Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p067008 Quercus lobata HOM05D005155 ORTHO05D006266 6.8e-263 910.2 491 100.0
Haze_24928 Corylus avellana HOM05D005155 ORTHO05D006266 7.1e-87 325.5 496 47.8
Prupe.3G194600 Prunus persica HOM05D005155 ORTHO05D006266 2.5e-79 300.4 496 42.7
Cfa014201 Carpinus fangiana HOM05D005155 ORTHO05D006266 1.3e-75 288.1 502 48.4
CiPaw.04G197900 Carya illinoinensis HOM05D005155 ORTHO05D006266 2.0e-73 280.8 493 42.0
Manes.13G059900 Manihot esculenta HOM05D005155 ORTHO05D006266 2.1e-70 270.8 489 40.7
Ciclev10015959m.g Citrus clementina HOM05D005155 ORTHO05D006266 7.4e-68 262.3 499 39.5
CSS0035525 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 1.7e-67 261.2 495 39.2
Dinv21322 Davidia involucrata HOM05D005155 ORTHO05D006266 2.8e-67 260.4 494 39.9
Rhsim04G0007200 Rhododendron simsii HOM05D005155 ORTHO05D006266 1.1e-66 258.5 506 40.1
ClCG02G003040 Citrullus lanatus HOM05D005155 ORTHO05D006266 3.1e-66 256.9 487 41.7
Cpa.g.sc136.55 Carica papaya HOM05D005155 ORTHO05D006266 2.6e-65 253.8 495 39.8
Gohir.D11G154600 Gossypium hirsutum HOM05D005155 ORTHO05D006266 3.4e-65 253.4 481 41.0
Gorai.007G164700 Gossypium raimondii HOM05D005155 ORTHO05D006266 3.4e-65 253.4 481 41.2
MD09G1131700 Malus domestica HOM05D005155 ORTHO05D006266 2.9e-64 250.4 508 42.1
Actinidia20603 Actinidia chinensis HOM05D005155 ORTHO05D006266 3.8e-64 250.0 494 38.7
MELO3C024180.2 Cucumis melo HOM05D005155 ORTHO05D006266 1.1e-63 248.4 487 40.0
FAN02G4414 Fragaria x ananassa HOM05D005155 ORTHO05D006266 1.4e-63 248.1 496 45.0
CANSAT64G2107 Cannabis sativa HOM05D005155 ORTHO05D006266 1.9e-63 247.7 512 42.2
CsaV3_7G002370 Cucumis sativus L. HOM05D005155 ORTHO05D006266 4.2e-63 246.5 487 40.0
Sed0007088 Sechium edule HOM05D005155 ORTHO05D006266 7.2e-63 245.7 498 38.2
Glyma.03G238300 Glycine max HOM05D005155 ORTHO05D006266 2.1e-62 244.2 514 37.0
Atru.chr6.3431 Acer truncatum HOM05D005155 ORTHO05D006266 7.9e-62 242.3 492 39.8
Hma1.2p1_0629F.1_g192150 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 7.9e-62 242.3 494 38.9
FAN09G4460 Fragaria x ananassa HOM05D005155 ORTHO05D006266 1.0e-61 241.9 496 44.2
Duzib211G0098 Durio zibethinus HOM05D005155 ORTHO05D006266 3.9e-61 240.0 482 41.7
Haze_12586 Corylus avellana HOM05D005155 ORTHO05D006266 5.1e-61 239.6 395 43.8
Potri.014G170500 Populus trichocarpa HOM05D005155 ORTHO05D006266 6.7e-61 239.2 496 37.5
Actinidia20617 Actinidia chinensis HOM05D005155 ORTHO05D006266 1.1e-60 238.4 474 38.0
FAN14G3535 Fragaria x ananassa HOM05D005155 ORTHO05D006266 1.5e-60 238.0 496 45.0
Dinv05324 Davidia involucrata HOM05D005155 ORTHO05D006266 3.3e-60 236.9 475 38.7
Duzib138G0133 Durio zibethinus HOM05D005155 ORTHO05D006266 1.3e-59 235.0 480 40.2
VMungo0540G1824 Vigna mungo HOM05D005155 ORTHO05D006266 1.3e-59 235.0 515 40.8
Glyma.19G235800 Glycine max HOM05D005155 ORTHO05D006266 1.7e-59 234.6 512 35.7
Thecc.01G199500 Theobroma cacao HOM05D005155 ORTHO05D006266 2.2e-59 234.2 494 41.3
TWI75G0909 Tripterygium wilfordii HOM05D005155 ORTHO05D006266 6.3e-59 232.6 495 37.2
Eucgr.K01388 Eucalyptus grandis HOM05D005155 ORTHO05D006266 1.1e-58 231.9 492 39.8
FvH4_6g40390 Fragaria vesca HOM05D005155 ORTHO05D006266 1.1e-58 231.9 496 43.3
FAN05G3842 Fragaria x ananassa HOM05D005155 ORTHO05D006266 1.1e-58 231.9 496 43.1
CSS0023894 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 1.4e-58 231.5 502 37.5
Phvul.006G092400 Phaseolus vulgaris HOM05D005155 ORTHO05D006266 1.4e-58 231.5 519 36.0
Gohir.D07G170200 Gossypium hirsutum HOM05D005155 ORTHO05D006266 2.4e-58 230.7 491 38.3
Gorai.001G190100 Gossypium raimondii HOM05D005155 ORTHO05D006266 4.1e-58 229.9 484 38.0
RcHm_v2.0_Chr2g0155591 Rosa chinensis HOM05D005155 ORTHO05D006266 7.0e-58 229.2 496 41.7
Actinidia24711 Actinidia chinensis HOM05D005155 ORTHO05D006266 1.6e-57 228.0 444 38.5
Oeu022053.1 Olea europaea HOM05D005155 ORTHO05D006266 3.5e-57 226.9 499 35.7
Aqoxy3G04181 Aquilegia oxysepala HOM05D005155 ORTHO05D006266 2.2e-56 224.2 514 40.7
Nitab4.5_0004941g0060 Nicotiana tabacum HOM05D005155 ORTHO05D006266 8.5e-56 222.2 509 38.7
GSVIVG01030126001 Vitis vinifera HOM05D005155 ORTHO05D006266 1.5e-55 221.5 450 36.7
TPR.G3861 Trifolium pratense HOM05D005155 ORTHO05D006266 1.9e-55 221.1 523 36.5
PGR044G0745 Punica granatum HOM05D005155 ORTHO05D006266 3.2e-55 220.3 491 34.6
Gohir.A07G163100 Gossypium hirsutum HOM05D005155 ORTHO05D006266 5.5e-55 219.5 489 37.2
Lalb_Chr21g0315451 Lupinus albus HOM05D005155 ORTHO05D006266 2.1e-54 217.6 510 35.3
TAR629G2368 Trochodendron aralioides HOM05D005155 ORTHO05D006266 3.6e-54 216.9 493 35.3
Nitab4.5_0003086g0050 Nicotiana tabacum HOM05D005155 ORTHO05D006266 4.0e-53 213.4 506 35.8
SGA_v2.0_scaffold181G39700 Striga asiatica HOM05D005155 ORTHO05D006266 1.5e-52 211.5 524 35.9
Thhalv10004636m.g Eutrema salsugineum HOM05D005155 ORTHO05D006266 1.7e-51 208.0 489 35.4
MD17G1119200 Malus domestica HOM05D005155 ORTHO05D006266 2.8e-51 207.2 262 55.0
Psat5g216800 Pisum sativum HOM05D005155 ORTHO05D006266 3.7e-51 206.8 277 49.5
Psat7g043480 Pisum sativum HOM05D005155 ORTHO05D006266 4.8e-51 206.5 497 34.6
Sp2g18610 Schrenkiella parvula HOM05D005155 ORTHO05D006266 6.3e-51 206.1 487 34.9
Lj4g0024217 Lotus japonicus HOM05D005155 ORTHO05D006266 1.8e-50 204.5 514 33.7
Carub.0008s0781 Capsella rubella HOM05D005155 ORTHO05D006266 5.3e-50 203.0 489 34.6
THA.LOC104802634 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 5.3e-50 203.0 478 35.8
DCAR_021083 Daucus carota HOM05D005155 ORTHO05D006266 7.0e-50 202.6 506 37.9
TPR.G35685 Trifolium pratense HOM05D005155 ORTHO05D006266 1.2e-49 201.8 279 53.4
Aa31LG4G7530 Aethionema arabicum HOM05D005155 ORTHO05D006266 1.6e-49 201.4 491 34.6
C09p04670 Brassica napus HOM05D005155 ORTHO05D006266 3.5e-49 200.3 490 34.5
THA.LOC104819027 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 4.5e-49 199.9 492 39.4
BraA09t36073Z Brassica rapa HOM05D005155 ORTHO05D006266 7.7e-49 199.1 494 35.0
A09p04360 Brassica napus HOM05D005155 ORTHO05D006266 1.3e-48 198.4 491 34.6
arahy.Tifrunner.gnm1.ann1.ZBS9GV Arachis hypogaea HOM05D005155 ORTHO05D006266 2.9e-48 197.2 509 35.8
Sopen05g001730 Solanum pennellii HOM05D005155 ORTHO05D006266 2.9e-48 197.2 521 39.2
BcaB04g19566 Brassica carinata HOM05D005155 ORTHO05D006266 3.8e-48 196.8 492 34.6
BolC9t53395H Brassica oleracea HOM05D005155 ORTHO05D006266 5.0e-48 196.4 496 34.7
AT5G48240 Arabidopsis thaliana HOM05D005155 ORTHO05D006266 6.5e-48 196.1 488 35.0
arahy.Tifrunner.gnm1.ann1.FV1RU3 Arachis hypogaea HOM05D005155 ORTHO05D006266 6.5e-48 196.1 509 35.6
Solyc05g005730.4 Solanum lycopersicum HOM05D005155 ORTHO05D006266 1.1e-47 195.3 529 39.3
MSTRG.6620 Avicennia marina HOM05D005155 ORTHO05D006266 2.5e-47 194.1 234 55.6
Cc02_g33980 Coffea canephora HOM05D005155 ORTHO05D006266 9.4e-47 192.2 388 36.9
BcaC04g23785 Brassica carinata HOM05D005155 ORTHO05D006266 1.2e-46 191.8 490 33.5
AL8G20970 Arabidopsis lyrata HOM05D005155 ORTHO05D006266 2.1e-46 191.0 489 33.7
Migut.M00065 Erythranthe guttata HOM05D005155 ORTHO05D006266 2.1e-46 191.0 528 33.9
PGSC0003DMG400004112 Solanum tuberosum HOM05D005155 ORTHO05D006266 2.1e-46 191.0 530 38.3
Ah.08g210400 Amaranthus hybridus HOM05D005155 ORTHO05D006266 1.4e-45 188.3 433 35.3
CAN.G1447.4 Capsicum annuum HOM05D005155 ORTHO05D006266 1.8e-45 188.0 528 38.3
Peaxi162Scf00359g00214 Petunia axillaris HOM05D005155 ORTHO05D006266 6.8e-45 186.0 487 36.6
A06p39310 Brassica napus HOM05D005155 ORTHO05D006266 8.8e-45 185.7 394 36.5
C07p38970 Brassica napus HOM05D005155 ORTHO05D006266 1.5e-44 184.9 488 33.6
Lsat_1_v5_gn_0_13881 Lactuca sativa HOM05D005155 ORTHO05D006266 2.6e-44 184.1 504 39.1
SalBow7G0407 Salvia bowleyana HOM05D005155 ORTHO05D006266 1.7e-43 181.4 493 37.3
Gohir.A11G147700 Gossypium hirsutum HOM05D005155 ORTHO05D006266 2.8e-43 180.6 447 35.8
MBI04_g26115_MAGBIO Magnolia biondii HOM05D005155 ORTHO05D006266 1.8e-42 177.9 509 33.0
Sc20g0004590 Simmondsia chinensis HOM05D005155 ORTHO05D006266 3.1e-42 177.2 505 30.9
CARHR286520 Cardamine hirsuta HOM05D005155 ORTHO05D006266 7.0e-42 176.0 498 35.5
Ca_02017_v3 Cicer arietinum L. HOM05D005155 ORTHO05D006266 2.7e-41 174.1 517 37.3
COL.COLO4_19654 Corchorus olitorius HOM05D005155 ORTHO05D006266 2.7e-41 174.1 350 38.0
Ah.08g219720 Amaranthus hybridus HOM05D005155 ORTHO05D006266 5.9e-41 172.9 457 36.5
BraA06t26845Z Brassica rapa HOM05D005155 ORTHO05D006266 1.0e-40 172.2 398 36.2
HPP92_009941 Vanilla planifolia HOM05D005155 ORTHO05D006266 1.0e-40 172.2 266 47.4
HanXRQChr01g0006811 Helianthus annuus HOM05D005155 ORTHO05D006266 1.3e-40 171.8 507 33.5
CiPaw.03G283900 Carya illinoinensis HOM05D005155 ORTHO05D006266 2.2e-40 171.0 498 33.1
AUR62030994 Chenopodium quinoa HOM05D005155 ORTHO05D006266 8.5e-40 169.1 381 34.9
unitig_26.g9470 Utricularia gibba HOM05D003767 ORTHO05D004507 1.9e-39 167.9 229 48.9
CARHR218550 Cardamine hirsuta HOM05D005155 ORTHO05D006266 2.5e-39 167.5 451 35.0
BolC7t44418H Brassica oleracea HOM05D005155 ORTHO05D006266 1.6e-38 164.9 158 62.7
BcaC06g30816 Brassica carinata HOM05D005155 ORTHO05D006266 2.7e-38 164.1 486 32.7
EL10Ac5g10791 Beta vulgaris HOM05D005155 ORTHO05D006266 6.1e-38 162.9 465 34.6
PSO210G0096 Papaver somniferum HOM05D005155 ORTHO05D006266 6.8e-37 159.5 507 31.6
CAN.G715.5 Capsicum annuum HOM05D005155 ORTHO05D006266 1.5e-36 158.3 240 54.2
ECA248G0062 Erigeron canadensis HOM05D005155 ORTHO05D006266 1.5e-36 158.3 539 34.1
PSO782G4695 Papaver somniferum HOM05D005155 ORTHO05D006266 1.7e-35 154.8 502 29.1
Cc00_g18660 Coffea canephora HOM05D005155 ORTHO05D006266 6.3e-35 152.9 128 66.4
Lj1A800T38 Lonicera japonica HOM05D005155 ORTHO05D006266 3.1e-34 150.6 338 38.2
CDE09G0959 Ceratophyllum demersum HOM05D005155 ORTHO05D006266 5.4e-34 149.8 249 43.0
Nn3g19477 Nelumbo nucifera HOM05D005155 ORTHO05D006266 1.3e-32 145.2 488 29.7
Cc00_g14350 Coffea canephora HOM05D005155 ORTHO05D006266 1.7e-32 144.8 130 63.1
Cc07_g20190 Coffea canephora HOM05D005155 ORTHO05D006266 8.6e-32 142.5 125 64.0
QL01p014609 Quercus lobata HOM05D005155 ORTHO05D006266 4.7e-30 136.7 113 65.5
AUR62008242 Chenopodium quinoa HOM05D005155 ORTHO05D006266 3.0e-29 134.0 108 67.6
Os11g0266000 Oryza sativa ssp. japonica HOM05D005155 ORTHO05D006266 6.8e-29 132.9 231 44.2
QL03p064628 Quercus lobata HOM05D005155 ORTHO05D006266 8.9e-29 132.5 264 44.3
PSO782G0752 Papaver somniferum HOM05D005155 ORTHO05D006266 9.8e-28 129.0 209 45.9
PSO782G5585 Papaver somniferum HOM05D005155 ORTHO05D006266 2.9e-27 127.5 246 39.4
SEGI_31719 Sequoiadendron giganteum HOM05D005155 ORTHO05D006266 2.9e-27 127.5 148 53.4
Zm00001eb298370 Zea mays HOM05D005155 ORTHO05D006266 1.1e-26 125.6 135 53.3
ATR0225G032 Amborella trichopoda HOM05D005155 ORTHO05D006266 1.4e-26 125.2 252 38.9
Nn1g02050 Nelumbo nucifera HOM05D005155 ORTHO05D006266 8.6e-24 115.9 493 28.4
MD17G1119400 Malus domestica HOM05D005155 ORTHO05D006266 4.7e-22 110.2 80 68.8
Nn1g02049 Nelumbo nucifera HOM05D005155 ORTHO05D006266 7.5e-20 102.8 181 42.0
Hma1.2p1_1388F.1_g279940 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 4.9e-19 100.1 67 76.1
Cc00_g29960 Coffea canephora HOM05D005155 ORTHO05D006266 1.1e-18 99.0 93 59.1
Cc07_g20180 Coffea canephora HOM05D005155 ORTHO05D006266 1.3e-16 92.0 88 55.7
AagrBONN_evm.TU.Sc2ySwM_368.2873 Anthoceros agrestis HOM05D005155 ORTHO05D006266 4.4e-12 77.0 148 39.2
Lj1A800T39 Lonicera japonica HOM05D005155 ORTHO05D006266 1.3e-11 75.5 53 71.7
A02p30930 Brassica napus HOM05D005155 ORTHO05D006266 2.3e-08 64.7 51 66.7
QL03p064635 Quercus lobata HOM05D005155 ORTHO05D006266 3.0e-08 64.3 45 75.6
CBR_g23113 Chara braunii HOM05D005155 ORTHO05D006266 9.5e-07 59.3 141 36.2
Mapoly0148s0006 Marchantia polymorpha HOM05D005155 ORTHO05D006266 2.8e-06 57.8 154 34.4


User provided reference genes

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