Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p041477 Quercus lobata HOM05D008140 ORTHO05D009650 9.3e-84 313.5 162 100.0
Cfa011231 Carpinus fangiana HOM05D008140 ORTHO05D009650 3.0e-42 175.6 135 68.1
Haze_02597 Corylus avellana HOM05D008140 ORTHO05D009650 7.4e-41 171.0 129 69.0
CiPaw.13G036700 Carya illinoinensis HOM05D008140 ORTHO05D009650 6.3e-32 141.4 156 58.3
RcHm_v2.0_Chr1g0333151 Rosa chinensis HOM05D008140 ORTHO05D009650 9.1e-23 110.9 160 45.0
RcHm_v2.0_Chr1g0333141 Rosa chinensis HOM05D008140 ORTHO05D009650 1.2e-22 110.5 160 44.4
MD07G1068400 Malus domestica HOM05D008140 ORTHO05D009650 1.3e-21 107.1 142 45.8
QL04p042101 Quercus lobata HOM05D008140 ORTHO05D009650 1.7e-21 106.7 133 48.1
Duzib106G0172 Durio zibethinus HOM05D008140 ORTHO05D009650 3.8e-21 105.5 134 44.8
Prupe.2G086100 Prunus persica HOM05D008140 ORTHO05D009650 3.2e-20 102.4 153 45.1
Cfa011234 Carpinus fangiana HOM05D008140 ORTHO05D009650 4.2e-20 102.1 145 42.8
FvH4_7g05940 Fragaria vesca HOM05D008140 ORTHO05D009650 4.2e-20 102.1 165 44.2
FAN06G2722 Fragaria x ananassa HOM05D008140 ORTHO05D009650 4.2e-20 102.1 165 44.2
FAN10G4346 Fragaria x ananassa HOM05D008140 ORTHO05D009650 7.2e-20 101.3 165 44.2
FAN03G1479 Fragaria x ananassa HOM05D008140 ORTHO05D009650 9.4e-20 100.9 165 44.2
Haze_02596 Corylus avellana HOM05D008140 ORTHO05D009650 1.6e-19 100.1 133 42.9
Thecc.10G110900 Theobroma cacao HOM05D008140 ORTHO05D009650 1.6e-19 100.1 160 42.5
Sabra10G0182500 Salix brachista HOM05D008140 ORTHO05D009650 3.6e-19 99.0 158 44.3
Cfa011233 Carpinus fangiana HOM05D008140 ORTHO05D009650 4.0e-18 95.5 152 42.8
FAN01G1993 Fragaria x ananassa HOM05D008140 ORTHO05D009650 5.2e-18 95.1 164 42.1
Potri.008G025200 Populus trichocarpa HOM05D008140 ORTHO05D009650 9.8e-17 90.9 154 42.2
Haze_02595 Corylus avellana HOM05D008140 ORTHO05D009650 1.7e-16 90.1 123 40.7
Potri.010G235400 Populus trichocarpa HOM05D008140 ORTHO05D009650 2.2e-16 89.7 160 39.4
CiPaw.13G036800 Carya illinoinensis HOM05D008140 ORTHO05D009650 3.7e-16 89.0 152 43.4
Lalb_Chr06g0170171 Lupinus albus HOM05D008140 ORTHO05D009650 6.3e-16 88.2 139 42.4
Potri.008G025100 Populus trichocarpa HOM05D008140 ORTHO05D009650 5.4e-15 85.1 154 40.9
Manes.07G090200 Manihot esculenta HOM05D008140 ORTHO05D009650 1.2e-14 84.0 118 47.5
Ciclev10033301m.g Citrus clementina HOM05D008140 ORTHO05D009650 2.0e-14 83.2 120 42.5
COL.COLO4_06812 Corchorus olitorius HOM05D008140 ORTHO05D009650 7.7e-14 81.3 158 39.9
Cfa011235 Carpinus fangiana HOM05D008140 ORTHO05D009650 1.0e-13 80.9 103 42.7
TAR636G0417 Trochodendron aralioides HOM05D008140 ORTHO05D009650 2.9e-13 79.3 125 41.6
Sabra08G0016900 Salix brachista HOM05D008140 ORTHO05D009650 5.0e-13 78.6 149 39.6
QL04p041480 Quercus lobata HOM05D008140 ORTHO05D009650 1.9e-12 76.6 146 41.8
Rhsim03G0105800 Rhododendron simsii HOM05D008140 ORTHO05D009650 2.5e-12 76.3 103 46.6
QL04p041665 Quercus lobata HOM05D008140 ORTHO05D009650 9.5e-12 74.3 101 46.5
CANSAT56G1901 Cannabis sativa HOM05D008140 ORTHO05D009650 1.0e-10 70.9 124 37.9
CiPaw.14G029100 Carya illinoinensis HOM05D008140 ORTHO05D009650 1.0e-10 70.9 147 34.0
Peaxi162Scf00244g00075 Petunia axillaris HOM05D009634 ORTHO05D009650 1.0e-10 70.9 129 38.8
Nitab4.5_0001850g0010 Nicotiana tabacum HOM05D009634 ORTHO05D009650 6.8e-10 68.2 124 39.5
Peaxi162Scf00244g00074 Petunia axillaris HOM05D009634 ORTHO05D009650 2.0e-09 66.6 91 40.7
THA.LOC104803183 Tarenaya hassleriana HOM05D008140 ORTHO05D009650 2.0e-09 66.6 97 41.2
Nitab4.5_0002878g0050 Nicotiana tabacum HOM05D009634 ORTHO05D009650 4.4e-09 65.5 88 45.5
TWI38G0562 Tripterygium wilfordii HOM05D008140 ORTHO05D009650 9.8e-09 64.3 122 40.2
Nitab4.5_0002878g0010 Nicotiana tabacum HOM05D009634 ORTHO05D009650 1.3e-08 63.9 120 37.5
Nitab4.5_0012334g0020 Nicotiana tabacum HOM05D009634 ORTHO05D009650 1.7e-08 63.5 93 41.9
CiPaw.13G036900 Carya illinoinensis HOM05D008140 ORTHO05D009650 6.3e-08 61.6 147 34.0
THA.LOC104803169 Tarenaya hassleriana HOM05D008140 ORTHO05D009650 6.3e-08 61.6 145 31.0
CAN.G135.81 Capsicum annuum HOM05D009634 ORTHO05D009650 1.4e-07 60.5 94 39.4
BolC4t22473H Brassica oleracea HOM05D008140 ORTHO05D009650 1.8e-07 60.1 145 31.7
AL4G36090 Arabidopsis lyrata HOM05D008140 ORTHO05D009650 2.4e-07 59.7 144 29.9
SalBow6G5252 Salvia bowleyana HOM05D009634 ORTHO05D009650 3.1e-07 59.3 92 39.1
C04p08800 Brassica napus HOM05D008140 ORTHO05D009650 4.1e-07 58.9 138 31.9
PGSC0003DMG400027311 Solanum tuberosum HOM05D009634 ORTHO05D009650 4.1e-07 58.9 143 34.3
PGSC0003DMG400027312 Solanum tuberosum HOM05D009634 ORTHO05D009650 4.1e-07 58.9 111 36.0
A03p21600 Brassica napus HOM05D008140 ORTHO05D009650 5.4e-07 58.5 157 31.2
BraA03t11396Z Brassica rapa HOM05D008140 ORTHO05D009650 5.4e-07 58.5 157 31.2
Carub.0004s2081 Capsella rubella HOM05D008140 ORTHO05D009650 5.4e-07 58.5 143 30.1
Oeu026565.1 Olea europaea HOM05D009634 ORTHO05D009650 5.4e-07 58.5 115 37.4
Sp4g21180 Schrenkiella parvula HOM05D008140 ORTHO05D009650 9.2e-07 57.8 145 33.1
AT2G38790 Arabidopsis thaliana HOM05D008140 ORTHO05D009650 1.2e-06 57.4 148 29.1
BcaC02g12023 Brassica carinata HOM05D008140 ORTHO05D009650 1.2e-06 57.4 138 31.2
SalBow6G2478 Salvia bowleyana HOM05D009634 ORTHO05D009650 1.2e-06 57.4 110 40.0
A05p07360 Brassica napus HOM05D008140 ORTHO05D009650 1.6e-06 57.0 138 31.2
BraA05t19701Z Brassica rapa HOM05D008140 ORTHO05D009650 1.6e-06 57.0 138 31.2
Nitab4.5_0002878g0060 Nicotiana tabacum HOM05D009634 ORTHO05D009650 1.6e-06 57.0 93 40.9
Oeu059859.1 Olea europaea HOM05D009634 ORTHO05D009650 2.0e-06 56.6 117 35.0
Solyc11g007520.1 Solanum lycopersicum HOM05D009634 ORTHO05D009650 2.7e-06 56.2 143 34.3
Sopen11g003360 Solanum pennellii HOM05D009634 ORTHO05D009650 2.7e-06 56.2 142 34.5
BcaB02g09155 Brassica carinata HOM05D008140 ORTHO05D009650 4.5e-06 55.5 137 29.9
BcaB02g09156 Brassica carinata HOM05D008140 ORTHO05D009650 4.5e-06 55.5 137 29.9
Sc09g0005560 Simmondsia chinensis HOM05D008140 ORTHO05D009650 5.9e-06 55.1 94 35.1
A05p07380 Brassica napus HOM05D008140 ORTHO05D009650 7.7e-06 54.7 138 30.4
C03p25590 Brassica napus HOM05D008140 ORTHO05D009650 7.7e-06 54.7 137 30.7
BolC3t14947H Brassica oleracea HOM05D008140 ORTHO05D009650 7.7e-06 54.7 137 30.7
BraA05t19703Z Brassica rapa HOM05D008140 ORTHO05D009650 7.7e-06 54.7 138 30.4
CARHR133500 Cardamine hirsuta HOM05D008140 ORTHO05D009650 7.7e-06 54.7 165 30.3


User provided reference genes

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