Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p037061 Quercus lobata HOM05D006638 ORTHO05D008246 5.0e-134 481.1 242 100.0
Haze_02520 Corylus avellana HOM05D006638 ORTHO05D008246 1.5e-93 346.7 215 82.8
CiPaw.14G025400 Carya illinoinensis HOM05D006638 ORTHO05D008246 2.7e-87 325.9 193 84.5
Prupe.2G137100 Prunus persica HOM05D006638 ORTHO05D008246 6.6e-86 321.2 231 71.4
RcHm_v2.0_Chr1g0349031 Rosa chinensis HOM05D006638 ORTHO05D008246 6.6e-86 321.2 210 76.2
Dinv44116 Davidia involucrata HOM05D006638 ORTHO05D008246 4.8e-84 315.1 219 74.4
FvH4_7g11040 Fragaria vesca HOM05D006638 ORTHO05D008246 4.8e-84 315.1 231 71.0
Atru.chr5.234 Acer truncatum HOM05D006638 ORTHO05D008246 6.2e-84 314.7 229 71.6
FAN10G1288 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.4e-83 313.5 248 66.9
FAN06G4764 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.8e-83 313.2 231 70.6
FAN03G2254 Fragaria x ananassa HOM05D006638 ORTHO05D008246 4.0e-83 312.0 231 70.6
FAN10G2039 Fragaria x ananassa HOM05D006638 ORTHO05D008246 5.3e-83 311.6 248 66.5
MD07G1114500 Malus domestica HOM05D006638 ORTHO05D008246 2.6e-82 309.3 234 68.4
Glyma.03G033200 Glycine max HOM05D006638 ORTHO05D008246 3.4e-82 308.9 239 68.6
Cpa.g.sc49.148 Carica papaya HOM05D006638 ORTHO05D008246 9.9e-82 307.4 211 74.4
CANSAT56G0739 Cannabis sativa HOM05D006638 ORTHO05D008246 1.7e-81 306.6 225 70.7
COL.COLO4_12484 Corchorus olitorius HOM05D006638 ORTHO05D008246 3.8e-81 305.4 211 73.0
Lalb_Chr07g0190301 Lupinus albus HOM05D006638 ORTHO05D008246 3.8e-81 305.4 231 68.8
Sabra01G0171300 Salix brachista HOM05D006638 ORTHO05D008246 6.4e-81 304.7 224 72.3
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 6.4e-81 304.7 214 73.8
Hma1.2p1_0001F.1_g001240 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 8.4e-81 304.3 202 75.7
TAR636G0703 Trochodendron aralioides HOM05D006638 ORTHO05D008246 8.4e-81 304.3 213 72.3
arahy.Tifrunner.gnm1.ann1.WQW1G6 Arachis hypogaea HOM05D006638 ORTHO05D008246 1.9e-80 303.1 184 80.4
Lj3g0022109 Lotus japonicus HOM05D006638 ORTHO05D008246 2.4e-80 302.8 237 65.4
Potri.004G225600 Populus trichocarpa HOM05D006638 ORTHO05D008246 3.2e-80 302.4 212 75.0
Ca_19858_v3 Cicer arietinum L. HOM05D006638 ORTHO05D008246 9.3e-80 300.8 242 66.1
Nn2g12739 Nelumbo nucifera HOM05D006638 ORTHO05D008246 9.3e-80 300.8 219 69.4
Rhsim05G0215700 Rhododendron simsii HOM05D006638 ORTHO05D008246 7.9e-79 297.7 229 68.6
arahy.Tifrunner.gnm1.ann1.B645Y9 Arachis hypogaea HOM05D006638 ORTHO05D008246 1.7e-78 296.6 191 77.5
Aqoxy7G00747 Aquilegia oxysepala HOM05D006638 ORTHO05D008246 3.0e-78 295.8 195 74.4
Thecc.01G384300 Theobroma cacao HOM05D006638 ORTHO05D008246 3.3e-77 292.4 222 68.5
PSO170G5140 Papaver somniferum HOM05D006638 ORTHO05D008246 4.3e-77 292.0 244 64.3
TWI23G0519 Tripterygium wilfordii HOM05D006638 ORTHO05D008246 4.3e-77 292.0 227 69.2
Atru.BG.68.p Acer truncatum HOM05D006638 ORTHO05D008246 5.6e-77 291.6 176 80.7
CsaV3_3G007360 Cucumis sativus L. HOM05D006638 ORTHO05D008246 9.6e-77 290.8 223 70.9
Duzib133G1291 Durio zibethinus HOM05D006638 ORTHO05D008246 1.3e-76 290.4 227 65.6
Psat0s3685g0120 Pisum sativum HOM05D006638 ORTHO05D008246 1.6e-76 290.0 230 65.2
Aa31LG1G2420 Aethionema arabicum HOM05D006638 ORTHO05D008246 4.8e-76 288.5 214 67.8
Gorai.008G106400 Gossypium raimondii HOM05D006638 ORTHO05D008246 4.8e-76 288.5 232 65.9
Gohir.A12G095100 Gossypium hirsutum HOM05D006638 ORTHO05D008246 8.1e-76 287.7 232 65.9
DCAR_029874 Daucus carota HOM05D006638 ORTHO05D008246 1.1e-75 287.3 188 78.2
BcaC07g41715 Brassica carinata HOM05D006638 ORTHO05D008246 4.0e-75 285.4 218 66.5
ClCG05G000210 Citrullus lanatus HOM05D006638 ORTHO05D008246 4.0e-75 285.4 224 68.3
Medtr4g027430 Medicago truncatula HOM05D006638 ORTHO05D008246 4.0e-75 285.4 239 64.9
Lj7A537T49 Lonicera japonica HOM05D006638 ORTHO05D008246 1.5e-74 283.5 198 72.7
C08p47510 Brassica napus HOM05D006638 ORTHO05D008246 2.0e-74 283.1 218 66.1
BolC8t52292H Brassica oleracea HOM05D006638 ORTHO05D008246 7.6e-74 281.2 218 66.1
THA.LOC104809455 Tarenaya hassleriana HOM05D006638 ORTHO05D008246 7.6e-74 281.2 218 67.0
Eucgr.H00160 Eucalyptus grandis HOM05D006638 ORTHO05D008246 1.3e-73 280.4 178 79.8
Carub.0001s1192 Capsella rubella HOM05D006638 ORTHO05D008246 2.9e-73 279.3 218 65.6
Migut.N01611 Erythranthe guttata HOM05D006638 ORTHO05D008246 2.9e-73 279.3 232 62.9
BcaC07g42567 Brassica carinata HOM05D006638 ORTHO05D008246 6.4e-73 278.1 218 65.6
CARHR012550 Cardamine hirsuta HOM05D006638 ORTHO05D008246 6.4e-73 278.1 219 65.8
AL1G23530 Arabidopsis lyrata HOM05D006638 ORTHO05D008246 1.9e-72 276.6 218 64.7
BraA09t41748Z Brassica rapa HOM05D006638 ORTHO05D008246 2.4e-72 276.2 218 64.2
Lj1g0022300 Lotus japonicus HOM05D006638 ORTHO05D008246 4.2e-72 275.4 237 61.6
HanXRQChr12g0384211 Helianthus annuus HOM05D006638 ORTHO05D008246 7.1e-72 274.6 215 68.4
AT1G12244 Arabidopsis thaliana HOM05D006638 ORTHO05D008246 9.3e-72 274.2 217 64.5
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 1.2e-71 273.9 187 74.9
SalBow1G6174 Salvia bowleyana HOM05D006638 ORTHO05D008246 2.1e-71 273.1 184 72.8
Solyc01g090880.3 Solanum lycopersicum HOM05D006638 ORTHO05D008246 2.1e-71 273.1 217 65.4
ECA234G0121 Erigeron canadensis HOM05D006638 ORTHO05D008246 2.7e-71 272.7 182 74.7
MSTRG.4914 Avicennia marina HOM05D006638 ORTHO05D008246 6.0e-71 271.6 184 71.2
EL10Ac1g00836 Beta vulgaris HOM05D006638 ORTHO05D008246 7.9e-71 271.2 230 64.3
Thhalv10008640m.g Eutrema salsugineum HOM05D006638 ORTHO05D008246 1.8e-70 270.0 218 63.8
PGSC0003DMG400025975 Solanum tuberosum HOM05D006638 ORTHO05D008246 1.8e-70 270.0 191 70.2
Nitab4.5_0011151g0010 Nicotiana tabacum HOM05D006638 ORTHO05D008246 3.0e-70 269.2 191 70.2
PGR142G0596 Punica granatum HOM05D006638 ORTHO05D008246 3.9e-70 268.9 258 58.1
VMungo0331G0589 Vigna mungo HOM05D006638 ORTHO05D008246 8.7e-70 267.7 191 70.7
SGA_v2.0_scaffold43G16517 Striga asiatica HOM05D006638 ORTHO05D008246 1.1e-69 267.3 229 61.1
CAN.G1872.5 Capsicum annuum HOM05D006638 ORTHO05D008246 1.5e-69 266.9 202 66.3
Sc23g0003780 Simmondsia chinensis HOM05D006638 ORTHO05D008246 1.5e-69 266.9 225 64.9
Sopen01g036620 Solanum pennellii HOM05D006638 ORTHO05D008246 5.6e-69 265.0 217 62.7
Nitab4.5_0000859g0190 Nicotiana tabacum HOM05D006638 ORTHO05D008246 1.3e-68 263.8 214 63.6
Hund17047 Selenicereus undatus HOM05D006638 ORTHO05D008246 1.3e-68 263.8 181 71.8
unitig_748.g7114 Utricularia gibba HOM05D006638 ORTHO05D008246 1.3e-68 263.8 182 69.2
Lsat_1_v5_gn_4_45501 Lactuca sativa HOM05D006638 ORTHO05D008246 3.7e-68 262.3 229 64.6
TAR629G0886 Trochodendron aralioides HOM05D006638 ORTHO05D008246 2.9e-65 252.7 244 60.2
Cc02_g24450 Coffea canephora HOM05D006638 ORTHO05D008246 1.1e-64 250.8 224 62.5
MELO3C005958.2 Cucumis melo HOM05D006638 ORTHO05D008246 1.4e-64 250.4 319 49.8
CDE02G4315 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 7.1e-64 248.1 187 67.4
HPP92_022319 Vanilla planifolia HOM05D006638 ORTHO05D008246 1.3e-62 243.8 177 71.8
HPP92_022327 Vanilla planifolia HOM05D006638 ORTHO05D008246 1.5e-61 240.4 177 70.6
Actinidia33482 Actinidia chinensis HOM05D006638 ORTHO05D008246 2.8e-60 236.1 191 68.6
Peaxi162Scf00803g00218 Petunia axillaris HOM05D006638 ORTHO05D008246 9.0e-59 231.1 211 57.3
CSS0019813 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 2.6e-58 229.6 231 58.0
Sp1g10860 Schrenkiella parvula HOM05D006638 ORTHO05D008246 3.4e-58 229.2 218 57.8
CSS0044007 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 6.5e-57 224.9 229 57.6
Manes.17G011000 Manihot esculenta HOM05D006638 ORTHO05D008246 2.5e-56 223.0 150 76.7
Phvul.010G071600 Phaseolus vulgaris HOM05D006638 ORTHO05D008246 2.1e-55 219.9 130 81.5
Gohir.D12G097700 Gossypium hirsutum HOM05D006638 ORTHO05D008246 2.2e-52 209.9 170 68.2
Ah.01g003990 Amaranthus hybridus HOM05D006638 ORTHO05D008246 2.0e-50 203.4 139 74.1
TPR.G27556 Trifolium pratense HOM05D006638 ORTHO05D008246 2.0e-50 203.4 184 62.5
Os10g0555200 Oryza sativa ssp. japonica HOM05D006638 ORTHO05D008246 1.0e-49 201.1 184 61.4
ATR0317G113 Amborella trichopoda HOM05D006638 ORTHO05D008246 1.9e-48 196.8 145 67.6
MBI04_g09497_MAGBIO Magnolia biondii HOM05D006638 ORTHO05D008246 1.9e-48 196.8 185 57.8
Sed0019776 Sechium edule HOM05D006638 ORTHO05D008246 4.2e-48 195.7 127 75.6
Hma1.2p1_0001F.1_g001250 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 6.3e-44 181.8 119 77.3
Zm00001eb023510 Zea mays HOM05D006638 ORTHO05D008246 4.1e-43 179.1 145 66.9
CSS0006996 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 1.2e-42 177.6 120 75.8
vmacro21035 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 1.5e-42 177.2 116 75.9
CSS0041268 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 9.4e-40 167.9 120 74.2
Medtr2g064690 Medicago truncatula HOM05D006638 ORTHO05D008246 3.6e-39 166.0 129 68.2
Oeu000021.1 Olea europaea HOM05D006638 ORTHO05D008246 6.1e-39 165.2 109 78.0
Mapoly0010s0011 Marchantia polymorpha HOM05D006638 ORTHO05D008246 3.9e-38 162.5 155 54.8
AagrBONN_evm.TU.Sc2ySwM_228.3890 Anthoceros agrestis HOM05D006638 ORTHO05D008246 2.0e-37 160.2 198 48.5
Rhsim01G0151400 Rhododendron simsii HOM05D006638 ORTHO05D008246 3.7e-36 156.0 106 72.6
FAN01G0965 Fragaria x ananassa HOM05D006638 ORTHO05D008246 4.1e-35 152.5 98 81.6
Pp3c1_23680 Physcomitrium patens HOM05D006638 ORTHO05D008246 2.0e-34 150.2 158 50.6
TPR.G4994 Trifolium pratense HOM05D006954 ORTHO05D008246 1.8e-27 127.1 87 70.1
SMO340G0150 Selaginella moellendorffii HOM05D006638 ORTHO05D008246 8.5e-25 118.2 168 42.3
Pp3c1_23620 Physcomitrium patens HOM05D006638 ORTHO05D008246 8.8e-22 108.2 133 46.6
vmacro21034 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 9.1e-19 98.2 56 76.8
CBR_g17705 Chara braunii HOM05D006638 ORTHO05D008246 8.5e-17 91.7 160 37.5
Medtr2g064700 Medicago truncatula HOM05D006638 ORTHO05D008246 2.7e-15 86.7 83 55.4
Lsat_1_v5_gn_6_51920 Lactuca sativa HOM05D006638 ORTHO05D008246 3.6e-15 86.3 58 70.7
Medtr2g064670 Medicago truncatula HOM05D006638 ORTHO05D008246 5.7e-13 79.0 91 51.6
RcHm_v2.0_Chr1g0349061 Rosa chinensis HOM05D006638 ORTHO05D008246 5.4e-11 72.4 45 68.9
Solyc12g035620.2 Solanum lycopersicum HOM05D006638 ORTHO05D008246 1.3e-09 67.8 48 62.5
MELO3C033920.2 Cucumis melo HOM05D006638 ORTHO05D008246 5.0e-09 65.9 121 41.3
Lsat_1_v5_gn_1_125220 Lactuca sativa HOM05D006638 ORTHO05D008246 1.9e-08 63.9 95 47.4
SEGI_24864 Sequoiadendron giganteum HOM05D006638 ORTHO05D008246 2.3e-06 57.0 46 56.5


User provided reference genes

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