Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p052194 Quercus lobata HOM05D007511 ORTHO05D003753 1.0e-75 286.6 135 100.0
CiPaw.02G046500 Carya illinoinensis HOM05D007511 ORTHO05D003753 4.3e-18 95.1 132 45.5
Ciclev10033674m.g Citrus clementina HOM05D007511 ORTHO05D003753 5.5e-13 78.2 142 37.3
TWI60G1247 Tripterygium wilfordii HOM05D007511 ORTHO05D003753 5.5e-13 78.2 133 37.6
MD07G1077000 Malus domestica HOM05D007511 ORTHO05D003753 7.9e-12 74.3 139 38.1
FAN03G1709 Fragaria x ananassa HOM05D007511 ORTHO05D003753 1.3e-11 73.6 146 35.6
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 2.3e-11 72.8 147 35.4
TWI34G0987 Tripterygium wilfordii HOM05D007511 ORTHO05D003753 3.9e-11 72.0 133 36.1
Ca_23172_v3 Cicer arietinum L. HOM05D007511 ORTHO05D003753 5.1e-11 71.6 115 37.4
Lalb_Chr07g0194541 Lupinus albus HOM05D007511 ORTHO05D003753 5.1e-11 71.6 84 46.4
MD02G1239600 Malus domestica HOM05D007511 ORTHO05D003753 5.1e-11 71.6 142 38.0
RcHm_v2.0_Chr1g0337051 Rosa chinensis HOM05D007511 ORTHO05D003753 8.7e-11 70.9 148 35.1
FAN01G1810 Fragaria x ananassa HOM05D007511 ORTHO05D003753 1.1e-10 70.5 146 33.6
FvH4_7g07110 Fragaria vesca HOM05D007511 ORTHO05D003753 1.5e-10 70.1 148 33.8
FAN06G3938 Fragaria x ananassa HOM05D007511 ORTHO05D003753 1.5e-10 70.1 148 33.8
TAR381G0240 Trochodendron aralioides HOM05D001418 ORTHO05D004504 2.5e-10 69.3 146 35.6
TPR.G24583 Trifolium pratense HOM05D007511 ORTHO05D003753 3.3e-10 68.9 94 41.5
Prupe.2G098000 Prunus persica HOM05D007511 ORTHO05D003753 9.6e-10 67.4 138 36.2
Psat4g207240 Pisum sativum HOM05D007511 ORTHO05D003753 1.3e-09 67.0 95 36.8
Potri.019G043701 Populus trichocarpa HOM05D007511 ORTHO05D003753 1.4e-08 63.5 136 35.3
Medtr8g011160 Medicago truncatula HOM05D007511 ORTHO05D003753 2.4e-08 62.8 89 43.8
Lj3g0008746 Lotus japonicus HOM05D007511 ORTHO05D003753 5.3e-08 61.6 133 34.6
TAR629G3237 Trochodendron aralioides HOM05D007511 ORTHO05D003753 1.2e-07 60.5 96 41.7
Rhsim01G0134700 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.5e-07 60.1 130 36.2
Thecc.05G230200 Theobroma cacao HOM05D007511 ORTHO05D003753 1.5e-07 60.1 149 30.9
Rhsim01G0134200 Rhododendron simsii HOM05D007511 ORTHO05D003753 2.6e-07 59.3 130 35.4
Sabra19G0054300 Salix brachista HOM05D007511 ORTHO05D003753 3.4e-07 58.9 97 39.2
Glyma.16G082300 Glycine max HOM05D007511 ORTHO05D003753 4.5e-07 58.5 103 35.0
Medtr8g010740 Medicago truncatula HOM05D007511 ORTHO05D003753 4.5e-07 58.5 86 43.0
Carub.0006s1583 Capsella rubella HOM05D007511 ORTHO05D003753 5.8e-07 58.2 89 42.7
Duzib128G1432 Durio zibethinus HOM05D007511 ORTHO05D003753 7.6e-07 57.8 149 28.9
Sed0019168 Sechium edule HOM05D007511 ORTHO05D003753 7.6e-07 57.8 129 31.8
Manes.08G158000 Manihot esculenta HOM05D007511 ORTHO05D003753 1.3e-06 57.0 91 37.4
Duzib177G0499 Durio zibethinus HOM05D007511 ORTHO05D003753 2.9e-06 55.8 151 33.8
AT5G17590 Arabidopsis thaliana HOM05D007511 ORTHO05D003753 3.8e-06 55.5 90 40.0
CsaV3_2G011030 Cucumis sativus L. HOM05D007511 ORTHO05D003753 3.8e-06 55.5 135 27.4
Aa31LG11G12060 Aethionema arabicum HOM05D007511 ORTHO05D003753 6.5e-06 54.7 109 37.6
BcaB08g36759 Brassica carinata HOM05D007511 ORTHO05D003753 6.5e-06 54.7 126 31.7
A10p21820 Brassica napus HOM05D007511 ORTHO05D003753 6.5e-06 54.7 144 29.9
BraA10t44242Z Brassica rapa HOM05D007511 ORTHO05D003753 6.5e-06 54.7 144 29.9
Sp6g26630 Schrenkiella parvula HOM05D007511 ORTHO05D003753 6.5e-06 54.7 128 29.7


User provided reference genes

Program Settings