Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p056327 Quercus lobata HOM05D001828 ORTHO05D009885 9.0e-36 152.9 70 100.0
QL93p1800_0008 Quercus lobata HOM05D000004 ORTHO05D000002 5.7e-30 133.7 63 95.2
QL02p029509 Quercus lobata HOM05D001828 ORTHO05D001745 2.2e-29 131.7 63 93.7
QL02p029498 Quercus lobata HOM05D001828 ORTHO05D001745 1.1e-28 129.4 63 92.1
Sopen00g001870 Solanum pennellii HOM05D003608 ORTHO05D000917 1.4e-28 129.0 65 90.8
QL02p004526 Quercus lobata HOM05D001828 ORTHO05D001745 6.9e-28 126.7 62 91.9
unitig_135.g35493 Utricularia gibba HOM05D001029 ORTHO05D009885 1.5e-27 125.6 67 86.6
unitig_676.g29551 Utricularia gibba HOM05D001029 ORTHO05D000917 1.5e-27 125.6 67 86.6
CSS0027849 Camellia sinensis var. sinensis HOM05D001828 ORTHO05D001745 4.5e-27 124.0 61 91.8
arahy.Tifrunner.gnm1.ann1.CYZ3KW Arachis hypogaea HOM05D001828 ORTHO05D001745 5.9e-27 123.6 64 87.5
arahy.Tifrunner.gnm1.ann1.V6U7IH Arachis hypogaea HOM05D001828 ORTHO05D001745 5.9e-27 123.6 64 87.5
arahy.Tifrunner.gnm1.ann1.HA5ZC6 Arachis hypogaea HOM05D001828 ORTHO05D009885 1.7e-26 122.1 64 85.9
CSS0048211 Camellia sinensis var. sinensis HOM05D001828 ORTHO05D009885 3.8e-26 120.9 62 87.1
FAN07G1979 Fragaria x ananassa HOM05D029018 ORTHO05D009885 1.9e-25 118.6 57 93.0
CDE02G0001 Ceratophyllum demersum HOM05D001828 ORTHO05D001745 4.2e-25 117.5 62 83.9
CDE02G2883 Ceratophyllum demersum HOM05D001828 ORTHO05D001745 4.2e-25 117.5 62 83.9
CDE02G3303 Ceratophyllum demersum HOM05D001828 ORTHO05D001745 4.2e-25 117.5 62 83.9
FAN25G1010 Fragaria x ananassa HOM05D008177 ORTHO05D010128 5.5e-25 117.1 62 85.5
Oeu020383.1 Olea europaea HOM05D000920 ORTHO05D004854 5.5e-25 117.1 65 81.5
ScUNg0000970 Simmondsia chinensis HOM05D007167 ORTHO05D009885 5.5e-25 117.1 61 86.9
CSS0047713 Camellia sinensis var. sinensis HOM05D001828 ORTHO05D001745 7.2e-25 116.7 61 86.9
EL10As7g23711 Beta vulgaris HOM05D001828 ORTHO05D001745 1.4e-23 112.5 63 82.5
Atru.chr10.37 Acer truncatum HOM05D001828 ORTHO05D001745 1.8e-23 112.1 53 94.3
Atru.chr10.43 Acer truncatum HOM05D001828 ORTHO05D001745 1.8e-23 112.1 53 94.3
Atru.chr9.1 Acer truncatum HOM05D001828 ORTHO05D001745 1.8e-23 112.1 53 94.3
Atru.chr9.218 Acer truncatum HOM05D001828 ORTHO05D001745 1.8e-23 112.1 53 94.3
arahy.Tifrunner.gnm1.ann1.B2M0SA Arachis hypogaea HOM05D001828 ORTHO05D001745 3.9e-23 110.9 57 86.0
FAN28G0217 Fragaria x ananassa HOM05D029018 ORTHO05D009885 1.1e-22 109.4 52 94.2
CSS0030230 Camellia sinensis var. sinensis HOM05D001828 ORTHO05D001745 5.7e-22 107.1 56 85.7
Psat3g188680 Pisum sativum HOM05D003608 ORTHO05D010128 5.7e-22 107.1 53 90.6
PGSC0003DMG400044276 Solanum tuberosum HOM05D001828 ORTHO05D001745 2.2e-21 105.1 52 90.4
EL10Ac2g03013 Beta vulgaris HOM05D001828 ORTHO05D001745 3.7e-21 104.4 63 76.2
Sc06g0003800 Simmondsia chinensis HOM05D001828 ORTHO05D009885 7.7e-19 96.7 55 83.6
PGSC0003DMG400035737 Solanum tuberosum HOM05D001828 ORTHO05D001745 1.7e-18 95.5 46 93.5
Oeu006837.1 Olea europaea HOM05D001828 ORTHO05D001745 2.2e-18 95.1 50 84.0
Sc06g0003810 Simmondsia chinensis HOM05D007167 ORTHO05D009885 1.1e-17 92.8 69 62.3
Sopen07g009460 Solanum pennellii HOM05D003608 ORTHO05D010452 1.4e-17 92.4 64 68.8
CSS0047100 Camellia sinensis var. sinensis HOM05D001828 ORTHO05D001745 2.1e-16 88.6 63 66.7
FAN08G2289 Fragaria x ananassa HOM05D001828 ORTHO05D009885 3.6e-16 87.8 45 86.7
QL93p0381_0031 Quercus lobata HOM05D007855 ORTHO05D003704 4.7e-16 87.4 47 83.0
QL93p0428_0015 Quercus lobata HOM05D001828 ORTHO05D009885 4.7e-16 87.4 47 83.0
unitig_807.g34420 Utricularia gibba HOM05D001029 ORTHO05D009885 8.8e-15 83.2 41 95.1
LjContig00371g0019658 Lotus japonicus HOM05D001828 ORTHO05D000917 2.2e-13 78.6 39 87.2
LjContig00372g0002420 Lotus japonicus HOM05D001828 ORTHO05D000917 2.2e-13 78.6 39 87.2
Oeu009467.1 Olea europaea HOM05D003608 ORTHO05D009885 2.2e-13 78.6 40 95.0
Medtr0055s0130 Medicago truncatula HOM05D001828 ORTHO05D001745 4.8e-13 77.4 37 91.9
Medtr5g031940 Medicago truncatula HOM05D001828 ORTHO05D009885 8.5e-10 66.6 41 75.6
Sopen00g005120 Solanum pennellii HOM05D000691 ORTHO05D000378 8.5e-10 66.6 44 65.9
PGSC0003DMG400044154 Solanum tuberosum HOM05D001828 ORTHO05D009885 1.2e-08 62.8 48 60.4
Psat7g211960 Pisum sativum HOM05D001828 ORTHO05D001745 2.7e-08 61.6 31 83.9
Duzib217G0002 Durio zibethinus HOM05D001828 ORTHO05D001745 2.3e-07 58.5 33 75.8
Duzib250G0005 Durio zibethinus HOM05D001828 ORTHO05D001745 2.3e-07 58.5 33 75.8
EL10As19g24180 Beta vulgaris HOM05D000920 ORTHO05D004854 7.5e-06 53.5 31 74.2


User provided reference genes

Program Settings