHO05D007816 2.2e-172 609.4 420 67.9
Lj1P796T26 Lonicera japonica HOM05D006015 ORTHO05D007816 2.8e-172 609.0 336 80.7
BcaB08g34500 Brassica carinata HOM05D006015 ORTHO05D007816 4.1e-171 605.1 416 67.3
AL3G42830 Arabidopsis lyrata HOM05D006015 ORTHO05D007816 7.0e-171 604.4 427 66.3
Carub.0003s2938 Capsella rubella HOM05D006015 ORTHO05D007816 7.0e-171 604.4 428 66.4
ATR0827G116 Amborella trichopoda HOM05D006015 ORTHO05D007816 3.8e-169 598.6 434 64.7
AT2G05320 Arabidopsis thaliana HOM05D006015 ORTHO05D007816 3.8e-169 598.6 418 66.7
Lj8P135T89 Lonicera japonica HOM05D006015 ORTHO05D007816 1.5e-168 596.7 343 77.6
Actinidia07868 Actinidia chinensis HOM05D006015 ORTHO05D007816 2.5e-168 595.9 425 68.0
BcaC01g03165 Brassica carinata HOM05D006015 ORTHO05D007816 2.1e-167 592.8 416 67.3
BolC3t17819H Brassica oleracea HOM05D006015 ORTHO05D007816 2.1e-167 592.8 416 67.3
CARHR103100 Cardamine hirsuta HOM05D006015 ORTHO05D007816 2.3e-166 589.3 351 74.6
C03p55440 Brassica napus HOM05D006015 ORTHO05D007816 6.7e-166 587.8 416 66.6
A03p44610 Brassica napus HOM05D006015 ORTHO05D007816 4.4e-165 585.1 416 66.1
BraA03t13594Z Brassica rapa HOM05D006015 ORTHO05D007816 4.4e-165 585.1 416 66.1
SGA_v2.0_scaffold94G28455 Striga asiatica HOM05D003478 ORTHO05D004196 1.7e-164 583.2 414 66.9
Nn1g02851 Nelumbo nucifera HOM05D006015 ORTHO05D007816 8.3e-164 580.9 414 66.2
unitig_37.g12711 Utricularia gibba HOM05D006015 ORTHO05D007816 8.3e-164 580.9 423 64.1
Aa31LG8G11520 Aethionema arabicum HOM05D006015 ORTHO05D007816 4.1e-163 578.6 417 64.7
CDE05G3376 Ceratophyllum demersum HOM05D006015 ORTHO05D007816 9.1e-163 577.4 418 65.1
SHI10157 Sapria himalayana HOM05D006015 ORTHO05D007816 1.0e-161 573.9 368 69.6
HPP92_001839 Vanilla planifolia HOM05D006015 ORTHO05D007816 1.7e-161 573.2 360 69.7
AUR62015007 Chenopodium quinoa HOM05D006015 ORTHO05D007816 6.5e-161 571.2 395 66.8
SEGI_05803 Sequoiadendron giganteum HOM05D006015 ORTHO05D007816 1.9e-160 569.7 376 67.0
Os02g0798100 Oryza sativa ssp. japonica HOM05D006015 ORTHO05D007816 2.5e-160 569.3 361 69.5
Migut.J01779 Erythranthe guttata HOM05D006015 ORTHO05D007816 8.8e-158 560.8 421 64.8
Zm00001eb192260 Zea mays HOM05D006015 ORTHO05D007816 2.6e-157 559.3 362 67.4
Actinidia18833 Actinidia chinensis HOM05D006015 ORTHO05D007816 2.3e-153 546.2 425 62.8
Prupe.3G198000 Prunus persica HOM05D006015 ORTHO05D007816 9.8e-149 530.8 283 81.3
Glyma.20G080200 Glycine max HOM05D006015 ORTHO05D007816 7.0e-147 524.6 290 78.6
Pp3c12_25130 Physcomitrium patens HOM05D006015 ORTHO05D007816 1.1e-139 500.7 377 60.2
SMO358G0350 Selaginella moellendorffii HOM05D006015 ORTHO05D007816 1.2e-138 497.3 354 62.7
Pp3c8_6700 Physcomitrium patens HOM05D006015 ORTHO05D007816 1.4e-134 483.8 415 54.9
Mapoly0086s0006 Marchantia polymorpha HOM05D006015 ORTHO05D007816 1.2e-130 470.7 360 61.9
SalBow1G4868 Salvia bowleyana HOM05D006015 ORTHO05D007816 7.6e-117 424.9 337 61.1
SalBow6G1876 Salvia bowleyana HOM05D006015 ORTHO05D007816 5.8e-101 372.1 215 74.9
MSTRG.26113 Avicennia marina HOM05D006015 ORTHO05D007816 3.8e-100 369.4 209 77.0
Hma1.2p1_0545F.1_g175940 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 4.9e-100 369.0 210 77.1
AagrBONN_evm.TU.Sc2ySwM_368.1590 Anthoceros agrestis HOM05D006015 ORTHO05D007816 1.1e-99 367.9 419 46.5
CBR_g52107 Chara braunii HOM05D006015 ORTHO05D000002 2.8e-95 353.2 275 58.5
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 4.2e-67 259.6 229 56.8
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 4.1e-62 243.0 371 40.7
Nn5g28971 Nelumbo nucifera HOM05D006015 ORTHO05D007816 1.9e-27 127.9 95 54.7
Actinidia35205 Actinidia chinensis HOM05D001060 ORTHO05D000905 2.1e-26 124.4 85 67.1
EL10Ac8g18725 Beta vulgaris HOM05D006015 ORTHO05D007816 8.0e-26 122.5 101 59.4
Aa31LG8G11540 Aethionema arabicum HOM05D006015 ORTHO05D007816 1.2e-18 98.6 116 44.8


User provided reference genes

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