Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p048382 Quercus lobata HOM05D000003 ORTHO05D011840 2.2e-179 632.1 307 100.0
AUR62020937 Chenopodium quinoa HOM05D000003 ORTHO05D011948 2.9e-09 67.0 138 32.6
Lj2g0011350 Lotus japonicus HOM05D000003 ORTHO05D000004 2.9e-09 67.0 173 28.9
Atru.chr10.1301 Acer truncatum HOM05D000003 ORTHO05D000006 4.9e-09 66.2 64 43.8
Atru.chr6.1170 Acer truncatum HOM05D000003 ORTHO05D000022 6.4e-09 65.9 98 35.7
Atru.chr7.622 Acer truncatum HOM05D000003 ORTHO05D000004 6.4e-09 65.9 64 45.3
Atru.chr10.629 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-08 65.1 66 45.5
Atru.chr1.956 Acer truncatum HOM05D000003 ORTHO05D000006 2.4e-08 63.9 64 42.2
Atru.chr5.349 Acer truncatum HOM05D000003 ORTHO05D000006 2.4e-08 63.9 64 37.5
Atru.chr4.30 Acer truncatum HOM05D000003 ORTHO05D000004 3.2e-08 63.5 65 38.5
Atru.chr5.3511 Acer truncatum HOM05D000003 ORTHO05D000006 3.2e-08 63.5 64 37.5
Manes.09G048156 Manihot esculenta HOM05D000003 ORTHO05D014272 3.2e-08 63.5 63 36.5
Atru.chr10.81 Acer truncatum HOM05D000003 ORTHO05D000004 4.1e-08 63.2 66 42.4
Atru.chr13.1154 Acer truncatum HOM05D000003 ORTHO05D000004 4.1e-08 63.2 64 37.5
Cpa.g.sc263.17 Carica papaya HOM05D000003 ORTHO05D000006 4.1e-08 63.2 60 35.0
TWI38G0333 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 4.1e-08 63.2 66 42.4
Atru.chr2.1277 Acer truncatum HOM05D000003 ORTHO05D000006 7.0e-08 62.4 65 40.0
Atru.chr9.1445 Acer truncatum HOM05D000003 ORTHO05D000006 7.0e-08 62.4 64 35.9
Manes.08G081422 Manihot esculenta HOM05D000003 ORTHO05D000006 7.0e-08 62.4 63 34.9
Atru.chr1.776 Acer truncatum HOM05D000003 ORTHO05D000004 1.2e-07 61.6 64 40.6
Hund00928 Selenicereus undatus HOM05D025103 ORTHO05D011840 1.2e-07 61.6 66 37.9
Atru.chr1.2428 Acer truncatum HOM05D000003 ORTHO05D000004 2.0e-07 60.8 64 42.2
Atru.chr10.857 Acer truncatum HOM05D000003 ORTHO05D000004 3.5e-07 60.1 64 40.6
Atru.chr9.1348 Acer truncatum HOM05D000003 ORTHO05D000006 3.5e-07 60.1 63 39.7
Manes.15G102232 Manihot esculenta HOM05D000003 ORTHO05D014272 4.6e-07 59.7 63 34.9
Atru.chr4.172 Acer truncatum HOM05D000003 ORTHO05D000004 6.0e-07 59.3 64 42.2
Atru.chr2.669 Acer truncatum HOM05D000003 ORTHO05D000004 7.8e-07 58.9 64 37.5
FvH4_3g33091 Fragaria vesca HOM05D000003 ORTHO05D000022 7.8e-07 58.9 66 40.9
Atru.chr2.1761 Acer truncatum HOM05D000003 ORTHO05D000004 1.0e-06 58.5 66 40.9
Atru.chr1.1302 Acer truncatum HOM05D000003 ORTHO05D000004 1.3e-06 58.2 63 39.7
Atru.chr7.256 Acer truncatum HOM05D000003 ORTHO05D000006 1.3e-06 58.2 64 34.4
Manes.09G071284 Manihot esculenta HOM05D000003 ORTHO05D000006 1.7e-06 57.8 63 38.1
Atru.chr1.3365 Acer truncatum HOM05D000003 ORTHO05D000004 2.3e-06 57.4 64 32.8
SGA_v2.0_scaffold245G44786 Striga asiatica HOM05D008014 ORTHO05D016193 2.3e-06 57.4 86 32.6
Atru.chr1.1904 Acer truncatum HOM05D000003 ORTHO05D000004 3.9e-06 56.6 66 40.9
ECA003G0003 Erigeron canadensis HOM05D000003 ORTHO05D000007 3.9e-06 56.6 111 28.8
ECA039G0028 Erigeron canadensis HOM05D003783 ORTHO05D004568 3.9e-06 56.6 111 28.8
Lj3g0003086 Lotus japonicus HOM05D000003 ORTHO05D000006 3.9e-06 56.6 64 34.4
Sabra15G0091800 Salix brachista HOM05D000003 ORTHO05D000007 3.9e-06 56.6 64 35.9
Manes.05G206250 Manihot esculenta HOM05D000003 ORTHO05D000006 5.0e-06 56.2 65 35.4
Atru.chr13.1905 Acer truncatum HOM05D000003 ORTHO05D000004 6.6e-06 55.8 44 54.5
Manes.13G022150 Manihot esculenta HOM05D000003 ORTHO05D000006 6.6e-06 55.8 65 35.4
Manes.17G001983 Manihot esculenta HOM05D000003 ORTHO05D000006 6.6e-06 55.8 65 35.4
Manes.18G025364 Manihot esculenta HOM05D000003 ORTHO05D000006 6.6e-06 55.8 65 35.4
Sabra08G0134900 Salix brachista HOM05D000003 ORTHO05D000006 6.6e-06 55.8 64 35.9
Atru.chr7.714 Acer truncatum HOM05D000003 ORTHO05D000006 8.6e-06 55.5 64 35.9
CSS0020179 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.6e-06 55.5 67 37.3
COL.COLO4_10338 Corchorus olitorius HOM05D000003 ORTHO05D000006 8.6e-06 55.5 64 39.1
Manes.01G048981 Manihot esculenta HOM05D000003 ORTHO05D000006 8.6e-06 55.5 62 33.9
Sabra04G0049100 Salix brachista HOM05D000003 ORTHO05D000007 8.6e-06 55.5 64 35.9


User provided reference genes

Program Settings