Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p043938 Quercus lobata HOM05D000097 ORTHO05D000041 8.5e-57 223.4 109 100.0
QL04p077793 Quercus lobata HOM05D027765 ORTHO05D000041 1.0e-25 120.2 198 40.9
QL04p044101 Quercus lobata HOM05D000097 ORTHO05D000041 3.5e-10 68.6 66 54.5
QL04p043491 Quercus lobata HOM05D000097 ORTHO05D000041 7.8e-10 67.4 69 49.3
CiPaw.14G031900 Carya illinoinensis HOM05D000097 ORTHO05D000041 1.0e-09 67.0 51 58.8
QL04p078289 Quercus lobata HOM05D000097 ORTHO05D009232 1.3e-09 66.6 69 52.2
CiPaw.14G030800 Carya illinoinensis HOM05D000097 ORTHO05D000041 2.3e-09 65.9 50 60.0
CiPaw.14G031500 Carya illinoinensis HOM05D000097 ORTHO05D000041 2.3e-09 65.9 50 60.0
CiPaw.14G030600 Carya illinoinensis HOM05D000097 ORTHO05D000041 3.0e-09 65.5 106 40.6
CiPaw.14G030900 Carya illinoinensis HOM05D000097 ORTHO05D000041 3.9e-09 65.1 50 58.0
QL04p077758 Quercus lobata HOM05D000097 ORTHO05D000041 5.0e-09 64.7 50 62.0
QL02p065418 Quercus lobata HOM05D000097 ORTHO05D000041 1.5e-08 63.2 49 53.1
QL04p047161 Quercus lobata HOM05D000097 ORTHO05D000041 1.5e-08 63.2 49 53.1
CiPaw.14G042100 Carya illinoinensis HOM05D000097 ORTHO05D000041 1.9e-08 62.8 53 52.8
CiPaw.14G125300 Carya illinoinensis HOM05D000097 ORTHO05D000041 1.9e-08 62.8 49 57.1
Haze_02789 Corylus avellana HOM05D000097 ORTHO05D000041 3.3e-08 62.0 49 51.0
Haze_03585 Corylus avellana HOM05D000097 ORTHO05D000041 4.3e-08 61.6 49 51.0
RcHm_v2.0_Chr1g0332901 Rosa chinensis HOM05D000097 ORTHO05D000041 5.6e-08 61.2 51 52.9
QL04p047446 Quercus lobata HOM05D000097 ORTHO05D000041 7.3e-08 60.8 49 51.0
Cfa011094 Carpinus fangiana HOM05D000097 ORTHO05D009232 1.2e-07 60.1 49 51.0
CiPaw.14G041600 Carya illinoinensis HOM05D000097 ORTHO05D000041 1.2e-07 60.1 50 56.0
CiPaw.14G031400 Carya illinoinensis HOM05D000097 ORTHO05D000041 1.6e-07 59.7 48 58.3
Haze_02562 Corylus avellana HOM05D000097 ORTHO05D009232 1.6e-07 59.7 50 50.0
Cfa008590 Carpinus fangiana HOM05D000097 ORTHO05D000041 2.1e-07 59.3 50 50.0
Haze_02788 Corylus avellana HOM05D000097 ORTHO05D000041 2.1e-07 59.3 49 53.1
QL04p047588 Quercus lobata HOM05D000097 ORTHO05D000041 2.1e-07 59.3 49 49.0
Haze_01014 Corylus avellana HOM05D000097 ORTHO05D000041 3.6e-07 58.5 50 50.0
CiPaw.14G031300 Carya illinoinensis HOM05D000097 ORTHO05D000041 4.7e-07 58.2 49 53.1
CiPaw.14G083200 Carya illinoinensis HOM05D000097 ORTHO05D000041 4.7e-07 58.2 66 48.5
CiPaw.01G097000 Carya illinoinensis HOM05D000097 ORTHO05D000041 6.2e-07 57.8 48 47.9
CiPaw.07G088800 Carya illinoinensis HOM05D000097 ORTHO05D000041 6.2e-07 57.8 51 49.0
Haze_02554 Corylus avellana HOM05D000097 ORTHO05D000041 8.0e-07 57.4 50 56.0
Haze_02555 Corylus avellana HOM05D000097 ORTHO05D000041 8.0e-07 57.4 50 56.0
CiPaw.01G104300 Carya illinoinensis HOM05D000097 ORTHO05D000041 1.1e-06 57.0 48 47.9
FAN14G3669 Fragaria x ananassa HOM05D000097 ORTHO05D000041 1.1e-06 57.0 50 52.0
CiPaw.01G096900 Carya illinoinensis HOM05D000097 ORTHO05D009232 1.4e-06 56.6 49 46.9
CiPaw.12G023200 Carya illinoinensis HOM05D000097 ORTHO05D000041 1.4e-06 56.6 81 43.2
CiPaw.14G032400 Carya illinoinensis HOM05D000097 ORTHO05D000041 1.4e-06 56.6 51 54.9
CiPaw.14G045800 Carya illinoinensis HOM05D000097 ORTHO05D000041 1.8e-06 56.2 56 50.0
Haze_05205 Corylus avellana HOM05D000097 ORTHO05D000041 1.8e-06 56.2 50 50.0
Haze_07767 Corylus avellana HOM05D000596 ORTHO05D001497 1.8e-06 56.2 148 25.0
Haze_26476 Corylus avellana HOM05D000097 ORTHO05D000041 1.8e-06 56.2 49 49.0
Haze_26477 Corylus avellana HOM05D000097 ORTHO05D000041 1.8e-06 56.2 49 49.0
CiPaw.12G014700 Carya illinoinensis HOM05D000097 ORTHO05D009232 2.3e-06 55.8 50 50.0
CiPaw.14G082500 Carya illinoinensis HOM05D000097 ORTHO05D000041 2.3e-06 55.8 49 57.1
MD09G1088100 Malus domestica HOM05D000097 ORTHO05D000041 2.3e-06 55.8 50 46.0
MD09G1088000 Malus domestica HOM05D000097 ORTHO05D000041 3.1e-06 55.5 50 46.0
Prupe.2G080900 Prunus persica HOM05D000097 ORTHO05D000041 3.1e-06 55.5 49 51.0
Prupe.2G081100 Prunus persica HOM05D000097 ORTHO05D000041 3.1e-06 55.5 49 51.0
Cfa019375 Carpinus fangiana HOM05D000596 ORTHO05D001497 4.0e-06 55.1 49 49.0
Cfa019379 Carpinus fangiana HOM05D000097 ORTHO05D000041 4.0e-06 55.1 49 49.0
Haze_02551 Corylus avellana HOM05D000097 ORTHO05D000041 4.0e-06 55.1 58 48.3
Haze_06676 Corylus avellana HOM05D000097 ORTHO05D000041 4.0e-06 55.1 50 50.0
Prupe.2G033900 Prunus persica HOM05D000097 ORTHO05D000041 4.0e-06 55.1 49 51.0
FAN02G1506 Fragaria x ananassa HOM05D000097 ORTHO05D000041 6.8e-06 54.3 50 48.0
CiPaw.14G031700 Carya illinoinensis HOM05D000097 ORTHO05D009232 8.9e-06 53.9 49 53.1
FAN09G3828 Fragaria x ananassa HOM05D000442 ORTHO05D001979 8.9e-06 53.9 50 50.0


User provided reference genes

Program Settings