Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 9.2e-198 693.3 347 100.0
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 7.9e-149 530.8 346 78.9
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 4.3e-139 498.4 351 71.8
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 9.7e-139 497.3 343 73.8
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 5.3e-137 491.5 344 73.0
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 2.0e-136 489.6 296 80.4
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 2.9e-135 485.7 315 77.5
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 8.5e-135 484.2 324 75.0
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 1.1e-134 483.8 292 79.8
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 1.4e-134 483.4 353 70.0
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 1.4e-134 483.4 349 71.3
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 2.5e-134 482.6 303 78.5
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 2.5e-134 482.6 343 71.4
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 2.5e-134 482.6 329 75.1
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 9.4e-134 480.7 325 73.2
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 1.6e-133 479.9 303 77.9
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 6.1e-133 478.0 345 71.0
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 7.9e-133 477.6 344 71.5
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 1.4e-132 476.9 351 70.7
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 2.3e-132 476.1 292 78.8
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 3.9e-132 475.3 361 69.8
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 3.9e-132 475.3 318 73.9
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 1.5e-131 473.4 292 78.1
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 3.3e-131 472.2 345 69.6
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 1.3e-130 470.3 348 69.3
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 1.7e-130 469.9 303 76.2
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 1.7e-130 469.9 303 77.6
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 2.2e-130 469.5 293 78.2
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 1.4e-129 466.8 289 76.8
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 1.8e-129 466.5 289 77.2
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 1.8e-129 466.5 345 69.3
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 2.4e-129 466.1 289 77.2
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 5.3e-129 464.9 290 78.6
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 2.2e-127 459.5 290 75.9
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 2.2e-127 459.5 353 69.4
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 2.9e-127 459.1 346 69.4
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 8.5e-127 457.6 289 77.2
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 5.5e-126 454.9 348 68.7
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 1.2e-125 453.8 289 76.8
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 1.6e-125 453.4 289 75.4
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 4.7e-125 451.8 314 71.7
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 1.4e-124 450.3 360 63.6
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 2.3e-124 449.5 354 66.7
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 5.2e-124 448.4 302 72.5
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 5.2e-124 448.4 301 74.8
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 2.6e-123 446.0 302 70.5
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 4.4e-123 445.3 304 74.0
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 4.4e-123 445.3 294 74.5
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 5.7e-123 444.9 291 75.6
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 7.4e-123 444.5 319 67.7
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 1.3e-122 443.7 362 65.5
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 4.8e-122 441.8 279 78.5
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 6.3e-122 441.4 324 70.1
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 6.3e-122 441.4 274 78.8
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 3.1e-121 439.1 302 71.2
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 4.1e-121 438.7 291 73.9
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 5.9e-120 434.9 292 71.6
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 7.7e-120 434.5 291 72.9
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 1.0e-119 434.1 304 72.0
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 1.7e-119 433.3 290 73.4
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 2.2e-119 433.0 282 73.4
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 2.2e-119 433.0 305 71.1
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 5.0e-119 431.8 306 69.0
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 8.5e-119 431.0 301 70.4
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 1.1e-118 430.6 294 69.7
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 1.9e-118 429.9 318 66.4
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 5.5e-118 428.3 302 68.9
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 7.2e-118 427.9 290 73.1
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 2.7e-117 426.0 298 70.1
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 2.7e-117 426.0 294 72.8
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 1.4e-116 423.7 303 68.6
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 2.0e-115 419.9 305 69.2
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 5.7e-115 418.3 296 70.9
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 9.7e-115 417.5 303 68.6
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 2.2e-114 416.4 272 73.2
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 8.3e-114 414.5 287 71.4
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 1.8e-113 413.3 326 63.5
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 1.6e-112 410.2 303 68.0
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 1.2e-109 400.6 303 67.7
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.1e-109 399.8 319 65.8
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 4.7e-109 398.7 332 63.0
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 8.8e-108 394.4 311 66.9
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 9.8e-107 391.0 274 70.8
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 6.6e-103 378.3 252 72.6
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 8.6e-103 377.9 272 68.8
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 1.1e-102 377.5 298 62.1
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.5e-102 376.3 353 59.8
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 1.2e-99 367.5 221 81.0
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 1.5e-99 367.1 308 60.1
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 5.7e-99 365.2 272 69.1
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 1.2e-96 357.5 288 60.1
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 3.1e-92 342.8 296 60.8
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 8.9e-92 341.3 266 60.5
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 2.8e-85 319.7 207 73.4
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 4.4e-83 312.4 289 60.6
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 1.2e-77 294.3 392 41.8
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 4.0e-76 289.3 309 56.6
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 2.8e-69 266.5 182 71.4
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 4.9e-66 255.8 158 79.7
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 1.3e-58 231.1 142 78.9
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 6.4e-58 228.8 146 75.3
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 4.2e-57 226.1 150 73.3
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.6e-48 197.6 289 43.9
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 2.7e-48 196.8 192 57.8
Hma1.2p1_0098F.1_g048200 Hydrangea macrophylla HOM05D006565 ORTHO05D008717 2.1e-45 187.2 107 83.2
FAN10G0629 Fragaria x ananassa HOM05D006565 ORTHO05D008717 8.4e-42 175.3 219 49.3
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 8.4e-42 175.3 107 73.8
FAN03G2487 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.1e-40 170.6 219 48.4
Lj3A922G55 Lonicera japonica HOM05D006565 ORTHO05D008717 1.2e-35 154.8 89 83.1
Cpa.g.sc33.128 Carica papaya HOM05D006565 ORTHO05D008717 3.8e-34 149.8 82 85.4
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 1.3e-29 134.8 104 63.5
CSS0040424 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 1.1e-20 105.1 66 68.2
RhsimUnG0214900 Rhododendron simsii HOM05D006565 ORTHO05D008717 1.4e-20 104.8 80 70.0
Aqoxy6G01578 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 4.1e-20 103.2 144 45.1
CSS0049814 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 9.1e-20 102.1 60 81.7
MBI15_g31580_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 1.1e-14 85.1 60 68.3
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.4e-14 83.2 56 71.4
Aqoxy6G01581 Aquilegia oxysepala HOM05D006565 ORTHO05D000596 1.5e-11 74.7 41 82.9
Psat7g239080 Pisum sativum HOM05D005767 ORTHO05D006785 1.0e-10 72.0 81 49.4
MBI17_g02193_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D011977 7.2e-09 65.9 44 72.7
MBI05_g33289_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 1.2e-08 65.1 46 69.6
MBI06_g14037_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 3.3e-06 57.0 42 64.3
COL.COLO4_26864 Corchorus olitorius HOM05D002341 ORTHO05D003165 7.5e-06 55.8 34 73.5


User provided reference genes

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