Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p040032 Quercus lobata HOM05D004478 ORTHO05D007440 4.4e-133 478.0 251 100.0
CiPaw.14G027200 Carya illinoinensis HOM05D004478 ORTHO05D007440 3.6e-111 405.2 245 87.3
GSVIVG01027657001 Vitis vinifera HOM05D004478 ORTHO05D007440 4.9e-108 394.8 246 85.4
Cfa011194 Carpinus fangiana HOM05D004478 ORTHO05D007440 4.1e-107 391.7 245 84.1
Prupe.2G141700 Prunus persica HOM05D004478 ORTHO05D007440 9.2e-107 390.6 246 82.9
FAN06G3638 Fragaria x ananassa HOM05D004478 ORTHO05D007440 2.3e-105 386.0 238 82.4
RcHm_v2.0_Chr1g0342581 Rosa chinensis HOM05D004478 ORTHO05D007440 2.3e-105 386.0 230 85.2
FAN10G0184 Fragaria x ananassa HOM05D004478 ORTHO05D007440 6.6e-105 384.4 238 81.9
MD07G1008800 Malus domestica HOM05D004478 ORTHO05D007440 6.6e-105 384.4 248 79.8
MD02G1313300 Malus domestica HOM05D004478 ORTHO05D007440 1.5e-104 383.3 248 79.4
FvH4_7g07690 Fragaria vesca HOM05D004478 ORTHO05D007440 1.9e-104 382.9 249 80.3
PGR042G4004 Punica granatum HOM05D004478 ORTHO05D007440 4.3e-104 381.7 252 79.8
FAN03G2702 Fragaria x ananassa HOM05D004478 ORTHO05D007440 9.6e-104 380.6 248 80.6
Glyma.10G279100 Glycine max HOM05D004478 ORTHO05D007440 1.8e-102 376.3 240 80.8
arahy.Tifrunner.gnm1.ann1.MXE7NW Arachis hypogaea HOM05D004478 ORTHO05D007440 2.6e-101 372.5 232 82.3
arahy.Tifrunner.gnm1.ann1.R3KQ80 Arachis hypogaea HOM05D004478 ORTHO05D007440 2.6e-101 372.5 232 82.3
Gohir.A04G045800 Gossypium hirsutum HOM05D004478 ORTHO05D007440 3.4e-101 372.1 250 81.2
Gohir.D05G336900 Gossypium hirsutum HOM05D004478 ORTHO05D007440 4.4e-101 371.7 250 80.8
TAR629G2829 Trochodendron aralioides HOM05D004478 ORTHO05D007440 4.4e-101 371.7 245 79.6
Ciclev10018542m.g Citrus clementina HOM05D004478 ORTHO05D007440 5.8e-101 371.3 230 83.5
Gorai.009G361000 Gossypium raimondii HOM05D004478 ORTHO05D007440 9.9e-101 370.5 250 80.4
Glyma.20G110600 Glycine max HOM05D004478 ORTHO05D007440 1.3e-100 370.2 232 81.9
arahy.Tifrunner.gnm1.ann1.W3JVU2 Arachis hypogaea HOM05D004478 ORTHO05D007440 3.8e-100 368.6 232 81.5
Manes.05G047400 Manihot esculenta HOM05D004478 ORTHO05D007440 4.9e-100 368.2 248 79.0
TWI59G0724 Tripterygium wilfordii HOM05D004478 ORTHO05D007440 8.4e-100 367.5 231 82.3
Phvul.007G022200 Phaseolus vulgaris HOM05D004478 ORTHO05D007440 1.4e-99 366.7 232 81.5
Lalb_Chr02g0146291 Lupinus albus HOM05D004478 ORTHO05D007440 1.9e-99 366.3 247 78.5
VMungo0720G2491 Vigna mungo HOM05D004478 ORTHO05D007440 3.2e-99 365.5 235 80.9
Duzib213G0292 Durio zibethinus HOM05D004478 ORTHO05D007440 4.2e-99 365.2 249 79.9
Lj5g0020792 Lotus japonicus HOM05D004478 ORTHO05D007440 5.4e-99 364.8 248 77.4
arahy.Tifrunner.gnm1.ann1.ZTQI5E Arachis hypogaea HOM05D004478 ORTHO05D007440 1.2e-98 363.6 232 80.2
Aa31LG10G14990 Aethionema arabicum HOM05D004478 ORTHO05D007440 2.7e-98 362.5 245 78.4
TWI14G0506 Tripterygium wilfordii HOM05D004478 ORTHO05D007440 3.5e-98 362.1 246 78.5
CSS0018497 Camellia sinensis var. sinensis HOM05D004478 ORTHO05D007440 6.0e-98 361.3 253 76.7
Nn6g34058 Nelumbo nucifera HOM05D004478 ORTHO05D007440 6.0e-98 361.3 248 75.4
Potri.014G067400 Populus trichocarpa HOM05D004478 ORTHO05D007440 1.3e-97 360.1 237 79.7
Thecc.01G379300 Theobroma cacao HOM05D004478 ORTHO05D007440 1.3e-97 360.1 228 83.3
TPR.G2420 Trifolium pratense HOM05D004478 ORTHO05D007440 1.7e-97 359.8 246 76.8
Thhalv10005754m.g Eutrema salsugineum HOM05D004478 ORTHO05D007440 8.7e-97 357.5 243 79.0
Actinidia12243 Actinidia chinensis HOM05D004478 ORTHO05D007440 1.1e-96 357.1 249 77.1
AT3G60740 Arabidopsis thaliana HOM05D004478 ORTHO05D007440 1.1e-96 357.1 242 78.1
Sp5g02510 Schrenkiella parvula HOM05D004478 ORTHO05D007440 1.9e-96 356.3 251 76.9
Ca_25666_v3 Cicer arietinum L. HOM05D004478 ORTHO05D007440 2.5e-96 355.9 247 74.9
Actinidia12201 Actinidia chinensis HOM05D004478 ORTHO05D007440 3.3e-96 355.5 233 79.0
PSO782G0861 Papaver somniferum HOM05D004478 ORTHO05D007440 5.6e-96 354.8 247 74.5
AL5G43050 Arabidopsis lyrata HOM05D004478 ORTHO05D007440 2.8e-95 352.4 242 77.3
THA.LOC104827612 Tarenaya hassleriana HOM05D004478 ORTHO05D007440 2.8e-95 352.4 248 74.2
CsaV3_6G006310 Cucumis sativus L. HOM05D004478 ORTHO05D007440 3.6e-95 352.1 231 77.1
AUR62013659 Chenopodium quinoa HOM05D004478 ORTHO05D007440 4.8e-95 351.7 231 78.8
MBI04_g11448_MAGBIO Magnolia biondii HOM05D004478 ORTHO05D007440 4.8e-95 351.7 233 76.8
AUR62004186 Chenopodium quinoa HOM05D004478 ORTHO05D007440 8.1e-95 350.9 231 78.8
COL.COLO4_12522 Corchorus olitorius HOM05D004478 ORTHO05D007440 8.1e-95 350.9 250 75.6
MELO3C022488.2 Cucumis melo HOM05D004478 ORTHO05D007440 1.1e-94 350.5 231 76.6
CARHR171130 Cardamine hirsuta HOM05D004478 ORTHO05D007440 1.8e-94 349.7 242 76.9
Carub.0005s2747 Capsella rubella HOM05D004478 ORTHO05D007440 2.4e-94 349.4 243 76.1
Sed0027727 Sechium edule HOM05D004478 ORTHO05D007440 2.4e-94 349.4 231 77.1
Sopen01g036830 Solanum pennellii HOM05D004478 ORTHO05D007440 3.1e-94 349.0 240 75.0
Aqoxy7G00707 Aquilegia oxysepala HOM05D004478 ORTHO05D007440 9.0e-94 347.4 248 75.4
Lj9C568T10 Lonicera japonica HOM05D004478 ORTHO05D018907 2.0e-93 346.3 250 74.4
Solyc01g091090.4 Solanum lycopersicum HOM05D004478 ORTHO05D007440 2.6e-93 345.9 248 73.8
MSTRG.4901 Avicennia marina HOM05D004478 ORTHO05D007440 3.4e-93 345.5 246 74.0
HanXRQChr04g0122511 Helianthus annuus HOM05D004478 ORTHO05D007440 3.4e-93 345.5 244 75.0
Rhsim07G0029300 Rhododendron simsii HOM05D004478 ORTHO05D007440 7.6e-93 344.4 224 79.0
ClCG06G000530 Citrullus lanatus HOM05D004478 ORTHO05D007440 2.9e-92 342.4 231 75.8
Sabra14G0047400 Salix brachista HOM05D004478 ORTHO05D007440 3.8e-92 342.0 262 71.8
CAN.G911.6 Capsicum annuum HOM05D004478 ORTHO05D007440 4.9e-92 341.7 245 73.1
BcaC02g10175 Brassica carinata HOM05D004478 ORTHO05D007440 6.4e-92 341.3 245 75.1
C04p31950 Brassica napus HOM05D004478 ORTHO05D007440 6.4e-92 341.3 245 75.1
BolC4t24748H Brassica oleracea HOM05D004478 ORTHO05D007440 6.4e-92 341.3 245 75.1
EL10Ac1g00864 Beta vulgaris HOM05D004478 ORTHO05D007440 8.4e-92 340.9 230 75.7
Medtr1g112130 Medicago truncatula HOM05D004478 ORTHO05D007440 8.4e-92 340.9 236 74.2
Nitab4.5_0010730g0030 Nicotiana tabacum HOM05D004478 ORTHO05D007440 1.4e-91 340.1 239 74.9
Carub.0002s1115 Capsella rubella HOM05D004478 ORTHO05D007440 1.9e-91 339.7 247 74.1
Ah.05g174780 Amaranthus hybridus HOM05D004478 ORTHO05D007440 4.6e-90 335.1 243 72.4
Lsat_1_v5_gn_7_9321 Lactuca sativa HOM05D004478 ORTHO05D007440 1.0e-89 334.0 245 72.7
vmacro13419 Vaccinium macrocarpon HOM05D004478 ORTHO05D007440 1.3e-89 333.6 233 75.1
DCAR_015895 Daucus carota HOM05D004478 ORTHO05D007440 1.7e-89 333.2 229 74.2
ECA236G4615 Erigeron canadensis HOM05D004478 ORTHO05D007440 1.7e-89 333.2 231 74.9
Psat6g230960 Pisum sativum HOM05D004478 ORTHO05D007440 3.9e-89 332.0 246 69.9
Cc02_g24170 Coffea canephora HOM05D004478 ORTHO05D007440 1.1e-88 330.5 243 71.6
SalBow5G5434 Salvia bowleyana HOM05D004478 ORTHO05D007440 1.1e-88 330.5 230 73.9
SGA_v2.0_scaffold43G16502 Striga asiatica HOM05D004478 ORTHO05D007440 1.1e-88 330.5 254 70.5
ATR0829G158 Amborella trichopoda HOM05D004478 ORTHO05D007440 1.5e-88 330.1 232 71.1
Hund27372 Selenicereus undatus HOM05D004478 ORTHO05D007440 1.9e-88 329.7 245 71.8
Oeu064473.1 Olea europaea HOM05D004478 ORTHO05D007440 3.3e-88 328.9 255 69.0
BraA04t15865Z Brassica rapa HOM05D004478 ORTHO05D007440 1.6e-87 326.6 245 72.7
A04p01470 Brassica napus HOM05D004478 ORTHO05D007440 4.8e-87 325.1 245 72.7
Peaxi162Scf00013g02924 Petunia axillaris HOM05D004478 ORTHO05D007440 8.1e-87 324.3 260 67.7
Haze_02652 Corylus avellana HOM05D004478 ORTHO05D007440 1.2e-85 320.5 182 90.7
SHI13530 Sapria himalayana HOM05D004478 ORTHO05D007440 1.3e-84 317.0 244 68.0
unitig_32.g11469 Utricularia gibba HOM05D004478 ORTHO05D007440 4.2e-83 312.0 230 69.1
CDE12G0470 Ceratophyllum demersum HOM05D004478 ORTHO05D007440 7.1e-83 311.2 232 70.3
Atru.chr5.277 Acer truncatum HOM05D004478 ORTHO05D007440 2.1e-82 309.7 182 87.9
HPP92_014468 Vanilla planifolia HOM05D004478 ORTHO05D007440 1.1e-78 297.4 247 62.8
Nitab4.5_0000252g0220 Nicotiana tabacum HOM05D004478 ORTHO05D007440 3.4e-77 292.4 226 68.6
SEGI_29392 Sequoiadendron giganteum HOM05D004478 ORTHO05D007440 1.4e-75 287.0 240 62.5
AL2G22100 Arabidopsis lyrata HOM05D004478 ORTHO05D007440 1.8e-73 280.0 181 80.1
MD07G1009100 Malus domestica HOM05D004478 ORTHO05D007440 3.1e-70 269.2 164 82.9
Eucgr.E01450 Eucalyptus grandis HOM05D004478 ORTHO05D007440 6.9e-70 268.1 161 85.7
Nitab4.5_0000457g0060 Nicotiana tabacum HOM05D004478 ORTHO05D007440 1.7e-68 263.5 164 80.5
Cpa.g.sc145.17 Carica papaya HOM05D004478 ORTHO05D007440 8.4e-68 261.2 248 64.1
Duzib213G0739 Durio zibethinus HOM05D004478 ORTHO05D007440 2.1e-66 256.5 249 62.2
Sc02g0002670 Simmondsia chinensis HOM05D004478 ORTHO05D007440 4.1e-62 242.3 159 78.6
Mapoly0039s0061 Marchantia polymorpha HOM05D004478 ORTHO05D007440 3.6e-50 202.6 228 46.5
SMO147G0207 Selaginella moellendorffii HOM05D004478 ORTHO05D007440 2.3e-49 199.9 228 46.9
AagrBONN_evm.TU.Sc2ySwM_344.164 Anthoceros agrestis HOM05D004478 ORTHO05D007440 2.2e-44 183.3 249 41.8
Migut.N01621 Erythranthe guttata HOM05D004478 ORTHO05D007440 1.8e-38 163.7 143 62.9
CARHR186390 Cardamine hirsuta HOM05D004478 ORTHO05D018907 2.9e-36 156.4 111 73.0
Dinv43688 Davidia involucrata HOM05D004478 ORTHO05D018907 1.1e-35 154.5 110 73.6
CBR_g24365 Chara braunii HOM05D004478 ORTHO05D007440 6.1e-34 148.7 239 38.1
Pp3c2_18070 Physcomitrium patens HOM05D004478 ORTHO05D007440 1.4e-33 147.5 169 48.5
Dinv43687 Davidia involucrata HOM05D004478 ORTHO05D007440 1.4e-30 137.5 82 85.4
MCO09G490 Micromonas commoda HOM05D004478 ORTHO05D007440 2.2e-28 130.2 197 38.1
Cre12.g490250 Chlamydomonas reinhardtii HOM05D004478 ORTHO05D007440 8.0e-26 121.7 227 36.1
AUR62044221 Chenopodium quinoa HOM05D004478 ORTHO05D007440 4.3e-19 99.4 69 73.9
PRCOL_00002890 Prasinoderma coloniale HOM05D004478 ORTHO05D007440 5.6e-19 99.0 211 31.3
Haze_02651 Corylus avellana HOM05D004478 ORTHO05D018907 9.2e-14 81.6 64 68.8
Manes.05G127200 Manihot esculenta HOM05D004478 ORTHO05D018907 7.5e-08 62.0 74 52.7
AUR62044220 Chenopodium quinoa HOM05D004478 ORTHO05D018907 1.9e-06 57.4 41 70.7
Cfa025481 Carpinus fangiana HOM05D004478 ORTHO05D121864 7.0e-06 55.5 190 26.8


User provided reference genes

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