Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p045462 Quercus lobata HOM05D000007 ORTHO05D000039 6.6e-71 270.8 156 100.0
QL04p045353 Quercus lobata HOM05D000007 ORTHO05D000039 2.6e-27 125.9 217 41.0
QL04p045359 Quercus lobata HOM05D000007 ORTHO05D000039 5.5e-17 91.7 59 78.0
QL04p044939 Quercus lobata HOM05D000007 ORTHO05D000039 8.8e-15 84.3 56 75.0
QL04p044961 Quercus lobata HOM05D000007 ORTHO05D000039 8.8e-15 84.3 56 75.0
QL04p037150 Quercus lobata HOM05D000007 ORTHO05D000039 2.8e-13 79.3 55 74.5
QL04p045477 Quercus lobata HOM05D000007 ORTHO05D000039 4.8e-13 78.6 55 69.1
QL04p045513 Quercus lobata HOM05D000007 ORTHO05D000039 6.3e-13 78.2 57 73.7
QL04p044894 Quercus lobata HOM05D000007 ORTHO05D000039 8.2e-13 77.8 57 71.9
QL04p045652 Quercus lobata HOM05D000007 ORTHO05D000039 1.1e-12 77.4 56 67.9
QL04p037064 Quercus lobata HOM05D000007 ORTHO05D000039 3.1e-12 75.9 56 69.6
QL04p045967 Quercus lobata HOM05D000007 ORTHO05D000039 3.1e-12 75.9 212 32.1
QL04p036320 Quercus lobata HOM05D000007 ORTHO05D000039 7.0e-12 74.7 55 69.1
QL04p036880 Quercus lobata HOM05D000007 ORTHO05D000039 7.0e-12 74.7 55 69.1
QL04p037101 Quercus lobata HOM05D000007 ORTHO05D000039 7.0e-12 74.7 56 69.6
QL04p044901 Quercus lobata HOM05D000007 ORTHO05D000039 7.0e-12 74.7 57 70.2
QL04p045611 Quercus lobata HOM05D000007 ORTHO05D000039 9.1e-12 74.3 55 69.1
QL04p036871 Quercus lobata HOM05D000007 ORTHO05D000039 1.2e-11 73.9 55 69.1
QL11p050679 Quercus lobata HOM05D000007 ORTHO05D000039 1.2e-11 73.9 56 62.5
QL04p044969 Quercus lobata HOM05D000007 ORTHO05D000039 1.6e-11 73.6 57 68.4
QL11p050323 Quercus lobata HOM05D000007 ORTHO05D000039 2.6e-11 72.8 59 62.7
QL04p037158 Quercus lobata HOM05D000007 ORTHO05D000039 4.5e-11 72.0 56 67.9
QL04p036314 Quercus lobata HOM05D000007 ORTHO05D000039 5.9e-11 71.6 55 65.5
QL04p049972 Quercus lobata HOM05D000007 ORTHO05D000039 5.9e-11 71.6 55 65.5
QL04p067441 Quercus lobata HOM05D000007 ORTHO05D000039 1.0e-10 70.9 54 64.8
QL04p067556 Quercus lobata HOM05D000007 ORTHO05D000039 1.0e-10 70.9 54 64.8
QL04p087902 Quercus lobata HOM05D000007 ORTHO05D000039 1.0e-10 70.9 58 65.5
QL04p045916 Quercus lobata HOM05D000007 ORTHO05D000039 1.3e-10 70.5 57 64.9
QL09p021311 Quercus lobata HOM05D000007 ORTHO05D000039 1.3e-10 70.5 56 64.3
QL11p050453 Quercus lobata HOM05D000007 ORTHO05D000039 1.3e-10 70.5 59 64.4
QL04p036868 Quercus lobata HOM05D000007 ORTHO05D000039 1.7e-10 70.1 53 64.2
QL04p037119 Quercus lobata HOM05D000007 ORTHO05D000039 2.2e-10 69.7 55 65.5
QL11p050309 Quercus lobata HOM05D000007 ORTHO05D000039 2.2e-10 69.7 59 61.0
QL11p050435 Quercus lobata HOM05D000007 ORTHO05D000039 2.2e-10 69.7 48 66.7
QL04p045563 Quercus lobata HOM05D000007 ORTHO05D000039 2.9e-10 69.3 55 67.3
QL04p045027 Quercus lobata HOM05D000007 ORTHO05D000039 3.8e-10 68.9 59 61.0
QL04p037076 Quercus lobata HOM05D000007 ORTHO05D000039 8.5e-10 67.8 55 63.6
QL04p044868 Quercus lobata HOM05D000007 ORTHO05D000039 1.5e-09 67.0 55 63.6
QL04p036302 Quercus lobata HOM05D000007 ORTHO05D000039 2.5e-09 66.2 54 63.0
QL04p049921 Quercus lobata HOM05D000007 ORTHO05D000039 3.2e-09 65.9 55 63.6
QL04p036929 Quercus lobata HOM05D000007 ORTHO05D000039 1.2e-08 63.9 54 59.3
Haze_12718 Corylus avellana HOM05D000007 ORTHO05D000039 2.1e-08 63.2 45 64.4
QL04p036087 Quercus lobata HOM05D000007 ORTHO05D000039 2.1e-08 63.2 45 64.4
QL09p021327 Quercus lobata HOM05D000007 ORTHO05D000039 2.7e-08 62.8 55 58.2
QL09p022599 Quercus lobata HOM05D000007 ORTHO05D000039 2.7e-08 62.8 57 56.1
Lj1C654T14 Lonicera japonica HOM05D000007 ORTHO05D000039 3.6e-08 62.4 46 58.7
Lju1601A0G41 Lonicera japonica HOM05D000007 ORTHO05D000039 3.6e-08 62.4 46 58.7
QL07p009573 Quercus lobata HOM05D000007 ORTHO05D000039 4.7e-08 62.0 51 60.8
QL12p002756 Quercus lobata HOM05D000007 ORTHO05D000039 4.7e-08 62.0 55 58.2
QL04p019108 Quercus lobata HOM05D000007 ORTHO05D000039 6.1e-08 61.6 46 60.9
QL04p036457 Quercus lobata HOM05D000007 ORTHO05D000039 8.0e-08 61.2 44 65.9
QL07p009619 Quercus lobata HOM05D000007 ORTHO05D000039 8.0e-08 61.2 56 55.4
QL07p009510 Quercus lobata HOM05D000007 ORTHO05D000039 1.0e-07 60.8 51 58.8
QL12p002576 Quercus lobata HOM05D000007 ORTHO05D000039 1.0e-07 60.8 54 59.3
QL04p019471 Quercus lobata HOM05D000007 ORTHO05D000039 1.4e-07 60.5 45 62.2
QL07p009589 Quercus lobata HOM05D000007 ORTHO05D000039 1.4e-07 60.5 43 67.4
Haze_12717 Corylus avellana HOM05D000007 ORTHO05D000039 1.8e-07 60.1 45 62.2
Lj1P653T16 Lonicera japonica HOM05D000007 ORTHO05D000039 1.8e-07 60.1 46 56.5
QL04p019179 Quercus lobata HOM05D000007 ORTHO05D000039 1.8e-07 60.1 46 60.9
QL04p019206 Quercus lobata HOM05D000007 ORTHO05D000039 1.8e-07 60.1 46 60.9
QL04p036953 Quercus lobata HOM05D000007 ORTHO05D000039 1.8e-07 60.1 57 59.6
EL10Ac8g18631 Beta vulgaris HOM05D000007 ORTHO05D000017 2.3e-07 59.7 44 65.9
Oeu041630.1 Olea europaea HOM05D000007 ORTHO05D000039 2.3e-07 59.7 44 61.4
QL07p009452 Quercus lobata HOM05D000007 ORTHO05D000039 2.3e-07 59.7 46 60.9
Sc07g0006650 Simmondsia chinensis HOM05D000007 ORTHO05D000039 2.3e-07 59.7 58 51.7
QL04p049997 Quercus lobata HOM05D000007 ORTHO05D000039 3.0e-07 59.3 53 54.7
QL05p031307 Quercus lobata HOM05D000007 ORTHO05D000039 4.0e-07 58.9 41 68.3
QL07p009487 Quercus lobata HOM05D000007 ORTHO05D000039 4.0e-07 58.9 51 58.8
QL09p022606 Quercus lobata HOM05D000007 ORTHO05D000039 4.0e-07 58.9 57 54.4
QL09p022619 Quercus lobata HOM05D000007 ORTHO05D000039 4.0e-07 58.9 55 54.5
QL04p019213 Quercus lobata HOM05D000007 ORTHO05D000039 5.2e-07 58.5 45 60.0
Dinv06539 Davidia involucrata HOM05D000007 ORTHO05D000039 6.7e-07 58.2 44 65.9
MD11G1203000 Malus domestica HOM05D000007 ORTHO05D005026 6.7e-07 58.2 45 60.0
QL04p018974 Quercus lobata HOM05D000007 ORTHO05D000039 6.7e-07 58.2 47 57.4
QL07p009219 Quercus lobata HOM05D000007 ORTHO05D000039 6.7e-07 58.2 46 58.7
QL09p021424 Quercus lobata HOM05D000007 ORTHO05D000039 6.7e-07 58.2 54 57.4
AUR62039090 Chenopodium quinoa HOM05D000007 ORTHO05D000017 8.8e-07 57.8 44 63.6
QL04p018852 Quercus lobata HOM05D000007 ORTHO05D000039 8.8e-07 57.8 46 58.7
QL04p018874 Quercus lobata HOM05D000007 ORTHO05D000039 8.8e-07 57.8 47 57.4
QL04p019005 Quercus lobata HOM05D000007 ORTHO05D000039 8.8e-07 57.8 41 63.4
QL09p022536 Quercus lobata HOM05D000007 ORTHO05D000039 8.8e-07 57.8 55 50.9
Cc03_g07170 Coffea canephora HOM05D000007 ORTHO05D000017 1.2e-06 57.4 45 57.8
PSO133G0007 Papaver somniferum HOM05D000007 ORTHO05D000017 1.2e-06 57.4 46 56.5
QL04p019171 Quercus lobata HOM05D000007 ORTHO05D000039 1.2e-06 57.4 46 60.9
QL08p064911 Quercus lobata HOM05D000007 ORTHO05D000017 1.2e-06 57.4 55 52.7
AUR62021851 Chenopodium quinoa HOM05D000007 ORTHO05D000017 1.5e-06 57.0 48 54.2
QL04p019084 Quercus lobata HOM05D000007 ORTHO05D000039 1.5e-06 57.0 45 60.0
QL04p019437 Quercus lobata HOM05D000007 ORTHO05D000039 1.5e-06 57.0 46 58.7
QL09p022589 Quercus lobata HOM05D000007 ORTHO05D000039 1.5e-06 57.0 56 51.8
CANSAT56G3723 Cannabis sativa HOM05D000007 ORTHO05D000017 2.0e-06 56.6 41 63.4
Lj1C654T3 Lonicera japonica HOM05D000007 ORTHO05D000039 2.0e-06 56.6 46 54.3
Actinidia37850 Actinidia chinensis HOM05D000007 ORTHO05D000039 2.6e-06 56.2 46 56.5
CAN.G1597.1 Capsicum annuum HOM05D000007 ORTHO05D000017 2.6e-06 56.2 47 55.3
CAN.G1597.2 Capsicum annuum HOM05D000007 ORTHO05D000017 2.6e-06 56.2 47 55.3
CAN.G4685.1 Capsicum annuum HOM05D000007 ORTHO05D000017 2.6e-06 56.2 47 55.3
CAN.G749.10 Capsicum annuum HOM05D000007 ORTHO05D014560 2.6e-06 56.2 50 60.0
Hma1.2p1_1797F.1_g302840 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 2.6e-06 56.2 45 57.8
Oeu022123.1 Olea europaea HOM05D000007 ORTHO05D000017 2.6e-06 56.2 62 48.4
QL04p019096 Quercus lobata HOM05D000007 ORTHO05D000039 2.6e-06 56.2 45 57.8
QL09p040020 Quercus lobata HOM05D000007 ORTHO05D000039 2.6e-06 56.2 43 62.8
Sc25g0005500 Simmondsia chinensis HOM05D000007 ORTHO05D000017 2.6e-06 56.2 51 49.0
CSS0048184 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 3.3e-06 55.8 44 56.8
Migut.A00076 Erythranthe guttata HOM05D000007 ORTHO05D005385 3.3e-06 55.8 49 51.0
Lj6P663T47 Lonicera japonica HOM05D000007 ORTHO05D000017 3.3e-06 55.8 45 55.6
Medtr3g083660 Medicago truncatula HOM05D000007 ORTHO05D000017 3.3e-06 55.8 92 32.6
Nitab4.5_0000249g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000039 3.3e-06 55.8 46 52.2
QL07p009479 Quercus lobata HOM05D000007 ORTHO05D000039 3.3e-06 55.8 57 50.9
A08p25530 Brassica napus HOM05D000171 ORTHO05D000101 4.4e-06 55.5 46 52.2
BraA08t34506Z Brassica rapa HOM05D000171 ORTHO05D000101 4.4e-06 55.5 46 52.2
Dinv32031 Davidia involucrata HOM05D000007 ORTHO05D000017 4.4e-06 55.5 46 58.7
Migut.N00360 Erythranthe guttata HOM05D000007 ORTHO05D000017 4.4e-06 55.5 46 56.5
Peaxi162Scf00326g00061 Petunia axillaris HOM05D000007 ORTHO05D000039 4.4e-06 55.5 44 63.6
QL04p018990 Quercus lobata HOM05D000007 ORTHO05D000039 4.4e-06 55.5 45 55.6
QL07p009308 Quercus lobata HOM05D000007 ORTHO05D000039 4.4e-06 55.5 41 68.3
QL07p009412 Quercus lobata HOM05D000007 ORTHO05D000039 4.4e-06 55.5 41 68.3
QL09p044808 Quercus lobata HOM05D000007 ORTHO05D000039 4.4e-06 55.5 51 54.9
vmacro00488 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 4.4e-06 55.5 54 48.1
Aqoxy6G01619 Aquilegia oxysepala HOM05D021765 ORTHO05D018413 5.7e-06 55.1 46 54.3
EL10Ac9g22695 Beta vulgaris HOM05D000007 ORTHO05D000039 5.7e-06 55.1 44 61.4
Eucgr.C02180 Eucalyptus grandis HOM05D000007 ORTHO05D000039 5.7e-06 55.1 42 59.5
Lju1601C0T10 Lonicera japonica HOM05D000007 ORTHO05D000039 5.7e-06 55.1 46 52.2
Medtr3g013770 Medicago truncatula HOM05D000007 ORTHO05D000017 5.7e-06 55.1 58 46.6
QL04p019522 Quercus lobata HOM05D000007 ORTHO05D000039 5.7e-06 55.1 46 56.5
QL04p045953 Quercus lobata HOM05D000007 ORTHO05D000039 5.7e-06 55.1 31 80.6
SalBow8G1563 Salvia bowleyana HOM05D000007 ORTHO05D005385 5.7e-06 55.1 46 50.0
EL10Ac8g18411 Beta vulgaris HOM05D000007 ORTHO05D000017 7.5e-06 54.7 43 58.1
CAN.G4837.1 Capsicum annuum HOM05D000007 ORTHO05D000017 7.5e-06 54.7 46 60.9
AUR62032927 Chenopodium quinoa HOM05D000007 ORTHO05D000039 7.5e-06 54.7 47 53.2
AUR62039091 Chenopodium quinoa HOM05D000007 ORTHO05D000017 7.5e-06 54.7 44 59.1
Dinv12703 Davidia involucrata HOM05D000007 ORTHO05D000039 7.5e-06 54.7 44 54.5
Dinv15480 Davidia involucrata HOM05D000007 ORTHO05D000039 7.5e-06 54.7 58 46.6
Nitab4.5_0004974g0060 Nicotiana tabacum HOM05D000007 ORTHO05D000017 7.5e-06 54.7 43 55.8
PSO210G5046 Papaver somniferum HOM05D000007 ORTHO05D000017 7.5e-06 54.7 45 57.8
Potri.008G199800 Populus trichocarpa HOM05D000007 ORTHO05D000017 7.5e-06 54.7 45 51.1
Prupe.6G214700 Prunus persica HOM05D000007 ORTHO05D000017 7.5e-06 54.7 51 52.9
QL04p019507 Quercus lobata HOM05D000007 ORTHO05D000039 7.5e-06 54.7 46 58.7
QL07p009501 Quercus lobata HOM05D000007 ORTHO05D000039 7.5e-06 54.7 43 65.1
vmacro00057 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 7.5e-06 54.7 46 56.5
vmacro00185 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 7.5e-06 54.7 44 59.1
vmacro06021 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 7.5e-06 54.7 42 54.8
vmacro23134 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 7.5e-06 54.7 44 59.1
C03p75240 Brassica napus HOM05D000171 ORTHO05D000101 9.7e-06 54.3 40 60.0
BolC3t19783H Brassica oleracea HOM05D000171 ORTHO05D000101 9.7e-06 54.3 40 60.0
Cc03_g07520 Coffea canephora HOM05D000007 ORTHO05D000017 9.7e-06 54.3 42 61.9
Cc09_g00820 Coffea canephora HOM05D000007 ORTHO05D000017 9.7e-06 54.3 45 53.3
Haze_07023 Corylus avellana HOM05D000007 ORTHO05D000017 9.7e-06 54.3 49 49.0
Dinv21276 Davidia involucrata HOM05D000007 ORTHO05D000039 9.7e-06 54.3 46 56.5
Hma1.2p1_0691F.1_g204065 Hydrangea macrophylla HOM05D000007 ORTHO05D000017 9.7e-06 54.3 46 50.0
Lj3P918T26 Lonicera japonica HOM05D000007 ORTHO05D000017 9.7e-06 54.3 48 54.2
Nitab4.5_0000635g0180 Nicotiana tabacum HOM05D000007 ORTHO05D000039 9.7e-06 54.3 46 54.3
Potri.012G014700 Populus trichocarpa HOM05D000007 ORTHO05D000039 9.7e-06 54.3 47 57.4
QL04p019040 Quercus lobata HOM05D000007 ORTHO05D000039 9.7e-06 54.3 41 61.0
QL04p045941 Quercus lobata HOM05D000007 ORTHO05D000039 9.7e-06 54.3 31 80.6
QL07p009257 Quercus lobata HOM05D000007 ORTHO05D000039 9.7e-06 54.3 43 62.8
QL07p009303 Quercus lobata HOM05D000007 ORTHO05D000039 9.7e-06 54.3 43 62.8
QL07p013622 Quercus lobata HOM05D000007 ORTHO05D000039 9.7e-06 54.3 43 60.5
QL07p013628 Quercus lobata HOM05D000007 ORTHO05D000039 9.7e-06 54.3 43 60.5
Rhsim01G0117500 Rhododendron simsii HOM05D000007 ORTHO05D000017 9.7e-06 54.3 52 44.2
Solyc01g008660.4 Solanum lycopersicum HOM05D000007 ORTHO05D000017 9.7e-06 54.3 45 55.6
Sopen01g004180 Solanum pennellii HOM05D000007 ORTHO05D000017 9.7e-06 54.3 45 55.6


User provided reference genes

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