Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p063754 Quercus lobata HOM05D000028 ORTHO05D010995 1.8e-44 182.2 89 100.0
QL04p064086 Quercus lobata HOM05D000028 ORTHO05D010995 8.8e-20 100.1 59 83.1
QL04p063727 Quercus lobata HOM05D000028 ORTHO05D010995 2.8e-18 95.1 59 81.4
QL04p064158 Quercus lobata HOM05D000028 ORTHO05D010995 2.8e-18 95.1 59 81.4
QL04p064122 Quercus lobata HOM05D000028 ORTHO05D010995 3.1e-17 91.7 59 79.7
Prupe.3G183600 Prunus persica HOM05D000028 ORTHO05D000296 3.3e-14 81.6 58 63.8
QL04p064019 Quercus lobata HOM05D000028 ORTHO05D010995 1.6e-13 79.3 58 70.7
Haze_13665 Corylus avellana HOM05D000028 ORTHO05D010995 6.1e-13 77.4 79 57.0
QL04p063892 Quercus lobata HOM05D000028 ORTHO05D010995 1.4e-12 76.3 58 65.5
CiPaw.13G071400 Carya illinoinensis HOM05D000028 ORTHO05D010995 2.3e-12 75.5 58 63.8
RcHm_v2.0_Chr2g0153061 Rosa chinensis HOM05D000028 ORTHO05D010995 3.0e-12 75.1 59 62.7
Haze_13656 Corylus avellana HOM05D000028 ORTHO05D010995 8.9e-12 73.6 58 67.2
Cfa023196 Carpinus fangiana HOM05D000028 ORTHO05D010995 1.5e-11 72.8 58 65.5
FvH4_6g39220 Fragaria vesca HOM05D000028 ORTHO05D010995 2.0e-11 72.4 59 62.7
RcHm_v2.0_Chr2g0122881 Rosa chinensis HOM05D000028 ORTHO05D010995 4.4e-11 71.2 59 61.0
CiPaw.03G108400 Carya illinoinensis HOM05D000028 ORTHO05D010995 7.5e-11 70.5 59 61.0
FAN05G4459 Fragaria x ananassa HOM05D000028 ORTHO05D010995 7.5e-11 70.5 59 61.0
RcHm_v2.0_Chr2g0153031 Rosa chinensis HOM05D000028 ORTHO05D010995 9.8e-11 70.1 59 59.3
FAN14G1700 Fragaria x ananassa HOM05D000028 ORTHO05D010995 1.7e-10 69.3 59 61.0
GSVIVG01015903001 Vitis vinifera HOM05D000028 ORTHO05D010995 3.7e-10 68.2 60 61.7
CiPaw.03G108300 Carya illinoinensis HOM05D000028 ORTHO05D010995 4.9e-10 67.8 57 57.9
Duzib138G0061 Durio zibethinus HOM05D000028 ORTHO05D010995 4.9e-10 67.8 58 56.9
Ciclev10012483m.g Citrus clementina HOM05D000028 ORTHO05D010995 1.4e-09 66.2 59 59.3
Nn7g38386 Nelumbo nucifera HOM05D000028 ORTHO05D000296 3.1e-09 65.1 58 56.9
MBI04_g02618_MAGBIO Magnolia biondii HOM05D000028 ORTHO05D010995 1.2e-08 63.2 60 51.7
Manes.07G057200 Manihot esculenta HOM05D000028 ORTHO05D010995 3.5e-08 61.6 59 54.2
FvH4_7g19740 Fragaria vesca HOM05D000028 ORTHO05D010995 4.5e-08 61.2 53 58.5
Ciclev10013415m.g Citrus clementina HOM05D000028 ORTHO05D010995 1.0e-07 60.1 47 63.8
Nn2g11878 Nelumbo nucifera HOM05D000028 ORTHO05D010995 2.3e-07 58.9 58 50.0
CANSAT64G2773 Cannabis sativa HOM05D000028 ORTHO05D010995 2.9e-07 58.5 61 49.2
Lsat_1_v5_gn_5_156100 Lactuca sativa HOM05D000028 ORTHO05D000296 5.0e-07 57.8 63 52.4
COL.COLO4_17918 Corchorus olitorius HOM05D000028 ORTHO05D010995 8.6e-07 57.0 59 49.2
Cpa.g.sc4.128 Carica papaya HOM05D000028 ORTHO05D010995 1.9e-06 55.8 45 60.0
ClCG11G013090 Citrullus lanatus HOM05D000028 ORTHO05D000296 2.5e-06 55.5 58 48.3
CsaV3_5G029570 Cucumis sativus L. HOM05D000028 ORTHO05D000296 2.5e-06 55.5 59 52.5
QL07p013283 Quercus lobata HOM05D000028 ORTHO05D000296 3.3e-06 55.1 63 46.0
CDE09G1069 Ceratophyllum demersum HOM05D000028 ORTHO05D000296 4.3e-06 54.7 63 46.0
Ciclev10012013m.g Citrus clementina HOM05D000028 ORTHO05D000296 4.3e-06 54.7 63 49.2
Nitab4.5_0007254g0060 Nicotiana tabacum HOM05D000028 ORTHO05D000390 4.3e-06 54.7 58 48.3
MELO3C009739.2 Cucumis melo HOM05D000028 ORTHO05D000296 5.6e-06 54.3 74 44.6
Dinv40408 Davidia involucrata HOM05D000028 ORTHO05D000296 5.6e-06 54.3 58 48.3
HanXRQChr13g0422351 Helianthus annuus HOM05D000028 ORTHO05D000296 5.6e-06 54.3 63 49.2
Peaxi162Scf00601g00035 Petunia axillaris HOM05D000028 ORTHO05D000296 5.6e-06 54.3 63 44.4
TWI38G2171 Tripterygium wilfordii HOM05D000028 ORTHO05D000296 5.6e-06 54.3 63 47.6
COL.COLO4_20001 Corchorus olitorius HOM05D000028 ORTHO05D010011 7.3e-06 53.9 58 53.4
GSVIVG01036586001 Vitis vinifera HOM05D000028 ORTHO05D000296 7.3e-06 53.9 61 44.3
Ciclev10001335m.g Citrus clementina HOM05D000028 ORTHO05D000296 9.5e-06 53.5 63 44.4
MELO3C011801.2 Cucumis melo HOM05D000028 ORTHO05D000296 9.5e-06 53.5 58 48.3
Nitab4.5_0001952g0080 Nicotiana tabacum HOM05D000028 ORTHO05D000390 9.5e-06 53.5 59 50.8


User provided reference genes

Program Settings