Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p052584 Quercus lobata HOM05D005192 ORTHO05D006023 1.2e-65 253.1 134 100.0
TWI32G1299 Tripterygium wilfordii HOM05D005192 ORTHO05D006023 2.0e-31 139.4 89 76.4
Duzib177G0632 Durio zibethinus HOM05D005192 ORTHO05D006023 4.4e-31 138.3 91 75.8
PGR042G1459 Punica granatum HOM05D005192 ORTHO05D006023 9.8e-31 137.1 89 78.7
COL.COLO4_08549 Corchorus olitorius HOM05D005192 ORTHO05D006023 1.3e-30 136.7 88 77.3
Cpa.g.sc73.77 Carica papaya HOM05D005192 ORTHO05D006023 2.2e-30 136.0 89 76.4
Manes.09G132000 Manihot esculenta HOM05D005192 ORTHO05D006023 2.2e-30 136.0 91 70.3
Ciclev10032932m.g Citrus clementina HOM05D005192 ORTHO05D006023 2.9e-30 135.6 91 74.7
Hund26918 Selenicereus undatus HOM05D005192 ORTHO05D006023 3.7e-30 135.2 86 79.1
Gohir.D11G235900 Gossypium hirsutum HOM05D005192 ORTHO05D006023 4.9e-30 134.8 89 75.3
Gorai.007G248800 Gossypium raimondii HOM05D005192 ORTHO05D006023 4.9e-30 134.8 89 75.3
Gohir.A13G082000 Gossypium hirsutum HOM05D005192 ORTHO05D006023 8.3e-30 134.0 86 75.6
Duzib128G1721 Durio zibethinus HOM05D005192 ORTHO05D006023 1.1e-29 133.7 89 75.3
THA.LOC104805728 Tarenaya hassleriana HOM05D005192 ORTHO05D006023 1.4e-29 133.3 84 81.0
Sabra13G0062500 Salix brachista HOM05D005192 ORTHO05D006023 1.9e-29 132.9 91 71.4
Gohir.A11G222400 Gossypium hirsutum HOM05D005192 ORTHO05D006023 2.4e-29 132.5 89 74.2
Gohir.D13G100100 Gossypium hirsutum HOM05D005192 ORTHO05D006023 3.2e-29 132.1 86 74.4
Gorai.013G112500 Gossypium raimondii HOM05D005192 ORTHO05D006023 3.2e-29 132.1 86 74.4
Potri.013G072600 Populus trichocarpa HOM05D005192 ORTHO05D006023 3.2e-29 132.1 91 71.4
Atru.chr2.1677 Acer truncatum HOM05D005192 ORTHO05D006023 5.4e-29 131.3 89 73.0
Aa31LG2G2090 Aethionema arabicum HOM05D005192 ORTHO05D006023 5.4e-29 131.3 89 75.3
Prupe.2G101300 Prunus persica HOM05D005192 ORTHO05D006023 7.0e-29 131.0 89 75.3
Sc26g0002010 Simmondsia chinensis HOM05D005192 ORTHO05D006023 7.0e-29 131.0 86 75.6
CANSAT01G0826 Cannabis sativa HOM05D005192 ORTHO05D006023 9.2e-29 130.6 91 71.4
Thecc.05G232400 Theobroma cacao HOM05D005192 ORTHO05D006023 9.2e-29 130.6 86 77.9
Hma1.2p1_0353F.1_g133370 Hydrangea macrophylla HOM05D005192 ORTHO05D006023 1.2e-28 130.2 89 76.4
Carub.0012s0005 Capsella rubella HOM05D005192 ORTHO05D006023 1.6e-28 129.8 88 75.0
Haze_15802 Corylus avellana HOM05D005192 ORTHO05D006023 1.6e-28 129.8 88 75.0
CiPaw.02G036100 Carya illinoinensis HOM05D005192 ORTHO05D006023 3.5e-28 128.6 87 78.2
CARHR056260 Cardamine hirsuta HOM05D005192 ORTHO05D006023 4.6e-28 128.3 83 77.1
GSVIVG01011324001 Vitis vinifera HOM05D005192 ORTHO05D006023 6.0e-28 127.9 91 71.4
Dinv43977 Davidia involucrata HOM05D005192 ORTHO05D006023 7.8e-28 127.5 85 75.3
Eucgr.E01765 Eucalyptus grandis HOM05D005192 ORTHO05D006023 7.8e-28 127.5 89 73.0
Cc02_g26360 Coffea canephora HOM05D005192 ORTHO05D006023 1.0e-27 127.1 91 68.1
Lj7A558T36 Lonicera japonica HOM05D005192 ORTHO05D006023 1.0e-27 127.1 88 70.5
Nitab4.5_0004594g0120 Nicotiana tabacum HOM05D005192 ORTHO05D006023 1.0e-27 127.1 88 67.0
Nitab4.5_0004800g0050 Nicotiana tabacum HOM05D005192 ORTHO05D006023 1.0e-27 127.1 88 67.0
BcaB05g24444 Brassica carinata HOM05D005192 ORTHO05D006023 1.7e-27 126.3 83 77.1
TPR.G17364 Trifolium pratense HOM05D005192 ORTHO05D006023 1.7e-27 126.3 92 68.5
AT1G64850 Arabidopsis thaliana HOM05D005192 ORTHO05D006023 2.3e-27 125.9 83 73.5
AL2G19260 Arabidopsis lyrata HOM05D005192 ORTHO05D006023 3.0e-27 125.6 83 74.7
Actinidia05822 Actinidia chinensis HOM05D005192 ORTHO05D006023 3.9e-27 125.2 88 71.6
AUR62014514 Chenopodium quinoa HOM05D000462 ORTHO05D006023 3.9e-27 125.2 88 72.7
Thhalv10011151m.g Eutrema salsugineum HOM05D005192 ORTHO05D006023 3.9e-27 125.2 80 77.5
Psat4g215840 Pisum sativum HOM05D005192 ORTHO05D006023 6.6e-27 124.4 87 71.3
Solyc01g081190.4 Solanum lycopersicum HOM05D005192 ORTHO05D006023 6.6e-27 124.4 88 65.9
Sopen01g032770 Solanum pennellii HOM05D005192 ORTHO05D006023 6.6e-27 124.4 88 65.9
PGSC0003DMG400001805 Solanum tuberosum HOM05D005192 ORTHO05D006023 8.6e-27 124.0 85 68.2
Medtr8g009870 Medicago truncatula HOM05D005192 ORTHO05D006023 1.5e-26 123.2 87 69.0
BcaC03g15075 Brassica carinata HOM05D005192 ORTHO05D006023 2.5e-26 122.5 83 73.5
BcaC03g15076 Brassica carinata HOM05D005192 ORTHO05D006023 2.5e-26 122.5 83 73.5
A02p15850 Brassica napus HOM05D005192 ORTHO05D006023 2.5e-26 122.5 83 73.5
C02p26310 Brassica napus HOM05D005192 ORTHO05D006023 2.5e-26 122.5 83 73.5
BolC2t08702H Brassica oleracea HOM05D005192 ORTHO05D006023 2.5e-26 122.5 83 73.5
Ca_25887_v3 Cicer arietinum L. HOM05D000403 ORTHO05D000350 2.5e-26 122.5 92 69.6
AUR62038020 Chenopodium quinoa HOM05D005192 ORTHO05D006023 3.3e-26 122.1 88 71.6
SGA_v2.0_scaffold98G29401 Striga asiatica HOM05D005192 ORTHO05D006023 3.3e-26 122.1 90 66.7
Peaxi162Scf00592g00452 Petunia axillaris HOM05D005192 ORTHO05D006023 4.3e-26 121.7 81 71.6
Phvul.010G038600 Phaseolus vulgaris HOM05D005192 ORTHO05D006023 5.6e-26 121.3 89 70.8
Nitab4.5_0005106g0020 Nicotiana tabacum HOM05D005192 ORTHO05D006023 9.5e-26 120.6 86 68.6
PSO782G4714 Papaver somniferum HOM05D005192 ORTHO05D006023 9.5e-26 120.6 91 65.9
CAN.G700.32 Capsicum annuum HOM05D005192 ORTHO05D006023 1.6e-25 119.8 86 64.0
CiPaw.01G068900 Carya illinoinensis HOM05D005192 ORTHO05D006023 2.1e-25 119.4 90 68.9
Lalb_Chr07g0194821 Lupinus albus HOM05D005192 ORTHO05D006023 2.1e-25 119.4 90 65.6
Nitab4.5_0000050g0110 Nicotiana tabacum HOM05D005192 ORTHO05D006023 2.1e-25 119.4 91 63.7
Sp5g18870 Schrenkiella parvula HOM05D005192 ORTHO05D006023 2.1e-25 119.4 83 73.5
Lalb_Chr12g0210171 Lupinus albus HOM05D005192 ORTHO05D006023 2.8e-25 119.0 90 66.7
vmacro13581 Vaccinium macrocarpon HOM05D005192 ORTHO05D006023 3.6e-25 118.6 84 70.2
vmacro13584 Vaccinium macrocarpon HOM05D005192 ORTHO05D006023 4.7e-25 118.2 84 69.0
PGSC0003DMG400013231 Solanum tuberosum HOM05D005192 ORTHO05D006023 6.2e-25 117.9 91 61.5
Ah.05g177160 Amaranthus hybridus HOM05D005192 ORTHO05D006023 8.1e-25 117.5 85 71.8
Lj3g0015892 Lotus japonicus HOM05D005192 ORTHO05D006023 8.1e-25 117.5 90 66.7
arahy.Tifrunner.gnm1.ann1.8Z97YG Arachis hypogaea HOM05D005192 ORTHO05D006023 1.1e-24 117.1 85 69.4
MD02G1236200 Malus domestica HOM05D005192 ORTHO05D006023 1.1e-24 117.1 84 72.6
arahy.Tifrunner.gnm1.ann1.SX2T07 Arachis hypogaea HOM05D005192 ORTHO05D006023 1.4e-24 116.7 85 69.4
FAN06G2558 Fragaria x ananassa HOM05D005192 ORTHO05D006023 1.4e-24 116.7 89 68.5
SalBow5G0434 Salvia bowleyana HOM05D003398 ORTHO05D003867 1.4e-24 116.7 92 59.8
ECA234G1488 Erigeron canadensis HOM05D005192 ORTHO05D006023 1.8e-24 116.3 86 62.8
PSO063G5995 Papaver somniferum HOM05D005192 ORTHO05D006023 1.8e-24 116.3 82 68.3
VMungo0331G1938 Vigna mungo HOM05D005192 ORTHO05D006023 1.8e-24 116.3 89 68.5
FAN10G1987 Fragaria x ananassa HOM05D005192 ORTHO05D006023 2.3e-24 115.9 86 69.8
DCAR_029189 Daucus carota HOM05D005192 ORTHO05D006023 3.1e-24 115.5 88 64.8
FAN03G1308 Fragaria x ananassa HOM05D005192 ORTHO05D006023 3.1e-24 115.5 89 67.4
Aqoxy3G01990 Aquilegia oxysepala HOM05D005192 ORTHO05D006023 4.0e-24 115.2 85 67.1
FvH4_7g07320 Fragaria vesca HOM05D005192 ORTHO05D006023 4.0e-24 115.2 89 67.4
MD02G1236300 Malus domestica HOM05D005192 ORTHO05D006023 4.0e-24 115.2 89 68.5
Rhsim07G0045800 Rhododendron simsii HOM05D005192 ORTHO05D006023 4.0e-24 115.2 84 70.2
Solyc10g061870.1 Solanum lycopersicum HOM05D005192 ORTHO05D006023 4.0e-24 115.2 91 59.3
Oeu041522.2 Olea europaea HOM05D005192 ORTHO05D006023 5.2e-24 114.8 90 60.0
RcHm_v2.0_Chr1g0340081 Rosa chinensis HOM05D005192 ORTHO05D006023 5.2e-24 114.8 89 64.0
CiPaw.01G069000 Carya illinoinensis HOM05D005192 ORTHO05D006023 6.8e-24 114.4 87 69.0
Glyma.07G123500 Glycine max HOM05D005192 ORTHO05D006023 6.8e-24 114.4 89 66.3
Peaxi162Scf00245g00322 Petunia axillaris HOM05D005192 ORTHO05D006023 6.8e-24 114.4 88 62.5
Migut.B01443 Erythranthe guttata HOM05D005192 ORTHO05D006023 8.9e-24 114.0 90 61.1
FAN01G2901 Fragaria x ananassa HOM05D005192 ORTHO05D006023 1.2e-23 113.6 89 66.3
Glyma.03G098300 Glycine max HOM05D005192 ORTHO05D006023 1.5e-23 113.2 89 65.2
Dinv43532 Davidia involucrata HOM05D005192 ORTHO05D006023 2.0e-23 112.8 86 66.3
Lj9C612T3 Lonicera japonica HOM05D005192 ORTHO05D006023 2.0e-23 112.8 84 61.9
TAR629G1606 Trochodendron aralioides HOM05D005192 ORTHO05D006023 2.6e-23 112.5 89 67.4
HanXRQChr11g0330951 Helianthus annuus HOM05D005192 ORTHO05D006023 4.4e-23 111.7 86 61.6
Lsat_1_v5_gn_4_42301 Lactuca sativa HOM05D005192 ORTHO05D006023 7.5e-23 110.9 86 57.0
DCAR_015753 Daucus carota HOM05D005192 ORTHO05D006023 1.7e-22 109.8 86 62.8
MSTRG.17088 Avicennia marina HOM05D005192 ORTHO05D006023 2.2e-22 109.4 85 64.7
Nn3g21169 Nelumbo nucifera HOM05D005192 ORTHO05D006023 2.9e-22 109.0 85 65.9
ATR0829G090 Amborella trichopoda HOM05D005192 ORTHO05D006023 6.4e-22 107.8 91 59.3
unitig_61.g26432 Utricularia gibba HOM05D005192 ORTHO05D006023 8.3e-22 107.5 90 60.0
Oeu060687.1 Olea europaea HOM05D005192 ORTHO05D006023 1.9e-21 106.3 85 58.8
Peaxi162Scf00250g00049 Petunia axillaris HOM05D005192 ORTHO05D006023 4.1e-21 105.1 91 57.1
Os04g0601400 Oryza sativa ssp. japonica HOM05D005192 ORTHO05D006023 7.1e-21 104.4 88 58.0
Zm00001eb071820 Zea mays HOM05D005192 ORTHO05D006023 7.1e-21 104.4 88 56.8
Nn3g21165 Nelumbo nucifera HOM05D005192 ORTHO05D006023 2.1e-20 102.8 84 63.1
HPP92_014406 Vanilla planifolia HOM05D005192 ORTHO05D006023 4.6e-20 101.7 91 50.5
CsaV3_3G010010 Cucumis sativus L. HOM05D005192 ORTHO05D006023 1.3e-19 100.1 89 56.2
TAR629G2600 Trochodendron aralioides HOM05D005192 ORTHO05D006023 2.3e-19 99.4 82 63.4
ClCG05G002570 Citrullus lanatus HOM05D005192 ORTHO05D006023 3.9e-19 98.6 88 58.0
Sed0020247 Sechium edule HOM05D005192 ORTHO05D006023 1.1e-18 97.1 88 56.8
Phvul.010G038700 Phaseolus vulgaris HOM05D005192 ORTHO05D006023 4.3e-18 95.1 92 53.3
arahy.Tifrunner.gnm1.ann1.9NJ9Q0 Arachis hypogaea HOM05D005192 ORTHO05D006023 5.6e-18 94.7 85 55.3
Sed0012289 Sechium edule HOM05D005192 ORTHO05D006023 5.6e-18 94.7 88 58.0
unitig_0.g1357 Utricularia gibba HOM05D005192 ORTHO05D006023 2.8e-17 92.4 68 64.7
MELO3C006223.2 Cucumis melo HOM05D005192 ORTHO05D006023 4.7e-17 91.7 85 55.3
CDE04G3605 Ceratophyllum demersum HOM05D005192 ORTHO05D006023 4.4e-15 85.1 86 48.8
MELO3C006222.2 Cucumis melo HOM05D005192 ORTHO05D006023 2.2e-14 82.8 91 49.5
CsaV3_3G010000 Cucumis sativus L. HOM05D005192 ORTHO05D006023 2.9e-14 82.4 91 50.5
ClCG05G002560 Citrullus lanatus HOM05D005192 ORTHO05D006023 1.9e-13 79.7 89 52.8
Glyma.03G098400 Glycine max HOM05D005192 ORTHO05D006023 3.2e-13 79.0 82 52.4
Mapoly0125s0044 Marchantia polymorpha HOM05D005192 ORTHO05D006023 4.6e-12 75.1 86 43.0
SMO137G0328 Selaginella moellendorffii HOM05D005192 ORTHO05D006023 2.5e-10 69.3 81 39.5
AagrBONN_evm.TU.Sc2ySwM_117.2458 Anthoceros agrestis HOM05D005192 ORTHO05D006023 7.3e-10 67.8 80 43.8
SEGI_22185 Sequoiadendron giganteum HOM05D005192 ORTHO05D006023 7.6e-07 57.8 83 36.1
SEGI_22584 Sequoiadendron giganteum HOM05D005192 ORTHO05D006023 7.6e-07 57.8 83 36.1
SEGI_29719 Sequoiadendron giganteum HOM05D005192 ORTHO05D006023 7.6e-07 57.8 83 36.1


User provided reference genes

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