Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p047886 Quercus lobata HOM05D007060 ORTHO05D009087 7.8e-241 836.6 401 100.0
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 4.3e-215 751.1 399 87.7
CiPaw.13G043400 Carya illinoinensis HOM05D007060 ORTHO05D009087 4.9e-211 737.6 401 86.0
Prupe.4G266300 Prunus persica HOM05D007060 ORTHO05D009087 3.1e-205 718.4 400 83.2
MD03G1165900 Malus domestica HOM05D007060 ORTHO05D009087 6.4e-203 710.7 401 80.8
CANSAT56G2168 Cannabis sativa HOM05D007060 ORTHO05D009087 1.5e-196 689.5 399 79.9
TAR623G0941 Trochodendron aralioides HOM05D007060 ORTHO05D009087 6.5e-195 684.1 405 78.8
Atru.chr12.1066 Acer truncatum HOM05D007060 ORTHO05D009087 1.4e-194 682.9 399 79.4
Potri.008G018200 Populus trichocarpa HOM05D007060 ORTHO05D009087 3.2e-194 681.8 400 78.2
Duzib106G1772 Durio zibethinus HOM05D007060 ORTHO05D009087 5.5e-194 681.0 404 77.7
GSVIVG01034635001 Vitis vinifera HOM05D007060 ORTHO05D009087 4.6e-193 677.9 397 79.3
RcHm_v2.0_Chr1g0331951 Rosa chinensis HOM05D007060 ORTHO05D009087 6.0e-193 677.6 400 78.0
Manes.07G085000 Manihot esculenta HOM05D007060 ORTHO05D009087 1.3e-192 676.4 400 77.0
TWI63G0697 Tripterygium wilfordii HOM05D007060 ORTHO05D009087 8.7e-192 673.7 403 77.2
Sabra08G0011800 Salix brachista HOM05D007060 ORTHO05D009087 1.9e-191 672.5 400 77.2
Lj3P923T49 Lonicera japonica HOM05D007060 ORTHO05D009087 9.6e-191 670.2 400 78.0
Cpa.g.sc54.25 Carica papaya HOM05D007060 ORTHO05D009087 5.3e-189 664.5 401 75.8
Thecc.10G116400 Theobroma cacao HOM05D007060 ORTHO05D009087 2.6e-188 662.1 402 76.9
CSS0040194 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 5.8e-188 661.0 402 76.6
CSS0037937 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 7.6e-188 660.6 402 76.6
Sed0007060 Sechium edule HOM05D007060 ORTHO05D009087 7.6e-188 660.6 396 75.3
CSS0005765 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.3e-187 659.8 402 76.1
CSS0035234 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.7e-187 659.4 402 76.6
CSS0037157 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.7e-187 659.4 402 76.6
CSS0002387 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.2e-187 659.1 402 76.6
CSS0014623 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.2e-187 659.1 402 76.6
CSS0046160 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.2e-187 659.1 402 76.6
CSS0031015 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 5.0e-187 657.9 402 76.1
CSS0035496 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 5.0e-187 657.9 402 76.1
CSS0028923 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 8.4e-187 657.1 402 76.4
CSS0019796 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.4e-186 656.4 402 76.4
Gorai.N007800 Gossypium raimondii HOM05D007060 ORTHO05D009087 1.4e-186 656.4 402 76.6
CSS0040116 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.9e-186 656.0 402 75.9
ClCG05G021920 Citrullus lanatus HOM05D007060 ORTHO05D009087 2.5e-186 655.6 400 74.2
Cc02_g09400 Coffea canephora HOM05D007060 ORTHO05D009087 9.3e-186 653.7 405 75.6
Lj5g0018387 Lotus japonicus HOM05D007060 ORTHO05D009087 1.6e-185 652.9 396 77.8
Medtr1g090540 Medicago truncatula HOM05D007060 ORTHO05D009087 4.6e-185 651.4 397 76.3
Ciclev10015484m.g Citrus clementina HOM05D007060 ORTHO05D009087 1.0e-184 650.2 398 76.9
Glyma.10G195800 Glycine max HOM05D007060 ORTHO05D009087 1.0e-184 650.2 397 75.8
Nn6g34700 Nelumbo nucifera HOM05D007060 ORTHO05D009087 3.0e-184 648.7 401 74.8
Phvul.007G138500 Phaseolus vulgaris HOM05D007060 ORTHO05D009087 1.9e-183 646.0 397 75.3
Hma1.2p1_0457F.1_g156870 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 2.5e-183 645.6 400 75.0
Dinv08415 Davidia involucrata HOM05D007060 ORTHO05D009087 3.3e-183 645.2 352 83.8
TPR.G37861 Trifolium pratense HOM05D007060 ORTHO05D009087 9.7e-183 643.7 397 76.1
Psat6g172000 Pisum sativum HOM05D007060 ORTHO05D009087 2.2e-182 642.5 397 75.8
MELO3C012336.2 Cucumis melo HOM05D007060 ORTHO05D009087 4.8e-182 641.3 402 72.9
Nitab4.5_0001781g0140 Nicotiana tabacum HOM05D007060 ORTHO05D009087 8.2e-182 640.6 400 75.0
Oeu033276.1 Olea europaea HOM05D007060 ORTHO05D009087 3.1e-181 638.6 403 73.9
CsaV3_5G035220 Cucumis sativus L. HOM05D007060 ORTHO05D009087 1.5e-180 636.3 402 72.4
VMungo0720G1293 Vigna mungo HOM05D007060 ORTHO05D009087 2.0e-180 636.0 401 74.1
Solyc11g006560.3 Solanum lycopersicum HOM05D007060 ORTHO05D009087 3.4e-180 635.2 399 73.4
PGR142G1122 Punica granatum HOM05D007060 ORTHO05D009087 6.5e-179 630.9 403 71.7
Sopen11g002500 Solanum pennellii HOM05D007060 ORTHO05D009087 6.5e-179 630.9 399 73.2
PGSC0003DMG400001998 Solanum tuberosum HOM05D007060 ORTHO05D009087 1.1e-178 630.2 399 72.9
Ca_10429_v3 Cicer arietinum L. HOM05D007060 ORTHO05D009087 1.4e-178 629.8 390 75.6
Nitab4.5_0007799g0060 Nicotiana tabacum HOM05D007060 ORTHO05D009087 1.9e-178 629.4 395 73.9
COL.COLO4_07825 Corchorus olitorius HOM05D007060 ORTHO05D009087 2.5e-178 629.0 404 72.5
CAN.G143.24 Capsicum annuum HOM05D007060 ORTHO05D009087 4.6e-177 624.8 398 73.1
Aqoxy1G00669 Aquilegia oxysepala HOM05D007060 ORTHO05D009087 6.1e-177 624.4 395 74.4
Peaxi162Scf00725g00056 Petunia axillaris HOM05D007060 ORTHO05D010136 3.0e-176 622.1 395 73.2
Gohir.D06G177400 Gossypium hirsutum HOM05D007060 ORTHO05D009087 4.3e-175 618.2 374 76.5
Lsat_1_v5_gn_2_105821 Lactuca sativa HOM05D007060 ORTHO05D009087 4.3e-175 618.2 402 70.9
THA.LOC104816472 Tarenaya hassleriana HOM05D007060 ORTHO05D009087 4.3e-175 618.2 400 72.2
MSTRG.9036 Avicennia marina HOM05D007060 ORTHO05D009087 8.2e-174 614.0 402 70.6
AL3G22100 Arabidopsis lyrata HOM05D007060 ORTHO05D009087 1.1e-173 613.6 399 70.9
Carub.0003s0986 Capsella rubella HOM05D007060 ORTHO05D009087 5.9e-172 607.8 399 70.7
AT3G10630 Arabidopsis thaliana HOM05D007060 ORTHO05D009087 1.7e-171 606.3 399 70.2
ECA238G3502 Erigeron canadensis HOM05D007060 ORTHO05D009087 1.7e-171 606.3 401 69.1
Sp3g08940 Schrenkiella parvula HOM05D007060 ORTHO05D009087 2.9e-171 605.5 396 70.7
CARHR085210 Cardamine hirsuta HOM05D007060 ORTHO05D009087 1.9e-170 602.8 400 70.0
Thhalv10020598m.g Eutrema salsugineum HOM05D007060 ORTHO05D009087 1.9e-170 602.8 398 70.4
HanXRQChr02g0053541 Helianthus annuus HOM05D007060 ORTHO05D009087 2.1e-169 599.4 401 69.6
PGR142G0278 Punica granatum HOM05D007060 ORTHO05D009087 6.1e-169 597.8 403 69.5
Rhsim03G0096200 Rhododendron simsii HOM05D007060 ORTHO05D009087 1.0e-168 597.0 403 70.0
DCAR_005120 Daucus carota HOM05D007060 ORTHO05D009087 7.4e-167 590.9 368 73.4
A01p41570 Brassica napus HOM05D007060 ORTHO05D009087 9.7e-167 590.5 401 69.8
Migut.F00850 Erythranthe guttata HOM05D007060 ORTHO05D009087 9.7e-167 590.5 400 67.8
BraA01t04232Z Brassica rapa HOM05D007060 ORTHO05D009087 1.7e-166 589.7 401 69.3
BolC1t05373H Brassica oleracea HOM05D007060 ORTHO05D009087 2.6e-164 582.4 400 68.2
Sopen11g002460 Solanum pennellii HOM05D007060 ORTHO05D009087 2.6e-164 582.4 369 72.9
Sopen11g002480 Solanum pennellii HOM05D007060 ORTHO05D009087 1.3e-163 580.1 358 74.0
Actinidia03837 Actinidia chinensis HOM05D007060 ORTHO05D009087 8.5e-163 577.4 355 75.8
Eucgr.G02680 Eucalyptus grandis HOM05D007060 ORTHO05D009087 3.5e-156 555.4 351 72.4
SalBow1G5690 Salvia bowleyana HOM05D007060 ORTHO05D009087 7.7e-156 554.3 401 66.3
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 1.7e-155 553.1 402 65.4
unitig_46.g18644 Utricularia gibba HOM05D007060 ORTHO05D009087 2.2e-155 552.7 400 64.5
Os09g0296700 Oryza sativa ssp. japonica HOM05D007060 ORTHO05D009087 1.6e-148 530.0 403 62.8
Zm00001eb309100 Zea mays HOM05D007060 ORTHO05D009087 5.5e-146 521.5 407 62.4
SEGI_33772 Sequoiadendron giganteum HOM05D007060 ORTHO05D009087 1.2e-145 520.4 398 61.1
ATR0772G206 Amborella trichopoda HOM05D007060 ORTHO05D009087 2.6e-143 512.7 405 59.0
BcaB04g21186 Brassica carinata HOM05D007060 ORTHO05D009087 3.5e-140 502.3 400 62.0
Lalb_Chr21g0312821 Lupinus albus HOM05D007060 ORTHO05D009087 9.2e-133 477.6 293 77.1
SMO203G0203 Selaginella moellendorffii HOM05D007060 ORTHO05D009087 5.0e-131 471.9 394 56.6
AagrBONN_evm.TU.Sc2ySwM_344.3615 Anthoceros agrestis HOM05D007060 ORTHO05D009087 6.8e-128 461.5 401 56.4
Glyma.20G194300 Glycine max HOM05D007060 ORTHO05D009087 8.1e-121 438.0 336 64.3
SHI22512 Sapria himalayana HOM05D007060 ORTHO05D009087 5.2e-120 435.3 352 60.2
Pp3c6_17860 Physcomitrium patens HOM05D007060 ORTHO05D009087 2.9e-102 376.3 402 48.0
CBR_g29369 Chara braunii HOM05D007060 ORTHO05D009087 2.2e-94 350.1 290 57.2
Hma1.2p1_0826F.1_g224930 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 5.6e-90 335.5 210 75.2
MCO11G427 Micromonas commoda HOM05D007060 ORTHO05D009087 1.4e-85 320.9 429 41.0
Cre02.g118801 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 2.6e-79 300.1 436 40.1
FAN24G3568 Fragaria x ananassa HOM05D007060 ORTHO05D009087 1.1e-69 268.1 400 40.8
PRCOL_00001658 Prasinoderma coloniale HOM05D007060 ORTHO05D009087 2.1e-68 263.8 451 36.4
TAR625G0310 Trochodendron aralioides HOM05D007060 ORTHO05D009087 2.1e-68 263.8 303 46.9
FvH4_5g28400 Fragaria vesca HOM05D007060 ORTHO05D009087 4.6e-68 262.7 161 74.5
HPP92_006362 Vanilla planifolia HOM05D007060 ORTHO05D009087 2.0e-42 177.6 118 65.3
Cre09.g386732 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 1.7e-38 164.5 396 27.8
FAN03G2415 Fragaria x ananassa HOM05D007060 ORTHO05D009087 2.4e-32 144.1 93 75.3
PRCOL_00006151 Prasinoderma coloniale HOM05D007060 ORTHO05D048979 1.9e-29 134.4 326 30.4
MBI01_g04536_MAGBIO Magnolia biondii HOM05D007060 ORTHO05D009087 8.0e-20 102.4 70 71.4
MCO05G161 Micromonas commoda HOM05D007060 ORTHO05D048979 8.0e-20 102.4 292 28.1
AL1G24060 Arabidopsis lyrata HOM05D007060 ORTHO05D023607 1.4e-16 91.7 59 69.5
CBR_g29367 Chara braunii HOM05D007060 ORTHO05D009087 5.0e-06 56.6 79 41.8


User provided reference genes

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