Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p046828 Quercus lobata HOM05D007506 ORTHO05D008409 3.1e-30 134.8 84 100.0
CiPaw.14G033800 Carya illinoinensis HOM05D007506 ORTHO05D008409 5.1e-17 90.9 83 71.1
Potri.010G240401 Populus trichocarpa HOM05D007506 ORTHO05D008409 6.8e-14 80.5 85 65.9
Haze_03301 Corylus avellana HOM05D007506 ORTHO05D008409 1.5e-13 79.3 61 73.8
RcHm_v2.0_Chr1g0331731 Rosa chinensis HOM05D007506 ORTHO05D008409 4.4e-13 77.8 86 57.0
Atru.chr12.1049 Acer truncatum HOM05D007506 ORTHO05D008409 7.6e-13 77.0 59 78.0
Ciclev10017346m.g Citrus clementina HOM05D007506 ORTHO05D008409 1.7e-12 75.9 60 75.0
Sabra08G0010500 Salix brachista HOM05D007506 ORTHO05D008409 1.7e-12 75.9 81 64.2
PGR142G2547 Punica granatum HOM05D007506 ORTHO05D008409 2.9e-12 75.1 85 62.4
Potri.008G016801 Populus trichocarpa HOM05D007506 ORTHO05D008409 6.4e-12 73.9 85 61.2
Manes.07G086800 Manihot esculenta HOM05D007506 ORTHO05D008409 8.4e-12 73.6 60 71.7
THA.LOC104816468 Tarenaya hassleriana HOM05D012863 ORTHO05D008409 1.2e-10 69.7 91 49.5
Duzib106G0675 Durio zibethinus HOM05D007506 ORTHO05D008409 3.5e-10 68.2 62 69.4
TWI38G1985 Tripterygium wilfordii HOM05D007506 ORTHO05D008409 3.5e-10 68.2 54 75.9
Thecc.10G114000 Theobroma cacao HOM05D007506 ORTHO05D008409 4.6e-10 67.8 61 70.5
THA.LOC109117254 Tarenaya hassleriana HOM05D012863 ORTHO05D008409 1.7e-09 65.9 89 48.3
Cfa010331 Carpinus fangiana HOM05D007506 ORTHO05D008409 3.0e-09 65.1 50 74.0
Lj5g0016646 Lotus japonicus HOM05D007506 ORTHO05D008409 5.1e-09 64.3 82 63.4
Glyma.10G277900 Glycine max HOM05D007506 ORTHO05D008409 1.1e-08 63.2 84 53.6
TAR633G2594 Trochodendron aralioides HOM05D007506 ORTHO05D008409 1.1e-08 63.2 61 62.3
Cpa.g.sc54.9 Carica papaya HOM05D007506 ORTHO05D008409 1.5e-08 62.8 54 70.4
Ca_25653_v3 Cicer arietinum L. HOM05D007506 ORTHO05D008409 1.5e-08 62.8 86 55.8
CANSAT56G4328 Cannabis sativa HOM05D007506 ORTHO05D008409 1.9e-08 62.4 82 59.8
Manes.10G062500 Manihot esculenta HOM05D007506 ORTHO05D008409 3.3e-08 61.6 82 56.1
Medtr1g111840 Medicago truncatula HOM05D007506 ORTHO05D008409 4.3e-08 61.2 84 53.6
Sabra10G0188200 Salix brachista HOM05D007506 ORTHO05D008409 5.6e-08 60.8 79 51.9
CDE12G0642 Ceratophyllum demersum HOM05D007506 ORTHO05D008409 1.6e-07 59.3 81 61.7
Hund06790 Selenicereus undatus HOM05D007506 ORTHO05D008409 2.8e-07 58.5 81 48.1
TPR.G2499 Trifolium pratense HOM05D007506 ORTHO05D008409 2.8e-07 58.5 75 54.7
MD07G1070900 Malus domestica HOM05D007506 ORTHO05D008409 3.6e-07 58.2 84 58.3
EL10Ac4g08692 Beta vulgaris HOM05D007506 ORTHO05D008409 6.2e-07 57.4 67 56.7
FvH4_7g05151 Fragaria vesca HOM05D007506 ORTHO05D008409 8.1e-07 57.0 83 47.0
VMungo0720G0153 Vigna mungo HOM05D007506 ORTHO05D008409 8.1e-07 57.0 88 52.3
PSO801G0534 Papaver somniferum HOM05D007506 ORTHO05D008409 1.1e-06 56.6 84 48.8
GSVIVG01010679001 Vitis vinifera HOM05D007506 ORTHO05D008409 1.1e-06 56.6 40 75.0
Glyma.20G110900 Glycine max HOM05D007506 ORTHO05D008409 1.4e-06 56.2 85 51.8
Phvul.007G023500 Phaseolus vulgaris HOM05D007506 ORTHO05D008409 1.4e-06 56.2 87 49.4
CSS0050385 Camellia sinensis var. sinensis HOM05D007506 ORTHO05D008409 1.8e-06 55.8 57 66.7
FAN03G1835 Fragaria x ananassa HOM05D007506 ORTHO05D008409 2.4e-06 55.5 81 46.9
Migut.F00865 Erythranthe guttata HOM05D007506 ORTHO05D008409 3.1e-06 55.1 65 56.9
PSO339G4482 Papaver somniferum HOM05D007506 ORTHO05D008409 3.1e-06 55.1 84 47.6
Zm00001eb242800 Zea mays HOM05D007506 ORTHO05D008409 3.1e-06 55.1 50 66.0
CARHR208540 Cardamine hirsuta HOM05D012863 ORTHO05D008409 4.0e-06 54.7 83 48.2
MBI17_g08330_MAGBIO Magnolia biondii HOM05D007506 ORTHO05D008409 4.0e-06 54.7 80 53.8
Psat6g238400 Pisum sativum HOM05D007506 ORTHO05D008409 4.0e-06 54.7 85 60.0
Peaxi162Scf00519g00621 Petunia axillaris HOM05D007506 ORTHO05D008409 5.2e-06 54.3 57 63.2
AT5G04750 Arabidopsis thaliana HOM05D012863 ORTHO05D008409 6.9e-06 53.9 89 56.2
CiPaw.13G041100 Carya illinoinensis HOM05D007506 ORTHO05D008409 6.9e-06 53.9 71 64.8
SalBow3G3829 Salvia bowleyana HOM05D007506 ORTHO05D008409 9.0e-06 53.5 49 61.2


User provided reference genes

Program Settings