Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p049587 Quercus lobata HOM05D000069 ORTHO05D011441 1.8e-69 265.8 134 100.0
QL05p047453 Quercus lobata HOM05D000069 ORTHO05D008115 2.3e-43 179.1 130 76.2
Haze_06219 Corylus avellana HOM05D000069 ORTHO05D008115 2.5e-34 149.1 131 61.8
Cfa000616 Carpinus fangiana HOM05D000069 ORTHO05D008115 7.3e-34 147.5 131 61.1
CiPaw.09G070300 Carya illinoinensis HOM05D000069 ORTHO05D008115 1.4e-32 143.3 132 56.1
CiPaw.10G059600 Carya illinoinensis HOM05D000069 ORTHO05D008115 4.7e-25 118.2 131 52.7
Dinv16780 Davidia involucrata HOM05D000069 ORTHO05D008115 1.1e-24 117.1 122 52.5
Thecc.06G169700 Theobroma cacao HOM05D000069 ORTHO05D008115 2.3e-24 115.9 125 52.8
Duzib192G0734 Durio zibethinus HOM05D000069 ORTHO05D008115 3.1e-24 115.5 125 52.8
Gohir.D06G137300 Gossypium hirsutum HOM05D000069 ORTHO05D008115 4.0e-24 115.2 123 55.3
Gorai.010G159600 Gossypium raimondii HOM05D000069 ORTHO05D008115 4.0e-24 115.2 123 55.3
Duzib235G1021 Durio zibethinus HOM05D000069 ORTHO05D008115 3.4e-23 112.1 125 52.0
Gohir.A06G131300 Gossypium hirsutum HOM05D000069 ORTHO05D008115 3.4e-23 112.1 123 54.5
CSS0004289 Camellia sinensis var. sinensis HOM05D000069 ORTHO05D008115 7.5e-23 110.9 122 50.8
CSS0040648 Camellia sinensis var. sinensis HOM05D000069 ORTHO05D008115 7.5e-23 110.9 122 50.8
Hma1.2p1_0333F.1_g128100 Hydrangea macrophylla HOM05D000069 ORTHO05D008115 7.5e-23 110.9 123 53.7
COL.COLO4_31283 Corchorus olitorius HOM05D000069 ORTHO05D008115 9.8e-23 110.5 120 53.3
Dinv40688 Davidia involucrata HOM05D000069 ORTHO05D008115 3.7e-22 108.6 120 52.5
Glyma.13G229100 Glycine max HOM05D000069 ORTHO05D008115 3.7e-22 108.6 143 47.6
Phvul.006G175500 Phaseolus vulgaris HOM05D000069 ORTHO05D008115 8.3e-22 107.5 141 45.4
FAN25G2832 Fragaria x ananassa HOM05D000069 ORTHO05D008115 1.1e-21 107.1 88 59.1
Glyma.15G083400 Glycine max HOM05D000069 ORTHO05D008115 1.9e-21 106.3 141 45.4
MD05G1300100 Malus domestica HOM05D000069 ORTHO05D008115 1.9e-21 106.3 149 43.6
Manes.16G040500 Manihot esculenta HOM05D000069 ORTHO05D008115 1.9e-21 106.3 128 47.7
FAN16G3137 Fragaria x ananassa HOM05D000069 ORTHO05D008115 4.1e-21 105.1 88 58.0
FAN21G2295 Fragaria x ananassa HOM05D000069 ORTHO05D008115 4.1e-21 105.1 88 58.0
Medtr2g016180 Medicago truncatula HOM05D000069 ORTHO05D008115 7.1e-21 104.4 143 46.2
FvH4_3g07700 Fragaria vesca HOM05D000069 ORTHO05D008115 9.2e-21 104.0 88 56.8
TWI38G2185 Tripterygium wilfordii HOM05D000069 ORTHO05D008115 1.6e-20 103.2 123 48.0
arahy.Tifrunner.gnm1.ann1.TUI46K Arachis hypogaea HOM05D000069 ORTHO05D008115 2.1e-20 102.8 133 47.4
Lj6g0026900 Lotus japonicus HOM05D000069 ORTHO05D008115 2.1e-20 102.8 126 45.2
arahy.Tifrunner.gnm1.ann1.EM5GCM Arachis hypogaea HOM05D000069 ORTHO05D008115 2.7e-20 102.4 133 47.4
FAN11G2491 Fragaria x ananassa HOM05D000069 ORTHO05D008115 4.6e-20 101.7 88 56.8
Prupe.4G062200 Prunus persica HOM05D000069 ORTHO05D008115 4.6e-20 101.7 136 45.6
VMungo0540G0295 Vigna mungo HOM05D000069 ORTHO05D008115 4.6e-20 101.7 134 45.5
Rhsim02G0143300 Rhododendron simsii HOM05D000069 ORTHO05D008115 1.0e-19 100.5 141 41.1
Sabra04G0037400 Salix brachista HOM05D000069 ORTHO05D008115 1.0e-19 100.5 113 47.8
Potri.004G057700 Populus trichocarpa HOM05D000069 ORTHO05D008115 1.7e-19 99.8 119 49.6
Psat1g197840 Pisum sativum HOM05D000069 ORTHO05D008115 8.6e-19 97.4 137 43.8
RcHm_v2.0_Chr5g0010931 Rosa chinensis HOM05D000069 ORTHO05D008115 1.1e-18 97.1 88 52.3
Nn1g09181 Nelumbo nucifera HOM05D000069 ORTHO05D008115 1.5e-18 96.7 122 44.3
CSS0049514 Camellia sinensis var. sinensis HOM05D000069 ORTHO05D008115 1.9e-18 96.3 143 44.1
TAR629G1136 Trochodendron aralioides HOM05D000069 ORTHO05D008115 4.3e-18 95.1 127 42.5
Ciclev10015066m.g Citrus clementina HOM05D000069 ORTHO05D008115 7.3e-18 94.4 114 47.4
Medtr2g016270 Medicago truncatula HOM05D000069 ORTHO05D008115 7.3e-18 94.4 119 47.9
CSS0033729 Camellia sinensis var. sinensis HOM05D000069 ORTHO05D008115 9.5e-18 94.0 143 43.4
Potri.011G066800 Populus trichocarpa HOM05D000069 ORTHO05D008115 1.2e-17 93.6 127 44.1
Actinidia39511 Actinidia chinensis HOM05D000069 ORTHO05D008115 4.7e-17 91.7 125 43.2
Eucgr.D00484 Eucalyptus grandis HOM05D000069 ORTHO05D008115 4.7e-17 91.7 130 45.4
Sabra11G0048400 Salix brachista HOM05D000069 ORTHO05D008115 4.7e-17 91.7 125 43.2
Actinidia07643 Actinidia chinensis HOM05D000069 ORTHO05D008115 2.3e-16 89.4 125 43.2
MBI06_g08603_MAGBIO Magnolia biondii HOM05D000069 ORTHO05D008115 2.3e-16 89.4 132 39.4
TPR.G11788 Trifolium pratense HOM05D000069 ORTHO05D008115 2.3e-16 89.4 134 44.0
Ca_00440_v3 Cicer arietinum L. HOM05D000069 ORTHO05D008115 8.9e-16 87.4 128 42.2
Cc02_g15080 Coffea canephora HOM05D000069 ORTHO05D008115 1.2e-15 87.0 111 45.0
Potri.011G066900 Populus trichocarpa HOM05D000069 ORTHO05D008115 1.2e-15 87.0 120 44.2
Cpa.g.sc7.76 Carica papaya HOM05D000069 ORTHO05D008115 1.5e-15 86.7 117 46.2
Eucgr.E02751 Eucalyptus grandis HOM05D000069 ORTHO05D008115 2.0e-15 86.3 120 45.0
Phvul.002G239300 Phaseolus vulgaris HOM05D000069 ORTHO05D008115 4.9e-14 81.6 122 41.8
PGR042G0928 Punica granatum HOM05D000069 ORTHO05D008115 4.9e-14 81.6 126 41.3
Sabra11G0048500 Salix brachista HOM05D000069 ORTHO05D008115 1.1e-13 80.5 126 40.5
TPR.G11777 Trifolium pratense HOM05D000069 ORTHO05D011441 3.2e-13 79.0 88 50.0
Medtr2g015920 Medicago truncatula HOM05D000069 ORTHO05D011441 5.4e-13 78.2 145 36.6
Lj1A1192G65 Lonicera japonica HOM05D000069 ORTHO05D008115 1.2e-12 77.0 128 42.2
Aqoxy4G00326 Aquilegia oxysepala HOM05D000069 ORTHO05D008115 1.6e-12 76.6 140 35.7
TPR.G11781 Trifolium pratense HOM05D000069 ORTHO05D011441 2.1e-12 76.3 92 47.8
Lalb_Chr12g0205091 Lupinus albus HOM05D000069 ORTHO05D008115 2.7e-12 75.9 113 43.4
Lalb_Chr12g0205101 Lupinus albus HOM05D000069 ORTHO05D008115 2.7e-12 75.9 113 43.4
Medtr2g015930 Medicago truncatula HOM05D000069 ORTHO05D011441 3.5e-12 75.5 89 47.2
Sc05g0007060 Simmondsia chinensis HOM05D000069 ORTHO05D008115 3.5e-12 75.5 101 40.6
Lj6g0022548 Lotus japonicus HOM05D000069 ORTHO05D011441 7.8e-12 74.3 94 46.8
CANSAT78G1393 Cannabis sativa HOM05D000069 ORTHO05D008115 1.0e-11 73.9 121 42.1
TPR.G11780 Trifolium pratense HOM05D000069 ORTHO05D011441 2.3e-11 72.8 87 47.1
Ca_00431_v3 Cicer arietinum L. HOM05D000069 ORTHO05D011441 3.9e-11 72.0 87 48.3
Medtr4g065077 Medicago truncatula HOM05D000069 ORTHO05D008115 5.1e-11 71.6 90 51.1
VMungo0251G1199 Vigna mungo HOM05D000069 ORTHO05D008115 6.6e-11 71.2 121 38.8
PSO782G1479 Papaver somniferum HOM05D000069 ORTHO05D008115 8.6e-11 70.9 133 36.8
Hund21150 Selenicereus undatus HOM05D000069 ORTHO05D008115 8.6e-11 70.9 90 41.1
Lj6g0004126 Lotus japonicus HOM05D000069 ORTHO05D011441 1.5e-10 70.1 127 37.8
Peaxi162Scf00940g00412 Petunia axillaris HOM05D000069 ORTHO05D008115 1.5e-10 70.1 141 34.8
Hund21172 Selenicereus undatus HOM05D000069 ORTHO05D008115 1.9e-10 69.7 90 40.0
PGSC0003DMG400010232 Solanum tuberosum HOM05D000069 ORTHO05D008115 3.3e-10 68.9 135 32.6
HanXRQChr05g0139861 Helianthus annuus HOM05D000069 ORTHO05D008115 9.6e-10 67.4 127 40.2
Nitab4.5_0000605g0120 Nicotiana tabacum HOM05D000069 ORTHO05D008115 2.8e-09 65.9 119 36.1
Solyc02g076690.3 Solanum lycopersicum HOM05D000069 ORTHO05D008115 3.6e-09 65.5 122 34.4
Lsat_1_v5_gn_7_24101 Lactuca sativa HOM05D000069 ORTHO05D008115 8.1e-09 64.3 145 33.1
Sopen02g021620 Solanum pennellii HOM05D000069 ORTHO05D008115 8.1e-09 64.3 122 34.4
PGSC0003DMG400010236 Solanum tuberosum HOM05D000069 ORTHO05D008115 8.1e-09 64.3 117 35.9
CAN.G370.84 Capsicum annuum HOM05D000069 ORTHO05D008115 1.1e-08 63.9 115 36.5
PSO063G1390 Papaver somniferum HOM05D000069 ORTHO05D008115 1.1e-08 63.9 96 39.6
Glyma.16G107200 Glycine max HOM05D000069 ORTHO05D011441 1.4e-08 63.5 132 37.1
Medtr8g086470 Medicago truncatula HOM05D000069 ORTHO05D008115 1.4e-08 63.5 103 43.7
AUR62031218 Chenopodium quinoa HOM05D000069 ORTHO05D008115 1.8e-08 63.2 107 36.4
Solyc02g076750.3 Solanum lycopersicum HOM05D000069 ORTHO05D008115 2.4e-08 62.8 117 35.0
Sopen02g021640 Solanum pennellii HOM05D000069 ORTHO05D008115 3.1e-08 62.4 115 34.8
EL10Ac8g20590 Beta vulgaris HOM05D000069 ORTHO05D008115 4.0e-08 62.0 111 36.9
Glyma.08G116900 Glycine max HOM05D000069 ORTHO05D008115 4.0e-08 62.0 126 34.1
Peaxi162Scf00261g00157 Petunia axillaris HOM05D000069 ORTHO05D008115 6.8e-08 61.2 117 35.0
Glyma.15G082200 Glycine max HOM05D000069 ORTHO05D011441 1.5e-07 60.1 118 36.4
Os01g0971400 Oryza sativa ssp. japonica HOM05D000069 ORTHO05D000060 1.5e-07 60.1 123 30.1
Psat1g198600 Pisum sativum HOM05D000069 ORTHO05D011441 1.5e-07 60.1 64 53.1
PGSC0003DMG400010234 Solanum tuberosum HOM05D000069 ORTHO05D008115 1.5e-07 60.1 112 33.9
Psat1g197680 Pisum sativum HOM05D000069 ORTHO05D011441 2.0e-07 59.7 62 51.6
CDE10G1200 Ceratophyllum demersum HOM05D000718 ORTHO05D003905 2.6e-07 59.3 121 28.1
Solyc02g076710.3 Solanum lycopersicum HOM05D000069 ORTHO05D008115 3.4e-07 58.9 112 33.9
Lalb_Chr19g0126071 Lupinus albus HOM05D000069 ORTHO05D011441 4.4e-07 58.5 117 36.8
Nn001s41356 Nelumbo nucifera HOM05D000069 ORTHO05D011441 4.4e-07 58.5 85 35.3
Nn8g39680 Nelumbo nucifera HOM05D000069 ORTHO05D011441 4.4e-07 58.5 85 35.3
Psat1g198400 Pisum sativum HOM05D000069 ORTHO05D011441 4.4e-07 58.5 73 47.9
arahy.Tifrunner.gnm1.ann1.BYFA8L Arachis hypogaea HOM05D000069 ORTHO05D011441 5.8e-07 58.2 61 50.8
C07p22760 Brassica napus HOM05D000069 ORTHO05D000060 5.8e-07 58.2 85 35.3
Nn1g04471 Nelumbo nucifera HOM05D000069 ORTHO05D008115 7.6e-07 57.8 88 39.8
Nitab4.5_0006324g0020 Nicotiana tabacum HOM05D000069 ORTHO05D008115 7.6e-07 57.8 119 33.6
Thhalv10025568m.g Eutrema salsugineum HOM05D000069 ORTHO05D000060 9.9e-07 57.4 82 35.4
Psat1g198520 Pisum sativum HOM05D000069 ORTHO05D011441 9.9e-07 57.4 99 39.4
arahy.Tifrunner.gnm1.ann1.JQCA0U Arachis hypogaea HOM05D000069 ORTHO05D011441 1.3e-06 57.0 79 44.3
AL7G15810 Arabidopsis lyrata HOM05D000069 ORTHO05D000060 2.2e-06 56.2 86 37.2
TPR.G6784 Trifolium pratense HOM05D000069 ORTHO05D008115 2.2e-06 56.2 123 35.0
BcaC06g34839 Brassica carinata HOM05D000069 ORTHO05D000060 2.9e-06 55.8 85 34.1
BolC7t42813H Brassica oleracea HOM05D000069 ORTHO05D000060 2.9e-06 55.8 85 34.1
Psat1g198760 Pisum sativum HOM05D000069 ORTHO05D011441 3.8e-06 55.5 60 48.3
Psat1g198800 Pisum sativum HOM05D000069 ORTHO05D011441 3.8e-06 55.5 99 38.4
Aa31LG7G5020 Aethionema arabicum HOM05D000069 ORTHO05D000060 4.9e-06 55.1 101 36.6
CiPaw.05G094000 Carya illinoinensis HOM05D000069 ORTHO05D000060 4.9e-06 55.1 68 41.2
AUR62027691 Chenopodium quinoa HOM05D000069 ORTHO05D008115 4.9e-06 55.1 84 39.3
Nn1g04472 Nelumbo nucifera HOM05D000069 ORTHO05D008115 4.9e-06 55.1 89 34.8
Nn1g04473 Nelumbo nucifera HOM05D000069 ORTHO05D008115 4.9e-06 55.1 106 34.9
Psat1g198720 Pisum sativum HOM05D000069 ORTHO05D011441 4.9e-06 55.1 97 36.1
A07p15450 Brassica napus HOM05D000069 ORTHO05D000060 6.4e-06 54.7 83 33.7
BraA07t29284Z Brassica rapa HOM05D000069 ORTHO05D000060 6.4e-06 54.7 83 33.7
CAN.G1330.6 Capsicum annuum HOM05D000069 ORTHO05D000060 6.4e-06 54.7 87 37.9
HPP92_019670 Vanilla planifolia HOM05D000069 ORTHO05D000060 6.4e-06 54.7 79 39.2


User provided reference genes

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