Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p043907 Quercus lobata HOM05D000097 ORTHO05D009232 2.6e-75 285.4 156 100.0
QL08p060780 Quercus lobata HOM05D000097 ORTHO05D009232 3.3e-46 188.7 103 88.3
QL04p078301 Quercus lobata HOM05D000097 ORTHO05D009232 6.7e-23 111.3 90 62.2
QL04p078372 Quercus lobata HOM05D000097 ORTHO05D009232 6.3e-21 104.8 92 58.7
QL04p044640 Quercus lobata HOM05D000097 ORTHO05D009232 3.8e-18 95.5 89 53.9
Haze_02559 Corylus avellana HOM05D000097 ORTHO05D009232 6.1e-16 88.2 91 49.5
Haze_02556 Corylus avellana HOM05D000097 ORTHO05D009232 8.0e-16 87.8 87 50.6
CiPaw.12G014700 Carya illinoinensis HOM05D000097 ORTHO05D009232 1.0e-15 87.4 80 52.5
Cfa019375 Carpinus fangiana HOM05D000596 ORTHO05D001497 6.7e-15 84.7 103 40.8
Cfa019379 Carpinus fangiana HOM05D000097 ORTHO05D000041 6.7e-15 84.7 103 40.8
Cfa010359 Carpinus fangiana HOM05D000097 ORTHO05D009232 4.4e-14 82.0 82 50.0
Cfa017761 Carpinus fangiana HOM05D024057 ORTHO05D009232 5.7e-14 81.6 80 46.2
Haze_01722 Corylus avellana HOM05D000097 ORTHO05D009232 5.7e-14 81.6 91 50.5
Haze_02562 Corylus avellana HOM05D000097 ORTHO05D009232 5.7e-14 81.6 95 47.4
Haze_02792 Corylus avellana HOM05D000097 ORTHO05D009232 5.7e-14 81.6 85 45.9
Cfa011094 Carpinus fangiana HOM05D000097 ORTHO05D009232 7.4e-14 81.3 85 44.7
FvH4_5g19322 Fragaria vesca HOM05D000097 ORTHO05D009232 7.4e-14 81.3 90 46.7
QL04p077954 Quercus lobata HOM05D000097 ORTHO05D009232 9.7e-14 80.9 89 44.9
Cfa015092 Carpinus fangiana HOM05D000097 ORTHO05D009232 1.7e-13 80.1 80 50.0
Haze_07767 Corylus avellana HOM05D000596 ORTHO05D001497 1.7e-13 80.1 88 43.2
Haze_02571 Corylus avellana HOM05D000097 ORTHO05D009232 2.8e-13 79.3 85 44.7
Cfa011097 Carpinus fangiana HOM05D000097 ORTHO05D009232 4.8e-13 78.6 80 46.2
CiPaw.01G096800 Carya illinoinensis HOM05D000097 ORTHO05D009232 8.2e-13 77.8 108 41.7
Cfa000775 Carpinus fangiana HOM05D000097 ORTHO05D009232 1.1e-12 77.4 88 47.7
CiPaw.01G097000 Carya illinoinensis HOM05D000097 ORTHO05D000041 1.4e-12 77.0 89 46.1
Prupe.2G080300 Prunus persica HOM05D000097 ORTHO05D000041 1.4e-12 77.0 93 45.2
MD09G1088100 Malus domestica HOM05D000097 ORTHO05D000041 1.8e-12 76.6 80 45.0
QL02p065412 Quercus lobata HOM05D000097 ORTHO05D009232 2.4e-12 76.3 87 46.0
Haze_02588 Corylus avellana HOM05D000097 ORTHO05D000041 3.1e-12 75.9 83 45.8
Cfa011240 Carpinus fangiana HOM05D000097 ORTHO05D009232 4.1e-12 75.5 82 46.3
Cfa012990 Carpinus fangiana HOM05D000097 ORTHO05D009232 5.3e-12 75.1 85 44.7
Prupe.3G237000 Prunus persica HOM05D000097 ORTHO05D009232 9.1e-12 74.3 78 47.4
Cfa012991 Carpinus fangiana HOM05D000097 ORTHO05D009232 1.2e-11 73.9 85 43.5
Prupe.4G282500 Prunus persica HOM05D000097 ORTHO05D000041 1.2e-11 73.9 79 45.6
Prupe.3G237300 Prunus persica HOM05D000097 ORTHO05D000041 1.6e-11 73.6 78 46.2
FvH4_5g36321 Fragaria vesca HOM05D000097 ORTHO05D009232 2.0e-11 73.2 81 43.2
MD17G1077800 Malus domestica HOM05D000097 ORTHO05D000041 2.0e-11 73.2 80 45.0
MD17G1078100 Malus domestica HOM05D000097 ORTHO05D000041 2.0e-11 73.2 80 45.0
TWI15G0201 Tripterygium wilfordii HOM05D000097 ORTHO05D000041 2.0e-11 73.2 80 43.8
CiPaw.14G042100 Carya illinoinensis HOM05D000097 ORTHO05D000041 2.6e-11 72.8 80 42.5
CiPaw.13G052500 Carya illinoinensis HOM05D000097 ORTHO05D000041 4.5e-11 72.0 88 44.3
Thecc.03G016000 Theobroma cacao HOM05D000097 ORTHO05D009232 4.5e-11 72.0 90 43.3
Thecc.03G016700 Theobroma cacao HOM05D000097 ORTHO05D009232 7.7e-11 71.2 87 42.5
Thecc.03G017100 Theobroma cacao HOM05D000097 ORTHO05D000041 7.7e-11 71.2 91 41.8
CiPaw.13G114700 Carya illinoinensis HOM05D000097 ORTHO05D000041 2.9e-10 69.3 100 39.0
TWI15G0307 Tripterygium wilfordii HOM05D000097 ORTHO05D000041 2.9e-10 69.3 98 39.8
CiPaw.13G052400 Carya illinoinensis HOM05D000097 ORTHO05D000041 3.8e-10 68.9 89 44.9
FvH4_6g44572 Fragaria vesca HOM05D000097 ORTHO05D009232 3.8e-10 68.9 98 41.8
FAN14G1826 Fragaria x ananassa HOM05D000097 ORTHO05D009232 3.8e-10 68.9 98 41.8
Prupe.3G237500 Prunus persica HOM05D000097 ORTHO05D000041 3.8e-10 68.9 78 44.9
CiPaw.01G096900 Carya illinoinensis HOM05D000097 ORTHO05D009232 5.0e-10 68.6 110 40.0
RcHm_v2.0_Chr7g0243171 Rosa chinensis HOM05D012044 ORTHO05D009232 5.0e-10 68.6 90 38.9
FvH4_6g44660 Fragaria vesca HOM05D000097 ORTHO05D000041 6.5e-10 68.2 89 43.8
FvH4_6g45154 Fragaria vesca HOM05D000097 ORTHO05D000041 6.5e-10 68.2 86 43.0
Thecc.03G016100 Theobroma cacao HOM05D000097 ORTHO05D000041 1.1e-09 67.4 91 41.8
Haze_02566 Corylus avellana HOM05D000097 ORTHO05D000041 1.5e-09 67.0 87 42.5
Haze_02587 Corylus avellana HOM05D000097 ORTHO05D000041 1.5e-09 67.0 80 45.0
FAN08G2061 Fragaria x ananassa HOM05D000097 ORTHO05D009232 1.5e-09 67.0 85 40.0
MD17G1101100 Malus domestica HOM05D000097 ORTHO05D000041 1.5e-09 67.0 89 40.4
Prupe.3G237400 Prunus persica HOM05D000097 ORTHO05D009232 1.5e-09 67.0 82 45.1
FvH4_5g36310 Fragaria vesca HOM05D012044 ORTHO05D009232 2.5e-09 66.2 85 40.0
FAN13G0017 Fragaria x ananassa HOM05D000097 ORTHO05D009232 2.5e-09 66.2 87 37.9
CiPaw.01G104800 Carya illinoinensis HOM05D000097 ORTHO05D000041 3.2e-09 65.9 110 37.3
FAN02G1935 Fragaria x ananassa HOM05D000097 ORTHO05D000041 3.2e-09 65.9 82 42.7
MD17G1100900 Malus domestica HOM05D000097 ORTHO05D009232 3.2e-09 65.9 88 42.0
TAR625G1425 Trochodendron aralioides HOM05D000097 ORTHO05D000041 5.5e-09 65.1 105 38.1
FAN14G3669 Fragaria x ananassa HOM05D000097 ORTHO05D000041 9.4e-09 64.3 87 41.4
Prupe.2G082900 Prunus persica HOM05D000097 ORTHO05D000041 9.4e-09 64.3 81 44.4
Haze_02551 Corylus avellana HOM05D000097 ORTHO05D000041 1.2e-08 63.9 90 43.3
FAN09G3828 Fragaria x ananassa HOM05D000442 ORTHO05D001979 1.6e-08 63.5 86 40.7
FvH4_6g44620 Fragaria vesca HOM05D000097 ORTHO05D009232 2.1e-08 63.2 92 41.3
FAN04G1606 Fragaria x ananassa HOM05D000097 ORTHO05D000041 4.7e-08 62.0 86 36.0
FAN04G1975 Fragaria x ananassa HOM05D001790 ORTHO05D007425 4.7e-08 62.0 86 36.0
RcHm_v2.0_Chr1g0338991 Rosa chinensis HOM05D000097 ORTHO05D000041 6.1e-08 61.6 79 40.5
Manes.07G088650 Manihot esculenta HOM05D000097 ORTHO05D000041 8.0e-08 61.2 80 42.5
FvH4_6g44650 Fragaria vesca HOM05D000097 ORTHO05D009232 1.4e-07 60.5 78 41.0
FvH4_6g51440 Fragaria vesca HOM05D000097 ORTHO05D000041 1.4e-07 60.5 82 42.7
Cfa011242 Carpinus fangiana HOM05D000097 ORTHO05D000041 1.8e-07 60.1 97 36.1
Manes.07G088800 Manihot esculenta HOM05D000097 ORTHO05D000041 1.8e-07 60.1 84 39.3
RcHm_v2.0_Chr2g0162691 Rosa chinensis HOM05D000097 ORTHO05D009232 2.3e-07 59.7 79 43.0
RcHm_v2.0_Chr7g0242551 Rosa chinensis HOM05D000097 ORTHO05D000041 2.3e-07 59.7 86 36.0
FAN02G3279 Fragaria x ananassa HOM05D000097 ORTHO05D000041 3.0e-07 59.3 82 40.2
Manes.07G086500 Manihot esculenta HOM05D000097 ORTHO05D000041 3.0e-07 59.3 80 42.5
FvH4_6g45153 Fragaria vesca HOM05D000097 ORTHO05D000041 4.0e-07 58.9 86 39.5
FAN09G2628 Fragaria x ananassa HOM05D000097 ORTHO05D000041 4.0e-07 58.9 82 41.5
FAN14G0264 Fragaria x ananassa HOM05D000097 ORTHO05D000041 4.0e-07 58.9 82 41.5
FAN18G4446 Fragaria x ananassa HOM05D000097 ORTHO05D000041 4.0e-07 58.9 86 34.9
Manes.07G088350 Manihot esculenta HOM05D000097 ORTHO05D000041 4.0e-07 58.9 80 41.2
RcHm_v2.0_Chr7g0243041 Rosa chinensis HOM05D012044 ORTHO05D009232 6.7e-07 58.2 90 35.6
MD03G1133900 Malus domestica HOM05D000097 ORTHO05D000041 8.8e-07 57.8 84 40.5
Manes.07G089101 Manihot esculenta HOM05D000097 ORTHO05D009232 8.8e-07 57.8 80 42.5
Prupe.2G033800 Prunus persica HOM05D000097 ORTHO05D009232 1.5e-06 57.0 87 41.4
QL04p044088 Quercus lobata HOM05D000097 ORTHO05D009232 1.5e-06 57.0 78 42.3
Haze_01757 Corylus avellana HOM05D000097 ORTHO05D009232 2.0e-06 56.6 58 43.1
Actinidia09829 Actinidia chinensis HOM05D000097 ORTHO05D000041 3.3e-06 55.8 80 37.5
PSO832G2950 Papaver somniferum HOM05D000097 ORTHO05D000041 3.3e-06 55.8 80 33.8
Rhsim10G0137600 Rhododendron simsii HOM05D000097 ORTHO05D000041 3.3e-06 55.8 80 41.2
Dinv25833 Davidia involucrata HOM05D000097 ORTHO05D000041 4.4e-06 55.5 80 42.5
Manes.07G087101 Manihot esculenta HOM05D000097 ORTHO05D000041 4.4e-06 55.5 91 38.5
Duzib106G0395 Durio zibethinus HOM05D000097 ORTHO05D000041 5.7e-06 55.1 88 37.5
Sabra08G0015500 Salix brachista HOM05D000097 ORTHO05D000041 5.7e-06 55.1 80 37.5
Sabra08G0015800 Salix brachista HOM05D000097 ORTHO05D000041 5.7e-06 55.1 80 37.5
QL04p047175 Quercus lobata HOM05D000097 ORTHO05D009232 7.5e-06 54.7 65 43.1
RcHm_v2.0_Chr2g0161801 Rosa chinensis HOM05D000097 ORTHO05D009232 7.5e-06 54.7 77 37.7
FAN04G0035 Fragaria x ananassa HOM05D000097 ORTHO05D009232 9.7e-06 54.3 63 41.3
QL04p069561 Quercus lobata HOM05D000097 ORTHO05D009232 9.7e-06 54.3 58 50.0


User provided reference genes

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