Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p062033 Quercus lobata HOM05D008232 ORTHO05D010390 1.0e-50 203.0 95 100.0
Prupe.3G107800 Prunus persica HOM05D008232 ORTHO05D010390 2.5e-28 128.6 95 61.1
CiPaw.03G112900 Carya illinoinensis HOM05D008232 ORTHO05D010390 7.2e-28 127.1 95 66.3
Potri.010G248600 Populus trichocarpa HOM05D008232 ORTHO05D010390 1.6e-27 125.9 96 65.6
FAN02G3893 Fragaria x ananassa HOM05D008232 ORTHO05D010390 3.6e-27 124.8 99 59.6
FvH4_6g27930 Fragaria vesca HOM05D008232 ORTHO05D010390 1.8e-26 122.5 99 58.6
FAN05G2300 Fragaria x ananassa HOM05D008232 ORTHO05D010390 8.8e-26 120.2 99 56.6
FAN14G2943 Fragaria x ananassa HOM05D008232 ORTHO05D010390 8.8e-26 120.2 99 58.6
Eucgr.J03142 Eucalyptus grandis HOM05D008232 ORTHO05D010390 2.6e-25 118.6 99 59.6
Ciclev10026814m.g Citrus clementina HOM05D008232 ORTHO05D010390 7.5e-25 117.1 103 58.3
MD09G1231600 Malus domestica HOM05D008232 ORTHO05D010390 1.3e-24 116.3 96 55.2
PGR031G2543 Punica granatum HOM05D008232 ORTHO05D010390 3.1e-23 111.7 96 57.3
Migut.I00645 Erythranthe guttata HOM05D008232 ORTHO05D010390 1.6e-22 109.4 96 58.3
Peaxi162Scf00207g00211 Petunia axillaris HOM05D005461 ORTHO05D007157 1.6e-22 109.4 91 58.2
Thecc.06G043900 Theobroma cacao HOM05D000051 ORTHO05D000015 2.7e-22 108.6 95 54.7
FAN09G3435 Fragaria x ananassa HOM05D008232 ORTHO05D010390 4.5e-22 107.8 96 53.1
Dinv23254 Davidia involucrata HOM05D008232 ORTHO05D010390 1.3e-21 106.3 95 56.8
Duzib235G0354 Durio zibethinus HOM05D008232 ORTHO05D010390 3.8e-21 104.8 95 52.6
RcHm_v2.0_Chr2g0131491 Rosa chinensis HOM05D008232 ORTHO05D010390 8.5e-21 103.6 82 58.5
Solyc06g068660.3 Solanum lycopersicum HOM05D008232 ORTHO05D010390 2.5e-20 102.1 90 52.2
Sopen06g025940 Solanum pennellii HOM05D008232 ORTHO05D010390 2.5e-20 102.1 90 52.2
Oeu036452.1 Olea europaea HOM05D008232 ORTHO05D010390 5.5e-20 100.9 95 52.6
HanXRQChr09g0274311 Helianthus annuus HOM05D008232 ORTHO05D010390 2.7e-19 98.6 97 51.5
Cfa023521 Carpinus fangiana HOM05D008232 ORTHO05D010390 6.1e-19 97.4 76 63.2
MELO3C016243.2 Cucumis melo HOM05D008232 ORTHO05D010390 6.1e-19 97.4 97 50.5
CsaV3_4G007020 Cucumis sativus L. HOM05D008232 ORTHO05D010390 6.1e-19 97.4 97 50.5
Sed0014962 Sechium edule HOM05D008232 ORTHO05D010390 6.1e-19 97.4 97 50.5
THA.LOC104813941 Tarenaya hassleriana HOM05D008232 ORTHO05D010390 3.0e-18 95.1 94 53.2
Carub.0002s1989 Capsella rubella HOM05D008232 ORTHO05D010390 6.8e-18 94.0 101 54.5
AL2G32870 Arabidopsis lyrata HOM05D008232 ORTHO05D010390 8.8e-18 93.6 101 53.5
Thhalv10019346m.g Eutrema salsugineum HOM05D008232 ORTHO05D010390 8.8e-18 93.6 101 53.5
AT1G73120 Arabidopsis thaliana HOM05D008232 ORTHO05D010390 1.2e-17 93.2 101 53.5
CARHR066090 Cardamine hirsuta HOM05D008232 ORTHO05D010390 1.2e-17 93.2 100 53.0
Sp5g28080 Schrenkiella parvula HOM05D008232 ORTHO05D010390 1.2e-17 93.2 101 53.5
A07p39100 Brassica napus HOM05D008232 ORTHO05D010390 5.7e-17 90.9 102 50.0
Gohir.A05G117900 Gossypium hirsutum HOM05D008232 ORTHO05D010390 7.5e-17 90.5 96 52.1
Gohir.D05G118800 Gossypium hirsutum HOM05D008232 ORTHO05D010390 1.3e-16 89.7 96 51.0
BolC6t39770H Brassica oleracea HOM05D008232 ORTHO05D010390 1.7e-16 89.4 102 50.0
BraA07t31461Z Brassica rapa HOM05D008232 ORTHO05D010390 1.7e-16 89.4 102 49.0
TWI31G1109 Tripterygium wilfordii HOM05D008232 ORTHO05D010390 1.7e-16 89.4 97 46.4
Aa31LG4G3390 Aethionema arabicum HOM05D008232 ORTHO05D010390 2.2e-16 89.0 100 51.0
C06p47310 Brassica napus HOM05D008232 ORTHO05D010390 2.2e-16 89.0 102 50.0
Atru.chr1.2756 Acer truncatum HOM05D008232 ORTHO05D010390 3.7e-16 88.2 101 49.5
A02p18450 Brassica napus HOM05D008232 ORTHO05D010390 3.7e-16 88.2 103 48.5
BraA02t06884Z Brassica rapa HOM05D008232 ORTHO05D010390 3.7e-16 88.2 103 48.5
Gorai.009G122800 Gossypium raimondii HOM05D008232 ORTHO05D010390 3.7e-16 88.2 96 50.0
Lsat_1_v5_gn_4_85220 Lactuca sativa HOM05D008232 ORTHO05D010390 3.7e-16 88.2 99 45.5
Cpa.g.sc2471.1 Carica papaya HOM05D008232 ORTHO05D010390 8.3e-16 87.0 81 51.9
Manes.06G016400 Manihot esculenta HOM05D008232 ORTHO05D010390 2.4e-15 85.5 104 47.1
Nitab4.5_0004890g0010 Nicotiana tabacum HOM05D008232 ORTHO05D010390 3.1e-15 85.1 82 50.0
C02p30580 Brassica napus HOM05D008232 ORTHO05D010390 5.4e-15 84.3 103 48.5
SalBow7G0137 Salvia bowleyana HOM05D008232 ORTHO05D010390 7.0e-15 84.0 88 47.7
COL.COLO4_26749 Corchorus olitorius HOM05D008232 ORTHO05D010390 2.7e-14 82.0 74 52.7
PSO478G5163 Papaver somniferum HOM05D008232 ORTHO05D010390 2.7e-14 82.0 99 43.4
TAR383G0592 Trochodendron aralioides HOM05D008232 ORTHO05D010390 2.9e-13 78.6 95 41.1
CANSAT64G1479 Cannabis sativa HOM05D008232 ORTHO05D010390 3.8e-13 78.2 109 45.9
Hund22378 Selenicereus undatus HOM05D008232 ORTHO05D010390 3.8e-13 78.2 101 38.6
ClCG07G011230 Citrullus lanatus HOM05D008232 ORTHO05D010390 3.2e-12 75.1 84 42.9
Cc04_g05510 Coffea canephora HOM05D000169 ORTHO05D001214 5.5e-12 74.3 85 43.5
PSO782G2603 Papaver somniferum HOM05D008232 ORTHO05D010390 5.5e-12 74.3 96 45.8
Sc10g0006420 Simmondsia chinensis HOM05D008232 ORTHO05D010390 9.5e-12 73.6 93 41.9
Aqoxy7G03060 Aquilegia oxysepala HOM05D008232 ORTHO05D010390 2.1e-11 72.4 95 38.9
Sc10g0006360 Simmondsia chinensis HOM05D008232 ORTHO05D010390 1.4e-10 69.7 93 39.8
Actinidia08925 Actinidia chinensis HOM05D008232 ORTHO05D010390 6.3e-08 60.8 61 47.5
MBI14_g17362_MAGBIO Magnolia biondii HOM05D008232 ORTHO05D010390 1.8e-07 59.3 90 35.6
Peaxi162Scf00003g00261 Petunia axillaris HOM05D006153 ORTHO05D007701 5.9e-06 54.3 56 44.6


User provided reference genes

Program Settings