Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p044761 Quercus lobata HOM05D001373 ORTHO05D001330 1.5e-136 489.6 253 100.0
QL04p044735 Quercus lobata HOM05D001373 ORTHO05D001330 2.6e-56 223.0 124 94.4
QL04p043569 Quercus lobata HOM05D001373 ORTHO05D001330 3.7e-55 219.2 124 93.5
QL04p077975 Quercus lobata HOM05D001373 ORTHO05D001330 5.9e-53 211.8 124 90.3
QL04p044773 Quercus lobata HOM05D001373 ORTHO05D001330 1.4e-49 200.7 124 85.5
QL04p044754 Quercus lobata HOM05D001373 ORTHO05D001330 4.9e-47 192.2 124 81.5
Cfa011258 Carpinus fangiana HOM05D001373 ORTHO05D001330 2.4e-46 189.9 124 78.2
CiPaw.14G032600 Carya illinoinensis HOM05D001373 ORTHO05D001330 7.0e-46 188.3 124 79.0
Haze_02525 Corylus avellana HOM05D001373 ORTHO05D001330 6.6e-44 181.8 124 75.8
CiPaw.13G038300 Carya illinoinensis HOM05D001373 ORTHO05D001330 1.2e-42 177.6 123 74.0
Prupe.2G079900 Prunus persica HOM05D001373 ORTHO05D001330 5.8e-40 168.7 125 72.0
Atru.chr12.1002 Acer truncatum HOM05D001373 ORTHO05D001330 1.3e-39 167.5 124 70.2
Atru.chr12.1004 Acer truncatum HOM05D001373 ORTHO05D001330 2.9e-39 166.4 123 69.1
RcHm_v2.0_Chr1g0332771 Rosa chinensis HOM05D001373 ORTHO05D001330 6.4e-39 165.2 125 71.2
Ciclev10031562m.g Citrus clementina HOM05D001373 ORTHO05D001330 1.1e-38 164.5 124 67.7
FAN01G2854 Fragaria x ananassa HOM05D001373 ORTHO05D001330 1.8e-38 163.7 125 69.6
FAN10G3078 Fragaria x ananassa HOM05D001373 ORTHO05D001330 1.8e-38 163.7 125 69.6
FvH4_7g05740 Fragaria vesca HOM05D001373 ORTHO05D001330 2.4e-38 163.3 125 69.6
CANSAT56G3177 Cannabis sativa HOM05D001373 ORTHO05D001330 3.2e-38 162.9 124 67.7
FAN03G2160 Fragaria x ananassa HOM05D001373 ORTHO05D001330 9.2e-38 161.4 125 68.8
Eucgr.G02698 Eucalyptus grandis HOM05D001373 ORTHO05D001330 1.2e-37 161.0 124 68.5
Sc09g0005480 Simmondsia chinensis HOM05D001373 ORTHO05D001330 3.5e-37 159.5 124 67.7
TPR.G18692 Trifolium pratense HOM05D001373 ORTHO05D001330 3.5e-37 159.5 124 66.1
TWI63G1122 Tripterygium wilfordii HOM05D001373 ORTHO05D001330 7.8e-37 158.3 124 68.5
Actinidia34717 Actinidia chinensis HOM05D001373 ORTHO05D001330 1.0e-36 157.9 124 65.3
CANSAT01G1412 Cannabis sativa HOM05D001373 ORTHO05D001330 1.0e-36 157.9 127 66.9
Thecc.10G107800 Theobroma cacao HOM05D001373 ORTHO05D001330 1.0e-36 157.9 124 67.7
GSVIVG01011268001 Vitis vinifera HOM05D001373 ORTHO05D001330 1.0e-36 157.9 124 66.9
Cpa.g.sc183.3 Carica papaya HOM05D001373 ORTHO05D001330 1.3e-36 157.5 124 65.3
FAN06G0236 Fragaria x ananassa HOM05D001373 ORTHO05D001330 2.3e-36 156.8 120 69.2
ECA232G4280 Erigeron canadensis HOM05D001373 ORTHO05D001330 3.0e-36 156.4 124 64.5
Lj5g0003680 Lotus japonicus HOM05D001373 ORTHO05D001330 3.9e-36 156.0 124 65.3
Lsat_1_v5_gn_0_7541 Lactuca sativa HOM05D001373 ORTHO05D001330 8.6e-36 154.8 124 63.7
arahy.Tifrunner.gnm1.ann1.DMB65R Arachis hypogaea HOM05D001373 ORTHO05D001330 1.5e-35 154.1 124 61.3
COL.COLO4_37500 Corchorus olitorius HOM05D001373 ORTHO05D001330 1.9e-35 153.7 124 63.7
Lalb_Chr06g0170201 Lupinus albus HOM05D001373 ORTHO05D001330 1.9e-35 153.7 124 64.5
arahy.Tifrunner.gnm1.ann1.MWJV02 Arachis hypogaea HOM05D001373 ORTHO05D001330 2.5e-35 153.3 124 60.5
CSS0015733 Camellia sinensis var. sinensis HOM05D001373 ORTHO05D001330 2.5e-35 153.3 124 64.5
HanXRQChr05g0146901 Helianthus annuus HOM05D001373 ORTHO05D001330 2.5e-35 153.3 124 62.9
Aqoxy4G02811 Aquilegia oxysepala HOM05D001373 ORTHO05D001330 4.3e-35 152.5 124 62.9
Medtr1g092880 Medicago truncatula HOM05D001373 ORTHO05D001330 9.5e-35 151.4 124 62.9
Potri.008G022100 Populus trichocarpa HOM05D001373 ORTHO05D001330 9.5e-35 151.4 124 63.7
PGR142G2723 Punica granatum HOM05D001373 ORTHO05D001330 9.5e-35 151.4 124 62.1
Phvul.007G103300 Phaseolus vulgaris HOM05D001373 ORTHO05D001330 2.8e-34 149.8 124 62.9
Glyma.10G203600 Glycine max HOM05D001373 ORTHO05D001330 8.0e-34 148.3 124 63.7
Lj3A929G30 Lonicera japonica HOM05D001373 ORTHO05D001330 8.0e-34 148.3 130 63.8
Manes.10G058000 Manihot esculenta HOM05D001373 ORTHO05D001330 1.1e-33 147.9 123 63.4
Psat6g177600 Pisum sativum HOM05D001373 ORTHO05D001330 1.1e-33 147.9 124 60.5
EL10Ac6g14544 Beta vulgaris HOM05D001373 ORTHO05D001330 1.8e-33 147.1 124 62.9
AUR62002955 Chenopodium quinoa HOM05D001373 ORTHO05D001330 2.3e-33 146.7 124 62.9
ClCG08G008190 Citrullus lanatus HOM05D001373 ORTHO05D001330 2.3e-33 146.7 124 58.9
Hma1.2p1_0356F.1_g133990 Hydrangea macrophylla HOM05D001373 ORTHO05D001330 5.2e-33 145.6 124 60.5
VMungo0720G0665 Vigna mungo HOM05D001373 ORTHO05D001330 5.2e-33 145.6 124 62.9
EL10Ac6g14545 Beta vulgaris HOM05D001373 ORTHO05D001330 6.8e-33 145.2 131 61.8
Sed0004312 Sechium edule HOM05D001373 ORTHO05D001330 1.2e-32 144.4 127 57.5
Nn6g34953 Nelumbo nucifera HOM05D001373 ORTHO05D001330 2.0e-32 143.7 124 58.9
Sc04g0009080 Simmondsia chinensis HOM05D001373 ORTHO05D001330 2.0e-32 143.7 124 60.5
Eucgr.J00999 Eucalyptus grandis HOM05D001373 ORTHO05D001330 3.4e-32 142.9 124 60.5
Migut.F00904 Erythranthe guttata HOM05D001373 ORTHO05D001330 4.4e-32 142.5 124 62.1
PGR044G1873 Punica granatum HOM05D001373 ORTHO05D001330 7.5e-32 141.7 124 62.9
Ah.02g127310 Amaranthus hybridus HOM05D001373 ORTHO05D001330 1.7e-31 140.6 124 60.5
Medtr1g092870 Medicago truncatula HOM05D001373 ORTHO05D001330 2.2e-31 140.2 124 57.3
Hund06776 Selenicereus undatus HOM05D001373 ORTHO05D001330 2.2e-31 140.2 124 58.9
Glyma.10G203700 Glycine max HOM05D001373 ORTHO05D001330 2.9e-31 139.8 124 60.5
Sabra10G0185800 Salix brachista HOM05D001373 ORTHO05D005988 2.9e-31 139.8 124 60.5
Sabra08G0015000 Salix brachista HOM05D001373 ORTHO05D001330 6.4e-31 138.7 118 61.9
Eucgr.J00997 Eucalyptus grandis HOM05D001373 ORTHO05D001330 8.3e-31 138.3 124 58.9
EL10Ac6g14542 Beta vulgaris HOM05D001373 ORTHO05D001330 2.4e-30 136.7 134 57.5
MELO3C030268.2 Cucumis melo HOM05D001373 ORTHO05D001330 2.4e-30 136.7 124 54.8
CsaV3_6G004160 Cucumis sativus L. HOM05D001373 ORTHO05D001330 5.4e-30 135.6 124 54.8
SalBow6G4659 Salvia bowleyana HOM05D001373 ORTHO05D001330 4.6e-29 132.5 141 53.9
PSO384G1565 Papaver somniferum HOM05D001373 ORTHO05D001330 6.0e-29 132.1 124 56.5
Cc00_g18840 Coffea canephora HOM05D001373 ORTHO05D001330 1.0e-28 131.3 124 58.9
PGSC0003DMG400019465 Solanum tuberosum HOM05D001373 ORTHO05D001330 1.3e-28 131.0 124 58.9
PSO339G2300 Papaver somniferum HOM05D001373 ORTHO05D001330 1.7e-28 130.6 124 55.6
Sopen11g003050 Solanum pennellii HOM05D001373 ORTHO05D001330 2.3e-28 130.2 124 58.9
Solyc11g007130.2 Solanum lycopersicum HOM05D001373 ORTHO05D001330 3.0e-28 129.8 124 58.9
SGA_v2.0_scaffold68G22837 Striga asiatica HOM05D001373 ORTHO05D001330 3.9e-28 129.4 124 58.1
SGA_v2.0_scaffold13G06487 Striga asiatica HOM05D001373 ORTHO05D001330 5.0e-28 129.0 124 58.1
MSTRG.9091 Avicennia marina HOM05D001373 ORTHO05D001330 8.6e-28 128.3 124 57.3
Dinv09593 Davidia involucrata HOM05D001373 ORTHO05D001330 1.1e-27 127.9 133 55.6
Rhsim09G0143000 Rhododendron simsii HOM05D001373 ORTHO05D001330 1.1e-27 127.9 158 48.7
Oeu061779.1 Olea europaea HOM05D001373 ORTHO05D001330 1.5e-27 127.5 124 58.9
Peaxi162Scf00173g00074 Petunia axillaris HOM05D001373 ORTHO05D001330 1.9e-27 127.1 124 58.9
CAN.G730.35 Capsicum annuum HOM05D001373 ORTHO05D001330 2.5e-27 126.7 124 57.3
Cc00_g18820 Coffea canephora HOM05D001373 ORTHO05D001330 3.3e-27 126.3 124 57.3
Nitab4.5_0001437g0220 Nicotiana tabacum HOM05D001373 ORTHO05D001330 9.5e-27 124.8 124 58.1
Oeu026574.1 Olea europaea HOM05D001373 ORTHO05D001330 1.2e-26 124.4 134 52.2
Nitab4.5_0003774g0040 Nicotiana tabacum HOM05D001373 ORTHO05D001330 1.6e-26 124.0 124 57.3
unitig_899.g14475 Utricularia gibba HOM05D001373 ORTHO05D001330 2.6e-24 116.7 124 50.8
ATR0820G229 Amborella trichopoda HOM05D001373 ORTHO05D001330 4.4e-24 115.9 124 50.0
PGSC0003DMG400019466 Solanum tuberosum HOM05D001373 ORTHO05D001330 5.8e-24 115.5 124 50.8
EL10Ac6g13655 Beta vulgaris HOM05D001373 ORTHO05D001330 7.5e-24 115.2 130 50.0
CSS0017725 Camellia sinensis var. sinensis HOM05D001373 ORTHO05D001330 1.3e-23 114.4 99 59.6
DCAR_006344 Daucus carota HOM05D001373 ORTHO05D001330 1.7e-23 114.0 124 50.8
Solyc11g007140.2 Solanum lycopersicum HOM05D001373 ORTHO05D001330 3.2e-22 109.8 124 47.6
AUR62007760 Chenopodium quinoa HOM05D001373 ORTHO05D001330 7.1e-22 108.6 126 52.4
AUR62014014 Chenopodium quinoa HOM05D001373 ORTHO05D001330 1.6e-21 107.5 146 46.6
Sopen11g003060 Solanum pennellii HOM05D001373 ORTHO05D001330 2.1e-21 107.1 124 46.8
MBI17_g47109_MAGBIO Magnolia biondii HOM05D001373 ORTHO05D001330 1.3e-20 104.4 126 47.6
CDE08G1249 Ceratophyllum demersum HOM05D001373 ORTHO05D001330 1.7e-20 104.0 126 46.8
Actinidia31099 Actinidia chinensis HOM05D001373 ORTHO05D001330 5.1e-20 102.4 138 46.4
arahy.Tifrunner.gnm1.ann1.1NHG9F Arachis hypogaea HOM05D008215 ORTHO05D004366 1.9e-19 100.5 97 54.6
arahy.Tifrunner.gnm1.ann1.9FLE0S Arachis hypogaea HOM05D001373 ORTHO05D001330 2.8e-18 96.7 82 59.8
Os11g0151500 Oryza sativa ssp. japonica HOM05D001373 ORTHO05D001330 3.4e-16 89.7 125 41.6
SEGI_32913 Sequoiadendron giganteum HOM05D001373 ORTHO05D001330 5.8e-16 89.0 125 41.6
CDE06G1486 Ceratophyllum demersum HOM05D001373 ORTHO05D001330 9.9e-16 88.2 124 42.7
QL05p087852 Quercus lobata HOM05D000002 ORTHO05D000001 1.3e-15 87.8 62 77.4
QL07p041867 Quercus lobata HOM05D000002 ORTHO05D000001 1.3e-15 87.8 62 77.4
QL09p053670 Quercus lobata HOM05D000002 ORTHO05D000001 1.3e-15 87.8 62 77.4
QL12p040136 Quercus lobata HOM05D000002 ORTHO05D000001 1.7e-15 87.4 62 77.4
Potri.010G237300 Populus trichocarpa HOM05D001373 ORTHO05D001330 2.9e-15 86.7 85 57.6
QL07p004178 Quercus lobata HOM05D000002 ORTHO05D000001 2.9e-15 86.7 62 79.0
QL04p097278 Quercus lobata HOM05D000002 ORTHO05D000001 4.9e-15 85.9 62 74.2
QL06p020658 Quercus lobata HOM05D000002 ORTHO05D000001 4.9e-15 85.9 63 76.2
QL10p052423 Quercus lobata HOM05D000002 ORTHO05D000001 4.9e-15 85.9 62 74.2
QL11p016059 Quercus lobata HOM05D000002 ORTHO05D000001 4.9e-15 85.9 62 74.2
QL04p092122 Quercus lobata HOM05D000002 ORTHO05D000001 6.4e-15 85.5 62 71.0
QL05p086220 Quercus lobata HOM05D000002 ORTHO05D000001 6.4e-15 85.5 62 75.8
QL06p020360 Quercus lobata HOM05D000002 ORTHO05D000001 8.4e-15 85.1 62 77.4
QL09p045529 Quercus lobata HOM05D000002 ORTHO05D000001 1.4e-14 84.3 62 72.6
QL10p009369 Quercus lobata HOM05D000002 ORTHO05D000001 5.4e-14 82.4 62 71.0
QL08p048522 Quercus lobata HOM05D000002 ORTHO05D000001 9.2e-14 81.6 62 71.0
QL10p050039 Quercus lobata HOM05D000002 ORTHO05D000001 1.2e-13 81.3 62 74.2
QL04p093240 Quercus lobata HOM05D000002 ORTHO05D000001 2.1e-13 80.5 59 71.2
Peaxi162Scf00173g00824 Petunia axillaris HOM05D001373 ORTHO05D001330 4.6e-13 79.3 97 46.4
QL02p069342 Quercus lobata HOM05D000002 ORTHO05D000001 1.7e-12 77.4 62 66.1
QL05p070253 Quercus lobata HOM05D000002 ORTHO05D000001 2.3e-12 77.0 62 69.4
QL07p008129 Quercus lobata HOM05D000002 ORTHO05D000001 1.1e-11 74.7 57 75.4
MBI17_g46022_MAGBIO Magnolia biondii HOM05D001373 ORTHO05D001330 5.6e-11 72.4 101 42.6
QL09p018296 Quercus lobata HOM05D000002 ORTHO05D000001 8.1e-10 68.6 62 64.5
QL08p022873 Quercus lobata HOM05D000002 ORTHO05D000001 3.1e-09 66.6 48 72.9
AUR62005359 Chenopodium quinoa HOM05D001373 ORTHO05D001330 6.9e-09 65.5 85 44.7
Cc02_g09850 Coffea canephora HOM05D001373 ORTHO05D001330 1.2e-08 64.7 71 47.9
Cc02_g09870 Coffea canephora HOM05D001373 ORTHO05D001330 1.2e-08 64.7 71 50.7
Hund05151 Selenicereus undatus HOM05D001373 ORTHO05D001330 9.9e-08 61.6 135 31.1
SalBow6G0980 Salvia bowleyana HOM05D001373 ORTHO05D001330 2.4e-06 57.0 130 32.3
TAR625G0149 Trochodendron aralioides HOM05D001373 ORTHO05D001330 3.2e-06 56.6 140 31.4
DCAR_013896 Daucus carota HOM05D001373 ORTHO05D001330 4.2e-06 56.2 127 28.3


User provided reference genes

Program Settings