Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p052404 Quercus lobata HOM05D007033 ORTHO05D008770 1.1e-64 250.0 143 100.0
PGR042G3214 Punica granatum HOM05D007033 ORTHO05D008770 8.9e-38 160.6 92 81.5
ClCG05G002970 Citrullus lanatus HOM05D007033 ORTHO05D008770 2.6e-37 159.1 87 78.2
Prupe.2G100000 Prunus persica HOM05D007033 ORTHO05D008770 2.6e-37 159.1 88 79.5
Haze_15805 Corylus avellana HOM05D007033 ORTHO05D008770 5.7e-37 157.9 87 79.3
MELO3C006276.2 Cucumis melo HOM05D007033 ORTHO05D008770 5.7e-37 157.9 87 77.0
CsaV3_3G010550 Cucumis sativus L. HOM05D007033 ORTHO05D008770 5.7e-37 157.9 87 77.0
RcHm_v2.0_Chr1g0337311 Rosa chinensis HOM05D007033 ORTHO05D008770 2.8e-36 155.6 87 78.2
FvH4_7g07210 Fragaria vesca HOM05D007033 ORTHO05D008770 3.7e-36 155.2 87 78.2
MD02G1238400 Malus domestica HOM05D007033 ORTHO05D008770 6.3e-36 154.5 88 76.1
FAN03G2679 Fragaria x ananassa HOM05D007033 ORTHO05D008770 1.1e-35 153.7 87 77.0
FAN06G3925 Fragaria x ananassa HOM05D007033 ORTHO05D008770 1.1e-35 153.7 87 77.0
MD07G1078200 Malus domestica HOM05D007033 ORTHO05D008770 1.4e-35 153.3 79 81.0
Sed0003013 Sechium edule HOM05D007033 ORTHO05D008770 1.4e-35 153.3 86 75.6
GSVIVG01011318001 Vitis vinifera HOM05D007033 ORTHO05D008770 1.8e-35 152.9 97 71.1
Eucgr.E01772 Eucalyptus grandis HOM05D007033 ORTHO05D008770 5.4e-35 151.4 88 75.0
BcaC03g13530 Brassica carinata HOM05D007033 ORTHO05D008770 7.0e-35 151.0 91 75.8
BolC2t06829H Brassica oleracea HOM05D007033 ORTHO05D008770 7.0e-35 151.0 91 75.8
Sp6g26610 Schrenkiella parvula HOM05D007033 ORTHO05D008770 7.0e-35 151.0 91 78.0
C02p09210 Brassica napus HOM05D007033 ORTHO05D008770 9.2e-35 150.6 91 74.7
CANSAT35G1406 Cannabis sativa HOM05D007033 ORTHO05D008770 1.2e-34 150.2 87 72.4
Hma1.2p1_0353F.1_g133340 Hydrangea macrophylla HOM05D007033 ORTHO05D008770 1.2e-34 150.2 86 75.6
A02p04360 Brassica napus HOM05D007033 ORTHO05D008770 1.6e-34 149.8 91 74.7
BraA02t05400Z Brassica rapa HOM05D007033 ORTHO05D008770 1.6e-34 149.8 91 74.7
Dinv43975 Davidia involucrata HOM05D007033 ORTHO05D008770 1.6e-34 149.8 79 79.7
Carub.0006s1585 Capsella rubella HOM05D007033 ORTHO05D008770 2.0e-34 149.4 98 72.4
Nn3g19225 Nelumbo nucifera HOM05D007033 ORTHO05D008770 2.0e-34 149.4 82 78.0
Sc23g0004770 Simmondsia chinensis HOM05D007033 ORTHO05D008770 2.0e-34 149.4 90 76.7
AL6G28700 Arabidopsis lyrata HOM05D007033 ORTHO05D008770 2.7e-34 149.1 80 80.0
Hund17162 Selenicereus undatus HOM05D007033 ORTHO05D008770 2.7e-34 149.1 85 74.1
Ciclev10033075m.g Citrus clementina HOM05D007033 ORTHO05D008770 3.5e-34 148.7 87 75.9
arahy.Tifrunner.gnm1.ann1.14YBGE Arachis hypogaea HOM05D007033 ORTHO05D008770 4.5e-34 148.3 88 73.9
arahy.Tifrunner.gnm1.ann1.GIK8C1 Arachis hypogaea HOM05D007033 ORTHO05D008770 4.5e-34 148.3 88 73.9
AT5G17610 Arabidopsis thaliana HOM05D007033 ORTHO05D008770 7.8e-34 147.5 80 78.8
Thecc.05G231700 Theobroma cacao HOM05D007033 ORTHO05D008770 7.8e-34 147.5 92 73.9
TWI60G0127 Tripterygium wilfordii HOM05D007033 ORTHO05D008770 7.8e-34 147.5 88 76.1
Cc02_g26390 Coffea canephora HOM05D007033 ORTHO05D008770 1.7e-33 146.4 98 67.3
THA.LOC104827245 Tarenaya hassleriana HOM05D007033 ORTHO05D008770 1.7e-33 146.4 99 70.7
COL.COLO4_08541 Corchorus olitorius HOM05D007033 ORTHO05D008770 2.3e-33 146.0 100 69.0
SalBow5G2417 Salvia bowleyana HOM05D007033 ORTHO05D008770 2.3e-33 146.0 87 74.7
Solyc01g081200.3 Solanum lycopersicum HOM05D007033 ORTHO05D008770 2.3e-33 146.0 89 73.0
Aqoxy5G03237 Aquilegia oxysepala HOM05D007033 ORTHO05D008770 2.9e-33 145.6 82 74.4
EL10Ac1g00673 Beta vulgaris HOM05D007033 ORTHO05D008770 3.8e-33 145.2 88 71.6
CAN.G700.33 Capsicum annuum HOM05D007033 ORTHO05D008770 5.0e-33 144.8 88 75.0
Sopen01g032780 Solanum pennellii HOM05D007033 ORTHO05D008770 6.6e-33 144.4 87 74.7
Thhalv10014961m.g Eutrema salsugineum HOM05D007033 ORTHO05D008770 8.6e-33 144.1 79 75.9
PSO063G1631 Papaver somniferum HOM05D007033 ORTHO05D008770 8.6e-33 144.1 87 71.3
PSO782G0028 Papaver somniferum HOM05D007033 ORTHO05D008770 8.6e-33 144.1 87 71.3
Sabra13G0063200 Salix brachista HOM05D007033 ORTHO05D008770 8.6e-33 144.1 88 72.7
PGSC0003DMG400001787 Solanum tuberosum HOM05D007033 ORTHO05D008770 1.1e-32 143.7 87 74.7
Actinidia21596 Actinidia chinensis HOM05D007033 ORTHO05D008770 1.9e-32 142.9 86 69.8
BcaC04g18775 Brassica carinata HOM05D007033 ORTHO05D008770 1.9e-32 142.9 82 75.6
C09p59560 Brassica napus HOM05D007033 ORTHO05D008770 1.9e-32 142.9 82 75.6
BolC9t58794H Brassica oleracea HOM05D007033 ORTHO05D008770 1.9e-32 142.9 82 75.6
CiPaw.02G048600 Carya illinoinensis HOM05D007033 ORTHO05D008770 1.9e-32 142.9 87 73.6
SGA_v2.0_scaffold98G29399 Striga asiatica HOM05D007033 ORTHO05D008770 1.9e-32 142.9 89 71.9
CARHR195570 Cardamine hirsuta HOM05D007033 ORTHO05D008770 2.5e-32 142.5 79 75.9
Glyma.07G123600 Glycine max HOM05D007033 ORTHO05D008770 3.3e-32 142.1 83 71.1
Lj3g0004375 Lotus japonicus HOM05D007033 ORTHO05D008770 3.3e-32 142.1 83 73.5
Peaxi162Scf00592g00448 Petunia axillaris HOM05D007033 ORTHO05D008770 3.3e-32 142.1 87 72.4
VMungo0331G1478 Vigna mungo HOM05D007033 ORTHO05D008770 3.3e-32 142.1 91 70.3
Rhsim12G0078100 Rhododendron simsii HOM05D007033 ORTHO05D008770 4.3e-32 141.7 88 69.3
Glyma.03G098200 Glycine max HOM05D007033 ORTHO05D008770 5.6e-32 141.4 91 67.0
Sed0002871 Sechium edule HOM05D007033 ORTHO05D008770 5.6e-32 141.4 87 67.8
Nitab4.5_0004800g0080 Nicotiana tabacum HOM05D007033 ORTHO05D008770 7.3e-32 141.0 88 73.9
Phvul.010G038500 Phaseolus vulgaris HOM05D007033 ORTHO05D008770 9.5e-32 140.6 91 68.1
Potri.013G073100 Populus trichocarpa HOM05D007033 ORTHO05D008770 9.5e-32 140.6 88 70.5
Gohir.D13G100400 Gossypium hirsutum HOM05D007033 ORTHO05D008770 1.6e-31 139.8 92 69.6
Gorai.013G112100 Gossypium raimondii HOM05D007033 ORTHO05D008770 1.6e-31 139.8 92 69.6
Manes.08G157600 Manihot esculenta HOM05D007033 ORTHO05D008770 2.1e-31 139.4 88 71.6
Gohir.A13G085300 Gossypium hirsutum HOM05D007033 ORTHO05D008770 2.8e-31 139.0 92 69.6
Ah.05g177250 Amaranthus hybridus HOM05D007033 ORTHO05D008770 3.6e-31 138.7 81 77.8
Lalb_Chr12g0210181 Lupinus albus HOM05D007033 ORTHO05D008770 3.6e-31 138.7 84 71.4
Cfa003682 Carpinus fangiana HOM05D007033 ORTHO05D008770 4.7e-31 138.3 105 62.9
HPP92_003404 Vanilla planifolia HOM05D007033 ORTHO05D008770 4.7e-31 138.3 90 68.9
HPP92_003427 Vanilla planifolia HOM05D007033 ORTHO05D008770 4.7e-31 138.3 90 68.9
Psat4g215800 Pisum sativum HOM05D007033 ORTHO05D008770 6.1e-31 137.9 98 63.3
Lsat_1_v5_gn_4_42281 Lactuca sativa HOM05D007033 ORTHO05D008770 8.0e-31 137.5 88 69.3
Nitab4.5_0004594g0020 Nicotiana tabacum HOM05D007033 ORTHO05D008770 8.0e-31 137.5 88 71.6
vmacro21112 Vaccinium macrocarpon HOM05D007033 ORTHO05D008770 1.0e-30 137.1 71 78.9
Migut.B01441 Erythranthe guttata HOM05D007033 ORTHO05D008770 1.4e-30 136.7 87 71.3
Sc23g0004660 Simmondsia chinensis HOM05D007033 ORTHO05D008770 1.8e-30 136.3 111 62.2
MBI16_g43713_MAGBIO Magnolia biondii HOM05D007033 ORTHO05D008770 4.0e-30 135.2 77 74.0
Zm00001eb009070 Zea mays HOM05D007033 ORTHO05D008770 4.0e-30 135.2 87 65.5
MBI16_g43476_MAGBIO Magnolia biondii HOM05D007033 ORTHO05D008770 5.2e-30 134.8 96 65.6
ECA234G3633 Erigeron canadensis HOM05D007033 ORTHO05D008770 8.9e-30 134.0 88 70.5
CDE12G0505 Ceratophyllum demersum HOM05D007033 ORTHO05D008770 1.5e-29 133.3 86 65.1
unitig_8.g3853 Utricularia gibba HOM05D007033 ORTHO05D008770 4.4e-29 131.7 78 71.8
TPR.G17361 Trifolium pratense HOM05D007033 ORTHO05D008770 5.8e-29 131.3 79 69.6
BraA10t44240Z Brassica rapa HOM05D007033 ORTHO05D008770 9.8e-29 130.6 87 71.3
HanXRQChr03g0088201 Helianthus annuus HOM05D007033 ORTHO05D008770 9.8e-29 130.6 88 64.8
AUR62014520 Chenopodium quinoa HOM05D007033 ORTHO05D008770 1.3e-28 130.2 85 69.4
AUR62038014 Chenopodium quinoa HOM05D007033 ORTHO05D008770 1.1e-27 127.1 85 68.2
ATR0829G185 Amborella trichopoda HOM05D007033 ORTHO05D008770 3.5e-26 122.1 71 67.6
SEGI_14041 Sequoiadendron giganteum HOM05D007033 ORTHO05D008770 7.3e-24 114.4 77 64.9
HPP92_025932 Vanilla planifolia HOM05D007033 ORTHO05D008770 8.0e-23 110.9 73 63.0
AagrBONN_evm.TU.Sc2ySwM_368.1536 Anthoceros agrestis HOM05D007033 ORTHO05D008770 7.5e-21 104.4 74 54.1
A10p21800 Brassica napus HOM05D007033 ORTHO05D008770 9.8e-21 104.0 72 62.5
SMO351G0381 Selaginella moellendorffii HOM05D007033 ORTHO05D008770 9.8e-21 104.0 85 50.6
Pp3c19_9960 Physcomitrium patens HOM05D007033 ORTHO05D008770 1.7e-20 103.2 72 61.1
TAR629G3499 Trochodendron aralioides HOM05D007033 ORTHO05D008770 2.9e-20 102.4 53 75.5
Mapoly0058s0110 Marchantia polymorpha HOM05D007033 ORTHO05D008770 3.7e-20 102.1 88 51.1
Pp3c7_5640 Physcomitrium patens HOM05D007033 ORTHO05D008770 4.9e-20 101.7 66 60.6
Pp3c18_1710 Physcomitrium patens HOM05D007033 ORTHO05D008770 8.3e-20 100.9 76 55.3
Atru.chr2.1689 Acer truncatum HOM05D007033 ORTHO05D008770 6.2e-15 84.7 46 76.1
Sopen05g015510 Solanum pennellii HOM05D007033 ORTHO05D008770 7.5e-13 77.8 40 80.0
MCO10G230 Micromonas commoda HOM05D007033 ORTHO05D008770 1.2e-10 70.5 93 36.6
CBR_g44313 Chara braunii HOM05D007033 ORTHO05D008770 7.8e-10 67.8 67 43.3
CBR_g49607 Chara braunii HOM05D007033 ORTHO05D008770 3.9e-09 65.5 63 44.4
PRCOL_00006026 Prasinoderma coloniale HOM05D007033 ORTHO05D008770 2.5e-08 62.8 75 37.3


User provided reference genes

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